Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:46:22 (236122): wrapper (7.7.26015): starting
19:46:22 (236122): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 19:46:23] Arguments: --nthreads 8
[2026-01-29 19:46:23] Threads: 8
[2026-01-29 19:46:23] Checking for CVMFS
[2026-01-29 19:46:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 19:46:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 19:46:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 19:46:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 19:46:23] 2.13.3.0 11771 122902 254276 155660 1 628 18139759 32935936 28193 16776704 0 709094213 99.518 895816318 37592 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-29 19:46:23] CVMFS is ok
[2026-01-29 19:46:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 19:46:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 19:46:23] Further information can be found at the LHC@home message board.
[2026-01-29 19:46:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 19:46:23] Checking for apptainer binary...
[2026-01-29 19:46:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 19:46:23] Running /usr/bin/apptainer --version
[2026-01-29 19:46:23] apptainer version 1.4.5-2.el9
[2026-01-29 19:46:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 19:46:23] c7-2-14.aglt2.org
[2026-01-29 19:46:23] apptainer works
[2026-01-29 19:46:23] Set ATHENA_PROC_NUMBER=8
[2026-01-29 19:46:23] Set ATHENA_CORE_NUMBER=8
[2026-01-29 19:46:23] Starting ATLAS job with PandaID=6979592419
[2026-01-29 19:46:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 22:17:07]  *** The last 200 lines of the pilot log: ***
[2026-01-29 22:17:07] 2026-01-30 03:15:56,397 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6979592419/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 22:17:07] 2026-01-30 03:15:56,397 | INFO     | extracted standard info from prmon json
[2026-01-29 22:17:07] 2026-01-30 03:15:56,398 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 22:17:07] 2026-01-30 03:15:56,398 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 22:17:07] 2026-01-30 03:15:56,398 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 22:17:07] 2026-01-30 03:15:56,398 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 22:17:07] 2026-01-30 03:15:56,400 | INFO     | fitting pss+swap vs Time
[2026-01-29 22:17:07] 2026-01-30 03:15:56,401 | INFO     | sum of square deviations: 984951630.9387786
[2026-01-29 22:17:07] 2026-01-30 03:15:56,401 | INFO     | sum of deviations: -34528609993.32653
[2026-01-29 22:17:07] 2026-01-30 03:15:56,401 | INFO     | mean x: 1769738481.0204082
[2026-01-29 22:17:07] 2026-01-30 03:15:56,401 | INFO     | mean y: 2544874.775510204
[2026-01-29 22:17:07] 2026-01-30 03:15:56,402 | INFO     | intersect: 62042758710.5491
[2026-01-29 22:17:07] 2026-01-30 03:15:56,402 | INFO     | chi2: 3.7151899430428434
[2026-01-29 22:17:07] 2026-01-30 03:15:56,402 | INFO     | sum of square deviations: 887825143.4366174
[2026-01-29 22:17:07] 2026-01-30 03:15:56,403 | INFO     | sum of deviations: -5932179219.535212
[2026-01-29 22:17:07] 2026-01-30 03:15:56,403 | INFO     | mean x: 1769738328.5211267
[2026-01-29 22:17:07] 2026-01-30 03:15:56,403 | INFO     | mean y: 2589178.8450704226
[2026-01-29 22:17:07] 2026-01-30 03:15:56,403 | INFO     | intersect: 11827445699.387505
