Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:24:23 (10322): wrapper (7.7.26015): starting
18:24:23 (10322): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 18:24:23] Arguments: --nthreads 8
[2026-01-29 18:24:23] Threads: 8
[2026-01-29 18:24:23] Checking for CVMFS
[2026-01-29 18:24:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 18:24:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 18:24:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 18:24:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 18:24:23] 2.11.2.0 2933 39247 87260 155659 0 49 10589477 20275200 1 130560 0 11112957 99.708 4009748 31733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-29 18:24:23] CVMFS is ok
[2026-01-29 18:24:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 18:24:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 18:24:23] Further information can be found at the LHC@home message board.
[2026-01-29 18:24:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 18:24:23] Checking for apptainer binary...
[2026-01-29 18:24:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 18:24:23] Running /usr/bin/apptainer --version
[2026-01-29 18:24:23] apptainer version 1.3.2-1.el7
[2026-01-29 18:24:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 18:24:25] c-115-2.aglt2.org
[2026-01-29 18:24:25] apptainer works
[2026-01-29 18:24:25] Set ATHENA_PROC_NUMBER=8
[2026-01-29 18:24:25] Set ATHENA_CORE_NUMBER=8
[2026-01-29 18:24:25] Starting ATLAS job with PandaID=6992221900
[2026-01-29 18:24:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 20:05:19]  *** The last 200 lines of the pilot log: ***
[2026-01-29 20:05:19]  is_altstaged=None
[2026-01-29 20:05:19]  is_tar=False
[2026-01-29 20:05:19]  lfn=log.48310589._002727.job.log.tgz.1
[2026-01-29 20:05:19]  mtime=0
[2026-01-29 20:05:19]  protocol_id=None
[2026-01-29 20:05:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-29 20:05:19]  replicas=None
[2026-01-29 20:05:19]  scope=mc23_13p6TeV
[2026-01-29 20:05:19]  status=None
[2026-01-29 20:05:19]  status_code=0
[2026-01-29 20:05:19]  storage_token=
[2026-01-29 20:05:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6992221900/log.48310589._002727.job.log.tgz.1
[2026-01-29 20:05:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/39/log.48310589._002727.job.log.tgz.1
[2026-01-29 20:05:19]  workdir=None
[2026-01-29 20:05:19] ]
[2026-01-29 20:05:19] 2026-01-30 01:04:41,253 | INFO     | transferring file log.48310589._002727.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6992221900/log.48310589._002727.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-29 20:05:19] 2026-01-30 01:04:41,253 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6992221900/log.48310589._002727.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310589._002727.job
[2026-01-29 20:05:19] 2026-01-30 01:04:41,283 | INFO     | adding to output.list: log.48310589._002727.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/39/log.48310589._002727.job.log.tg
[2026-01-29 20:05:19] 2026-01-30 01:04:41,285 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-29 20:05:19] 2026-01-30 01:04:41,285 | INFO     | summary of transferred files:
[2026-01-29 20:05:19] 2026-01-30 01:04:41,285 | INFO     |  -- lfn=log.48310589._002727.job.log.tgz.1, status_code=0, status=transferred
[2026-01-29 20:05:19] 2026-01-30 01:04:41,286 | INFO     | stage-out finished correctly
[2026-01-29 20:05:19] 2026-01-30 01:04:41,951 | INFO     | time since job start (5993s) is within the limit (349056.0s)
[2026-01-29 20:05:19] 2026-01-30 01:04:43,652 | INFO     | monitor loop #456: job 0:6992221900 is in state 'finished'
[2026-01-29 20:05:19] 2026-01-30 01:04:43,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-29 20:05:19] 2026-01-30 01:04:43,957 | INFO     | time since job start (5995s) is within the limit (349056.0s)