[2026-01-29 22:17:07] 2026-01-30 03:15:56,403 | INFO     | chi2: 1.6331132531808974
[2026-01-29 22:17:07] 2026-01-30 03:15:56,403 | INFO     | current chi2=1.6331132531808974 (change=56.04226760359573 %)
[2026-01-29 22:17:07] 2026-01-30 03:15:56,403 | INFO     | sum of square deviations: 797303430.9343061
[2026-01-29 22:17:07] 2026-01-30 03:15:56,404 | INFO     | sum of deviations: -5545729032.262774
[2026-01-29 22:17:07] 2026-01-30 03:15:56,404 | INFO     | mean x: 1769738176.0218978
[2026-01-29 22:17:07] 2026-01-30 03:15:56,404 | INFO     | mean y: 2589830.0875912406
[2026-01-29 22:17:07] 2026-01-30 03:15:56,404 | INFO     | intersect: 12312192424.88324
[2026-01-29 22:17:07] 2026-01-30 03:15:56,404 | INFO     | chi2: 1.6321392687098313
[2026-01-29 22:17:07] 2026-01-30 03:15:56,405 | INFO     | current chi2=1.6321392687098313 (change=0.05963973834448009 %)
[2026-01-29 22:17:07] 2026-01-30 03:15:56,405 | INFO     | right removable region: 136
[2026-01-29 22:17:07] 2026-01-30 03:15:56,405 | INFO     | sum of square deviations: 887823313.4366174
[2026-01-29 22:17:07] 2026-01-30 03:15:56,405 | INFO     | sum of deviations: -53610681215.507034
[2026-01-29 22:17:07] 2026-01-30 03:15:56,405 | INFO     | mean x: 1769738633.5211267
[2026-01-29 22:17:07] 2026-01-30 03:15:56,406 | INFO     | mean y: 2574230.1690140846
[2026-01-29 22:17:07] 2026-01-30 03:15:56,406 | INFO     | intersect: 106867186006.59938
[2026-01-29 22:17:07] 2026-01-30 03:15:56,406 | INFO     | chi2: 2.3836847685047546
[2026-01-29 22:17:07] 2026-01-30 03:15:56,406 | INFO     | current chi2=2.3836847685047546 (change=35.8394912494716 %)
[2026-01-29 22:17:07] 2026-01-30 03:15:56,406 | INFO     | sum of square deviations: 797299770.9343061
[2026-01-29 22:17:07] 2026-01-30 03:15:56,407 | INFO     | sum of deviations: -49687704161.21899
[2026-01-29 22:17:07] 2026-01-30 03:15:56,407 | INFO     | mean x: 1769738786.0218978
[2026-01-29 22:17:07] 2026-01-30 03:15:56,407 | INFO     | mean y: 2567515.0729927006
[2026-01-29 22:17:07] 2026-01-30 03:15:56,407 | INFO     | intersect: 110292649675.06934
[2026-01-29 22:17:07] 2026-01-30 03:15:56,407 | INFO     | chi2: 2.372308320921249
[2026-01-29 22:17:07] 2026-01-30 03:15:56,407 | INFO     | current chi2=2.372308320921249 (change=0.47726309006210993 %)
[2026-01-29 22:17:07] 2026-01-30 03:15:56,407 | INFO     | left removable region: 20
[2026-01-29 22:17:07] 2026-01-30 03:15:56,407 | INFO     | sum of square deviations: 483980590.92241406
[2026-01-29 22:17:07] 2026-01-30 03:15:56,408 | INFO     | sum of deviations: -8653664755.7069
[2026-01-29 22:17:07] 2026-01-30 03:15:56,408 | INFO     | mean x: 1769738755.525862
[2026-01-29 22:17:07] 2026-01-30 03:15:56,408 | INFO     | mean y: 2589361.5689655175
[2026-01-29 22:17:07] 2026-01-30 03:15:56,408 | INFO     | intersect: 31645853952.643887
[2026-01-29 22:17:07] 2026-01-30 03:15:56,408 | INFO     | chi2: 0.11435780721712648
[2026-01-29 22:17:07] 2026-01-30 03:15:56,409 | INFO     | current memory leak: -17.88 B/s (using 116 data points, chi2=0.11)
[2026-01-29 22:17:07] 2026-01-30 03:15:56,409 | INFO     | could have reported an average CPU frequency of 3216 MHz (8 samples)
[2026-01-29 22:17:07] 2026-01-30 03:15:56,409 | INFO     | ..............................