[2026-01-29 20:05:19] 2026-01-30 01:04:44,380 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-29 20:05:19] 2026-01-30 01:04:45,061 | INFO     | PID=13999 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 20:05:19] 2026-01-30 01:04:46,062 | INFO     | time since job start (5998s) is within the limit (349056.0s)
[2026-01-29 20:05:19] 2026-01-30 01:04:46,155 | INFO     | monitor loop #457: job 0:6992221900 is in state 'finished'
[2026-01-29 20:05:19] 2026-01-30 01:04:46,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-29 20:05:19] 2026-01-30 01:04:47,382 | INFO     | job 6992221900 has state=finished
[2026-01-29 20:05:19] 2026-01-30 01:04:47,382 | INFO     | preparing for final server update for job 6992221900 in state='finished'
[2026-01-29 20:05:19] 2026-01-30 01:04:47,446 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-29 20:05:19] 2026-01-30 01:04:47,447 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6992221900/jobReport.json
[2026-01-29 20:05:19] 2026-01-30 01:04:47,450 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-29 20:05:19] 2026-01-30 01:04:47,450 | INFO     | this job has now completed (state=finished)
[2026-01-29 20:05:19] 2026-01-30 01:04:47,450 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-29 20:05:19] 2026-01-30 01:04:47,450 | INFO     | log transfer has been attempted: DONE
[2026-01-29 20:05:19] 2026-01-30 01:04:47,450 | INFO     | job 6992221900 has finished - writing final server update
[2026-01-29 20:05:19] 2026-01-30 01:04:47,451 | INFO     | total number of processed events: 400 (read)
[2026-01-29 20:05:19] 2026-01-30 01:04:47,452 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6992221900/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 20:05:19] 2026-01-30 01:04:47,453 | INFO     | extracted standard info from prmon json
[2026-01-29 20:05:19] 2026-01-30 01:04:47,453 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 20:05:19] 2026-01-30 01:04:47,453 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 20:05:19] 2026-01-30 01:04:47,453 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 20:05:19] 2026-01-30 01:04:47,453 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 20:05:19] 2026-01-30 01:04:47,455 | INFO     | fitting pss+swap vs Time
[2026-01-29 20:05:19] 2026-01-30 01:04:47,455 | INFO     | sum of square deviations: 233641590.0
[2026-01-29 20:05:19] 2026-01-30 01:04:47,456 | INFO     | sum of deviations: -16841267655.000006
[2026-01-29 20:05:19] 2026-01-30 01:04:47,456 | INFO     | mean x: 1769732163.0
[2026-01-29 20:05:19] 2026-01-30 01:04:47,456 | INFO     | mean y: 2667579.6483516484
[2026-01-29 20:05:19] 2026-01-30 01:04:47,456 | INFO     | intersect: 127567854217.63133
[2026-01-29 20:05:19] 2026-01-30 01:04:47,456 | INFO     | chi2: 0.08552891170117284
[2026-01-29 20:05:19] 2026-01-30 01:04:47,456 | INFO     | current memory leak: -72.08 B/s (using 91 data points, chi2=0.09)
[2026-01-29 20:05:19] 2026-01-30 01:04:47,457 | INFO     | could have reported an average CPU frequency of 1762 MHz (7 samples)
[2026-01-29 20:05:19] 2026-01-30 01:04:47,457 | INFO     | ..............................
[2026-01-29 20:05:19] 2026-01-30 01:04:47,457 | INFO     | . Timing measurements:
[2026-01-29 20:05:19] 2026-01-30 01:04:47,457 | INFO     | . get job = 0 s
[2026-01-29 20:05:19] 2026-01-30 01:04:47,457 | INFO     | . initial setup = 8 s
[2026-01-29 20:05:19] 2026-01-30 01:04:47,457 | INFO     | . payload setup = 7 s
[2026-01-29 20:05:19] 2026-01-30 01:04:47,457 | INFO     | . stage-in = 0 s
[2026-01-29 20:05:19] 2026-01-30 01:04:47,457 | INFO     | . payload execution = 5968 s
[2026-01-29 20:05:19] 2026-01-30 01:04:47,458 | INFO     | . stage-out = 0 s
[2026-01-29 20:05:19] 2026-01-30 01:04:47,458 | INFO     | . log creation = 0 s
[2026-01-29 20:05:19] 2026-01-30 01:04:47,458 | INFO     | ..............................