[2026-01-29 22:17:07] 2026-01-30 03:15:56,409 | INFO     | . Timing measurements:
[2026-01-29 22:17:07] 2026-01-30 03:15:56,409 | INFO     | . get job = 0 s
[2026-01-29 22:17:07] 2026-01-30 03:15:56,409 | INFO     | . initial setup = 8 s
[2026-01-29 22:17:07] 2026-01-30 03:15:56,409 | INFO     | . payload setup = 7 s
[2026-01-29 22:17:07] 2026-01-30 03:15:56,409 | INFO     | . stage-in = 0 s
[2026-01-29 22:17:07] 2026-01-30 03:15:56,409 | INFO     | . payload execution = 8925 s
[2026-01-29 22:17:07] 2026-01-30 03:15:56,409 | INFO     | . stage-out = 1 s
[2026-01-29 22:17:07] 2026-01-30 03:15:56,409 | INFO     | . log creation = 0 s
[2026-01-29 22:17:07] 2026-01-30 03:15:56,410 | INFO     | ..............................
[2026-01-29 22:17:07] 2026-01-30 03:15:56,722 | INFO     | 
[2026-01-29 22:17:07] 2026-01-30 03:15:56,726 | INFO     | job summary report
[2026-01-29 22:17:07] 2026-01-30 03:15:56,726 | INFO     | --------------------------------------------------
[2026-01-29 22:17:07] 2026-01-30 03:15:56,726 | INFO     | PanDA job id: 6979592419
[2026-01-29 22:17:07] 2026-01-30 03:15:56,726 | INFO     | task id: 48312946
[2026-01-29 22:17:07] 2026-01-30 03:15:56,726 | INFO     | errors: (none)
[2026-01-29 22:17:07] 2026-01-30 03:15:56,730 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 22:17:07] 2026-01-30 03:15:56,730 | INFO     | pilot state: finished 
[2026-01-29 22:17:07] 2026-01-30 03:15:56,730 | INFO     | transexitcode: 0
[2026-01-29 22:17:07] 2026-01-30 03:15:56,730 | INFO     | exeerrorcode: 0
[2026-01-29 22:17:07] 2026-01-30 03:15:56,730 | INFO     | exeerrordiag: 
[2026-01-29 22:17:07] 2026-01-30 03:15:56,730 | INFO     | exitcode: 0
[2026-01-29 22:17:07] 2026-01-30 03:15:56,730 | INFO     | exitmsg: OK
[2026-01-29 22:17:07] 2026-01-30 03:15:56,730 | INFO     | cpuconsumptiontime: 38090 s
[2026-01-29 22:17:07] 2026-01-30 03:15:56,730 | INFO     | nevents: 400
[2026-01-29 22:17:07] 2026-01-30 03:15:56,730 | INFO     | neventsw: 0
[2026-01-29 22:17:07] 2026-01-30 03:15:56,730 | INFO     | pid: 245999
[2026-01-29 22:17:07] 2026-01-30 03:15:56,735 | INFO     | pgrp: 245999
[2026-01-29 22:17:07] 2026-01-30 03:15:56,735 | INFO     | corecount: 8
[2026-01-29 22:17:07] 2026-01-30 03:15:56,735 | INFO     | event service: False
[2026-01-29 22:17:07] 2026-01-30 03:15:56,735 | INFO     | sizes: {0: 2277972, 1: 2278433, 11: 2278433, 8936: 2306654, 8937: 2306653, 8939: 2315707, 8940: 2315891, 8941: 2316085}
[2026-01-29 22:17:07] 2026-01-30 03:15:56,735 | INFO     | --------------------------------------------------
[2026-01-29 22:17:07] 2026-01-30 03:15:56,735 | INFO     | 
[2026-01-29 22:17:07] 2026-01-30 03:15:56,735 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-29 22:17:07] 2026-01-30 03:15:56,785 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,785 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,785 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,785 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,785 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | job 6979592419 has completed (purged errors)
[2026-01-29 22:17:07] 2026-01-30 03:15:56,786 | INFO     | overall cleanup function is called
[2026-01-29 22:17:07] 2026-01-30 03:15:57,429 | INFO     | number of running child processes to parent process 245999: 1
[2026-01-29 22:17:07] 2026-01-30 03:15:57,430 | INFO     | maximum number of monitored processes: 6
[2026-01-29 22:17:07] 2026-01-30 03:15:57,430 | INFO     | aborting job monitoring since job object (job id=6979592419) has expired
[2026-01-29 22:17:07] 2026-01-30 03:15:57,817 | INFO     | --- collectZombieJob: --- 10, [245999]
[2026-01-29 22:17:07] 2026-01-30 03:15:57,817 | INFO     | zombie collector waiting for pid 245999
[2026-01-29 22:17:07] 2026-01-30 03:15:57,817 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 22:17:07] 2026-01-30 03:15:57,817 | INFO     | collected zombie processes
[2026-01-29 22:17:07] 2026-01-30 03:15:57,817 | INFO     | will attempt to kill all subprocesses of pid=245999
[2026-01-29 22:17:07] 2026-01-30 03:15:59,533 | INFO     | process IDs to be killed: [245999] (in reverse order)
[2026-01-29 22:17:07] 2026-01-30 03:15:59,926 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 22:17:07] 2026-01-30 03:15:59,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 22:17:07] 2026-01-30 03:15:59,954 | INFO     | did not find any defunct processes belonging to 245999
[2026-01-29 22:17:07] 2026-01-30 03:15:59,976 | INFO     | did not find any defunct processes belonging to 245999
[2026-01-29 22:17:07] 2026-01-30 03:15:59,977 | INFO     | ready for new job
[2026-01-29 22:17:07] 2026-01-30 03:15:59,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 22:17:07] 2026-01-30 03:15:59,979 | INFO     | **************************************
[2026-01-29 22:17:07] 2026-01-30 03:15:59,979 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 22:17:07] 2026-01-30 03:15:59,979 | INFO     | **************************************
[2026-01-29 22:17:07] 2026-01-30 03:15:59,979 | INFO     | 
[2026-01-29 22:17:07] 2026-01-30 03:16:00,007 | INFO     | architecture information:
[2026-01-29 22:17:07] 2026-01-30 03:16:00,040 | INFO     | executing command: cat /etc/os-release
[2026-01-29 22:17:07] 2026-01-30 03:16:00,252 | INFO     | cat /etc/os-release:
[2026-01-29 22:17:07] NAME="CentOS Linux"
[2026-01-29 22:17:07] VERSION="7 (Core)"
[2026-01-29 22:17:07] ID="centos"
[2026-01-29 22:17:07] ID_LIKE="rhel fedora"
[2026-01-29 22:17:07] VERSION_ID="7"
[2026-01-29 22:17:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 22:17:07] ANSI_COLOR="0;31"
[2026-01-29 22:17:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 22:17:07] HOME_URL="https://www.centos.org/"
[2026-01-29 22:17:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 22:17:07] 
[2026-01-29 22:17:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 22:17:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 22:17:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 22:17:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 22:17:07] 
[2026-01-29 22:17:07] 2026-01-30 03:16:00,252 | INFO     | **************************************
[2026-01-29 22:17:07] 2026-01-30 03:16:00,756 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-29 22:17:07] 2026-01-30 03:16:00,885 | INFO     | sufficient remaining disk space (70615302144 B)
[2026-01-29 22:17:07] 2026-01-30 03:16:00,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 22:17:07] 2026-01-30 03:16:00,885 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 22:17:07] 2026-01-30 03:16:00,886 | INFO     | update_server=False
[2026-01-29 22:17:07] 2026-01-30 03:16:00,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 22:17:07] 2026-01-30 03:16:00,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 22:17:07] 2026-01-30 03:16:00,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 22:17:07] 2026-01-30 03:16:00,952 | INFO     | aborting loop
[2026-01-29 22:17:07] 2026-01-30 03:16:01,518 | INFO     | all data control threads have been joined
[2026-01-29 22:17:07] 2026-01-30 03:16:01,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 22:17:07] 2026-01-30 03:16:01,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 22:17:07] 2026-01-30 03:16:01,892 | INFO     | [job] retrieve thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:01,958 | INFO     | [job] job monitor thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:02,102 | INFO     | all job control threads have been joined
[2026-01-29 22:17:07] 2026-01-30 03:16:02,140 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:02,194 | INFO     | all payload control threads have been joined