[2026-01-29 20:05:19] 2026-01-30 01:04:47,533 | INFO     | 
[2026-01-29 20:05:19] 2026-01-30 01:04:47,534 | INFO     | job summary report
[2026-01-29 20:05:19] 2026-01-30 01:04:47,534 | INFO     | --------------------------------------------------
[2026-01-29 20:05:19] 2026-01-30 01:04:47,534 | INFO     | PanDA job id: 6992221900
[2026-01-29 20:05:19] 2026-01-30 01:04:47,534 | INFO     | task id: 48310589
[2026-01-29 20:05:19] 2026-01-30 01:04:47,535 | INFO     | errors: (none)
[2026-01-29 20:05:19] 2026-01-30 01:04:47,535 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 20:05:19] 2026-01-30 01:04:47,535 | INFO     | pilot state: finished 
[2026-01-29 20:05:19] 2026-01-30 01:04:47,535 | INFO     | transexitcode: 0
[2026-01-29 20:05:19] 2026-01-30 01:04:47,535 | INFO     | exeerrorcode: 0
[2026-01-29 20:05:19] 2026-01-30 01:04:47,535 | INFO     | exeerrordiag: 
[2026-01-29 20:05:19] 2026-01-30 01:04:47,536 | INFO     | exitcode: 0
[2026-01-29 20:05:19] 2026-01-30 01:04:47,536 | INFO     | exitmsg: OK
[2026-01-29 20:05:19] 2026-01-30 01:04:47,536 | INFO     | cpuconsumptiontime: 43751 s
[2026-01-29 20:05:19] 2026-01-30 01:04:47,536 | INFO     | nevents: 400
[2026-01-29 20:05:19] 2026-01-30 01:04:47,536 | INFO     | neventsw: 0
[2026-01-29 20:05:19] 2026-01-30 01:04:47,536 | INFO     | pid: 18615
[2026-01-29 20:05:19] 2026-01-30 01:04:47,537 | INFO     | pgrp: 18615
[2026-01-29 20:05:19] 2026-01-30 01:04:47,537 | INFO     | corecount: 8
[2026-01-29 20:05:19] 2026-01-30 01:04:47,537 | INFO     | event service: False
[2026-01-29 20:05:19] 2026-01-30 01:04:47,537 | INFO     | sizes: {0: 2278279, 11: 2278279, 5979: 2305005, 5982: 2314003, 5985: 2314059, 5988: 2314253}
[2026-01-29 20:05:19] 2026-01-30 01:04:47,537 | INFO     | --------------------------------------------------
[2026-01-29 20:05:19] 2026-01-30 01:04:47,537 | INFO     | 
[2026-01-29 20:05:19] 2026-01-30 01:04:47,538 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-29 20:05:19] 2026-01-30 01:04:47,567 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,567 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,567 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,568 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,568 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,568 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,568 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,568 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,568 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,569 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,569 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,569 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,569 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,569 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,569 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,569 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,570 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,570 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 20:05:19] 2026-01-30 01:04:47,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,570 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 20:05:19] 2026-01-30 01:04:47,570 | INFO     | job 6992221900 has completed (purged errors)
[2026-01-29 20:05:19] 2026-01-30 01:04:47,571 | INFO     | overall cleanup function is called
[2026-01-29 20:05:19] 2026-01-30 01:04:48,579 | INFO     | --- collectZombieJob: --- 10, [18615]
[2026-01-29 20:05:19] 2026-01-30 01:04:48,579 | INFO     | zombie collector waiting for pid 18615
[2026-01-29 20:05:19] 2026-01-30 01:04:48,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 20:05:19] 2026-01-30 01:04:48,580 | INFO     | collected zombie processes
[2026-01-29 20:05:19] 2026-01-30 01:04:48,580 | INFO     | will attempt to kill all subprocesses of pid=18615
[2026-01-29 20:05:19] 2026-01-30 01:04:48,666 | INFO     | process IDs to be killed: [18615] (in reverse order)
[2026-01-29 20:05:19] 2026-01-30 01:04:48,723 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 20:05:19] 2026-01-30 01:04:48,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 20:05:19] 2026-01-30 01:04:48,728 | INFO     | did not find any defunct processes belonging to 18615
[2026-01-29 20:05:19] 2026-01-30 01:04:48,731 | INFO     | did not find any defunct processes belonging to 18615
[2026-01-29 20:05:19] 2026-01-30 01:04:48,731 | INFO     | ready for new job
[2026-01-29 20:05:19] 2026-01-30 01:04:48,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 20:05:19] 2026-01-30 01:04:48,733 | INFO     | **************************************
[2026-01-29 20:05:19] 2026-01-30 01:04:48,733 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 20:05:19] 2026-01-30 01:04:48,734 | INFO     | **************************************
[2026-01-29 20:05:19] 2026-01-30 01:04:48,734 | INFO     | 
[2026-01-29 20:05:19] 2026-01-30 01:04:48,734 | INFO     | architecture information:
[2026-01-29 20:05:19] 2026-01-30 01:04:48,735 | INFO     | executing command: cat /etc/os-release