[2026-01-29 22:17:07] 2026-01-30 03:16:02,208 | INFO     | [payload] validate_post thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:02,248 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:02,297 | INFO     | [job] validate thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:02,305 | INFO     | [data] copytool_in thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:02,531 | INFO     | [data] control thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:02,611 | INFO     | [job] queue monitor thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:02,642 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:02,897 | INFO     | [data] copytool_out thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:03,012 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:03,146 | INFO     | [job] control thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:03,200 | INFO     | [payload] control thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:03,339 | INFO     | [payload] failed_post thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:05,889 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 22:17:07] 2026-01-30 03:16:29,039 | INFO     | PID=240262 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-29 22:17:07] 2026-01-30 03:16:29,039 | INFO     | .. there are 29 such processes running
[2026-01-29 22:17:07] 2026-01-30 03:16:29,040 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 22:17:07] 2026-01-30 03:16:29,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 22:17:07] 2026-01-30 03:16:29,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 22:17:07] 2026-01-30 03:16:37,433 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-01-29 22:17:07] 2026-01-30 03:17:00,389 | INFO     | [monitor] cgroup control has ended
[2026-01-29 22:17:07] 2026-01-30 03:17:01,396 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140373506312000)>', '<ExcThread(monitor, started 140372852324096)>']
[2026-01-29 22:17:07] 2026-01-30 03:17:02,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 22:17:07] 2026-01-30 03:17:02,263 | INFO     | [monitor] control thread has ended
[2026-01-29 22:17:07] 2026-01-30 03:17:06,428 | INFO     | all workflow threads have been joined
[2026-01-29 22:17:07] 2026-01-30 03:17:06,429 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 22:17:07] 2026-01-30 03:17:06,429 | INFO     | traces error code: 0
[2026-01-29 22:17:07] 2026-01-30 03:17:06,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 22:17:07] 2026-01-30 03:17:07,278 [wrapper] ==== pilot stdout END ====
[2026-01-29 22:17:07] 2026-01-30 03:17:07,292 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 22:17:07] 2026-01-30 03:17:07,307 [wrapper] pilotpid: 240262
[2026-01-29 22:17:07] 2026-01-30 03:17:07,331 [wrapper] Pilot exit status: 0
[2026-01-29 22:17:07] 2026-01-30 03:17:07,349 [wrapper] pandaids: 6979592419
[2026-01-29 22:17:07] 2026-01-30 03:17:07,505 [wrapper] cleanup supervisor_pilot  789424 240263
[2026-01-29 22:17:07] 2026-01-30 03:17:07,523 [wrapper] Test setup, not cleaning
[2026-01-29 22:17:07] 2026-01-30 03:17:07,531 [wrapper] apfmon messages muted
[2026-01-29 22:17:07] 2026-01-30 03:17:07,546 [wrapper] ==== wrapper stdout END ====
[2026-01-29 22:17:07] 2026-01-30 03:17:07,549 [wrapper] ==== wrapper stderr END ====
[2026-01-29 22:17:07]  *** Error codes and diagnostics ***
[2026-01-29 22:17:07]     "exeErrorCode": 0,
[2026-01-29 22:17:07]     "exeErrorDiag": "",
[2026-01-29 22:17:07]     "pilotErrorCode": 0,
[2026-01-29 22:17:07]     "pilotErrorDiag": "",
[2026-01-29 22:17:07]  *** Listing of results directory ***
[2026-01-29 22:17:07] total 548092
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas    584422 Jan 22 05:24 pilot3.tar.gz
[2026-01-29 22:17:07] -rwx------. 1 boincer umatlas     36322 Jan 22 05:27 runpilot2-wrapper.sh
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas      5111 Jan 22 05:31 queuedata.json
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas       100 Jan 29 19:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 22:17:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 29 19:46 run_atlas
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas       105 Jan 29 19:46 job.xml
[2026-01-29 22:17:07] -rw-r--r--. 2 boincer umatlas 306570099 Jan 29 19:46 EVNT.48312944._000011.pool.root.1
[2026-01-29 22:17:07] -rw-r--r--. 2 boincer umatlas     15845 Jan 29 19:46 start_atlas.sh
[2026-01-29 22:17:07] drwxrwx--x. 2 boincer umatlas      4096 Jan 29 19:46 shared
[2026-01-29 22:17:07] -rw-r--r--. 2 boincer umatlas    597776 Jan 29 19:46 input.tar.gz
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas         0 Jan 29 19:46 boinc_lockfile
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas      2617 Jan 29 19:46 pandaJob.out
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas        57 Jan 29 19:46 setup.sh.local
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas   1009660 Jan 29 19:46 agis_schedconf.cvmfs.json
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas   1511668 Jan 29 19:46 agis_ddmendpoints.agis.ALL.json
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas       428 Jan 29 19:46 workernode_map.json
[2026-01-29 22:17:07] drwx------. 5 boincer umatlas      4096 Jan 29 19:46 pilot3
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas 247530774 Jan 29 22:12 HITS.48312946._000275.pool.root.1
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas       529 Jan 29 22:12 boinc_task_state.xml
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas      6944 Jan 29 22:13 init_data.xml
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas      1042 Jan 29 22:15 memory_monitor_summary.json
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas    425481 Jan 29 22:15 log.48312946._000275.job.log.tgz.1
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas      6334 Jan 29 22:15 heartbeat.json
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas        95 Jan 29 22:16 pilot_heartbeat.json
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas        27 Jan 29 22:17 wrapper_checkpoint.txt
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas      8192 Jan 29 22:17 boinc_mmap_file
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas      4819 Jan 29 22:17 pilotlog.txt
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas   1172959 Jan 29 22:17 log.48312946._000275.job.log.1
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas       357 Jan 29 22:17 output.list
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas       620 Jan 29 22:17 runtime_log
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas   1617920 Jan 29 22:17 result.tar.gz
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas       655 Jan 29 22:17 XT8MDm05628n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCktKDm3rzhZm.diag
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas      9336 Jan 29 22:17 runtime_log.err
[2026-01-29 22:17:07] -rw-r--r--. 1 boincer umatlas     21147 Jan 29 22:17 stderr.txt
[2026-01-29 22:17:07] HITS file was successfully produced:
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas 247530774 Jan 29 22:12 shared/HITS.pool.root.1
[2026-01-29 22:17:07]  *** Contents of shared directory: ***
[2026-01-29 22:17:07] total 543308
[2026-01-29 22:17:07] -rw-r--r--. 2 boincer umatlas 306570099 Jan 29 19:46 ATLAS.root_0
[2026-01-29 22:17:07] -rw-r--r--. 2 boincer umatlas     15845 Jan 29 19:46 start_atlas.sh
[2026-01-29 22:17:07] -rw-r--r--. 2 boincer umatlas    597776 Jan 29 19:46 input.tar.gz
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas 247530774 Jan 29 22:12 HITS.pool.root.1
[2026-01-29 22:17:07] -rw-------. 1 boincer umatlas   1617920 Jan 29 22:17 result.tar.gz
22:17:09 (236122): run_atlas exited; CPU time 38445.797995
22:17:09 (236122): called boinc_finish(0)

</stderr_txt>
]]>

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