[2026-01-29 20:05:19] 2026-01-30 01:04:48,754 | INFO     | cat /etc/os-release:
[2026-01-29 20:05:19] NAME="CentOS Linux"
[2026-01-29 20:05:19] VERSION="7 (Core)"
[2026-01-29 20:05:19] ID="centos"
[2026-01-29 20:05:19] ID_LIKE="rhel fedora"
[2026-01-29 20:05:19] VERSION_ID="7"
[2026-01-29 20:05:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 20:05:19] ANSI_COLOR="0;31"
[2026-01-29 20:05:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 20:05:19] HOME_URL="https://www.centos.org/"
[2026-01-29 20:05:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 20:05:19] 
[2026-01-29 20:05:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 20:05:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 20:05:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 20:05:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 20:05:19] 
[2026-01-29 20:05:19] 2026-01-30 01:04:48,755 | INFO     | **************************************
[2026-01-29 20:05:19] 2026-01-30 01:04:49,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-29 20:05:19] 2026-01-30 01:04:49,278 | INFO     | sufficient remaining disk space (18034458624 B)
[2026-01-29 20:05:19] 2026-01-30 01:04:49,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 20:05:19] 2026-01-30 01:04:49,279 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 20:05:19] 2026-01-30 01:04:49,279 | INFO     | update_server=False
[2026-01-29 20:05:19] 2026-01-30 01:04:49,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 20:05:19] 2026-01-30 01:04:49,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 20:05:19] 2026-01-30 01:04:49,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 20:05:19] 2026-01-30 01:04:49,664 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 20:05:19] 2026-01-30 01:04:49,664 | INFO     | aborting loop
[2026-01-29 20:05:19] 2026-01-30 01:04:49,735 | INFO     | all data control threads have been joined
[2026-01-29 20:05:19] 2026-01-30 01:04:50,124 | INFO     | all job control threads have been joined
[2026-01-29 20:05:19] 2026-01-30 01:04:50,283 | INFO     | [job] retrieve thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:50,285 | INFO     | [job] queue monitor thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:50,398 | INFO     | all payload control threads have been joined
[2026-01-29 20:05:19] 2026-01-30 01:04:50,432 | INFO     | [payload] failed_post thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:50,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 20:05:19] 2026-01-30 01:04:50,520 | INFO     | [job] validate thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:50,670 | INFO     | [job] job monitor thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:50,701 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:50,741 | INFO     | [data] control thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:51,130 | INFO     | [job] control thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:51,157 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:51,163 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:51,232 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:51,381 | INFO     | [data] copytool_out thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:51,389 | INFO     | [data] copytool_in thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:51,403 | INFO     | [payload] control thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:51,489 | INFO     | [payload] validate_post thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:54,471 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 20:05:19] 2026-01-30 01:04:57,378 | INFO     | [monitor] cgroup control has ended
[2026-01-29 20:05:19] 2026-01-30 01:04:58,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139800913028928)>', '<ExcThread(monitor, started 139800094955264)>']
[2026-01-29 20:05:19] 2026-01-30 01:05:03,794 | INFO     | all workflow threads have been joined
[2026-01-29 20:05:19] 2026-01-30 01:05:03,795 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 20:05:19] 2026-01-30 01:05:03,795 | INFO     | traces error code: 0
[2026-01-29 20:05:19] 2026-01-30 01:05:03,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 20:05:19] 2026-01-30 01:05:19,278 | INFO     | PID=13999 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 20:05:19] 2026-01-30 01:05:19,279 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 20:05:19] 2026-01-30 01:05:19,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 20:05:19] 2026-01-30 01:05:19,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 20:05:19] 2026-01-30 01:05:19,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 20:05:19] 2026-01-30 01:05:19,279 | INFO     | [monitor] control thread has ended
[2026-01-29 20:05:19] 2026-01-30 01:05:19,402 [wrapper] ==== pilot stdout END ====
[2026-01-29 20:05:19] 2026-01-30 01:05:19,406 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 20:05:19] 2026-01-30 01:05:19,411 [wrapper] pilotpid: 13999
[2026-01-29 20:05:19] 2026-01-30 01:05:19,415 [wrapper] Pilot exit status: 0
[2026-01-29 20:05:19] 2026-01-30 01:05:19,434 [wrapper] pandaids: 6992221900
[2026-01-29 20:05:19] 2026-01-30 01:05:19,477 [wrapper] cleanup supervisor_pilot 26276 14000
[2026-01-29 20:05:19] 2026-01-30 01:05:19,482 [wrapper] Test setup, not cleaning
[2026-01-29 20:05:19] 2026-01-30 01:05:19,487 [wrapper] apfmon messages muted
[2026-01-29 20:05:19] 2026-01-30 01:05:19,492 [wrapper] ==== wrapper stdout END ====
[2026-01-29 20:05:19] 2026-01-30 01:05:19,496 [wrapper] ==== wrapper stderr END ====
[2026-01-29 20:05:19]  *** Error codes and diagnostics ***
[2026-01-29 20:05:19]     "exeErrorCode": 0,
[2026-01-29 20:05:19]     "exeErrorDiag": "",
[2026-01-29 20:05:19]     "pilotErrorCode": 0,
[2026-01-29 20:05:19]     "pilotErrorDiag": "",
[2026-01-29 20:05:19]  *** Listing of results directory ***
[2026-01-29 20:05:19] total 664164
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas    584422 Jan 29 14:28 pilot3.tar.gz
[2026-01-29 20:05:19] -rwx------ 1 boincer umatlas     36322 Jan 29 14:37 runpilot2-wrapper.sh
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas      5111 Jan 29 14:38 queuedata.json
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas       100 Jan 29 18:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 20:05:19] -rwxr-xr-x 1 boincer umatlas      7986 Jan 29 18:24 run_atlas
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas       105 Jan 29 18:24 job.xml
[2026-01-29 20:05:19] -rw-r--r-- 2 boincer umatlas 493046169 Jan 29 18:24 EVNT.48310585._000054.pool.root.1
[2026-01-29 20:05:19] -rw-r--r-- 2 boincer umatlas     15845 Jan 29 18:24 start_atlas.sh
[2026-01-29 20:05:19] drwxrwx--x 2 boincer umatlas      4096 Jan 29 18:24 shared
[2026-01-29 20:05:19] -rw-r--r-- 2 boincer umatlas    597764 Jan 29 18:24 input.tar.gz
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas         0 Jan 29 18:24 boinc_lockfile
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas      2529 Jan 29 18:24 pandaJob.out
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas        57 Jan 29 18:24 setup.sh.local
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas   1009660 Jan 29 18:24 agis_schedconf.cvmfs.json
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas   1511668 Jan 29 18:24 agis_ddmendpoints.agis.ALL.json
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas       432 Jan 29 18:24 workernode_map.json
[2026-01-29 20:05:19] drwx------ 5 boincer umatlas      4096 Jan 29 18:24 pilot3
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas      5909 Jan 29 20:00 init_data.xml
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas 180633217 Jan 29 20:04 HITS.48310589._002727.pool.root.1
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas       530 Jan 29 20:04 boinc_task_state.xml
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas      1047 Jan 29 20:04 memory_monitor_summary.json
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas    384701 Jan 29 20:04 log.48310589._002727.job.log.tgz.1
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas      6403 Jan 29 20:04 heartbeat.json
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas      8192 Jan 29 20:04 boinc_mmap_file
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas        27 Jan 29 20:04 wrapper_checkpoint.txt
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas        95 Jan 29 20:05 pilot_heartbeat.json
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas       745 Jan 29 20:05 pilotlog.txt
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas    857344 Jan 29 20:05 log.48310589._002727.job.log.1
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas       357 Jan 29 20:05 output.list
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas       620 Jan 29 20:05 runtime_log
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas   1259520 Jan 29 20:05 result.tar.gz
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas      9336 Jan 29 20:05 runtime_log.err
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas       657 Jan 29 20:05 3SFNDmZ0m58n9Rq4apOajLDm4fhM0noT9bVooX4SDmkFJKDmkyCTSn.diag
[2026-01-29 20:05:19] -rw-r--r-- 1 boincer umatlas     21590 Jan 29 20:05 stderr.txt
[2026-01-29 20:05:19] HITS file was successfully produced:
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas 180633217 Jan 29 20:04 shared/HITS.pool.root.1
[2026-01-29 20:05:19]  *** Contents of shared directory: ***
[2026-01-29 20:05:19] total 659732
[2026-01-29 20:05:19] -rw-r--r-- 2 boincer umatlas 493046169 Jan 29 18:24 ATLAS.root_0
[2026-01-29 20:05:19] -rw-r--r-- 2 boincer umatlas     15845 Jan 29 18:24 start_atlas.sh
[2026-01-29 20:05:19] -rw-r--r-- 2 boincer umatlas    597764 Jan 29 18:24 input.tar.gz
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas 180633217 Jan 29 20:04 HITS.pool.root.1
[2026-01-29 20:05:19] -rw------- 1 boincer umatlas   1259520 Jan 29 20:05 result.tar.gz
20:05:21 (10322): run_atlas exited; CPU time 43755.653251
20:05:21 (10322): called boinc_finish(0)

</stderr_txt>
]]>

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