Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:03 (544104): wrapper (7.7.26015): starting
09:35:03 (544104): wrapper: running run_atlas (--nthreads 4)
[2026-01-30 09:35:03] Arguments: --nthreads 4
[2026-01-30 09:35:03] Threads: 4
[2026-01-30 09:35:03] Checking for CVMFS
[2026-01-30 09:35:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-30 09:35:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-30 09:35:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-30 09:35:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-30 09:35:03] 2.9.2.0 53194 2576 95416 155671 3 50 23313153 36864001 0 130560 0 1389969 99.990 66538 12215 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-30 09:35:03] CVMFS is ok
[2026-01-30 09:35:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-30 09:35:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-30 09:35:03] Further information can be found at the LHC@home message board.
[2026-01-30 09:35:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-30 09:35:03] Checking for apptainer binary...
[2026-01-30 09:35:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-30 09:35:03] Running /usr/bin/apptainer --version
[2026-01-30 09:35:03] apptainer version 1.4.1-1.1
[2026-01-30 09:35:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-30 09:35:03] thA334
[2026-01-30 09:35:03] apptainer works
[2026-01-30 09:35:03] Set ATHENA_PROC_NUMBER=4
[2026-01-30 09:35:03] Set ATHENA_CORE_NUMBER=4
[2026-01-30 09:35:03] Starting ATLAS job with PandaID=6986150800
[2026-01-30 09:35:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-30 10:47:25]  *** The last 200 lines of the pilot log: ***
[2026-01-30 10:47:25] 2026-01-30 09:46:47,758 | INFO     | [job] control thread has finished
[2026-01-30 10:47:25] 2026-01-30 09:46:48,035 | INFO     | [payload] control thread has finished
[2026-01-30 10:47:25] 2026-01-30 09:46:48,045 | INFO     | [job] validate thread has finished
[2026-01-30 10:47:25] 2026-01-30 09:46:48,055 | INFO     | [payload] validate_post thread has finished
[2026-01-30 10:47:25] 2026-01-30 09:46:48,055 | WARNING  | process 552730 can no longer be monitored (due to stat problems) - aborting
[2026-01-30 10:47:25] 2026-01-30 09:46:48,085 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-30 10:47:25] 2026-01-30 09:46:48,085 | INFO     | [job] create_data_payload thread has finished
[2026-01-30 10:47:25] 2026-01-30 09:46:48,123 | INFO     | number of running child processes to parent process 552730: 1
[2026-01-30 10:47:25] 2026-01-30 09:46:48,123 | INFO     | maximum number of monitored processes: 6
[2026-01-30 10:47:25] 2026-01-30 09:46:48,123 | INFO     | aborting job monitoring since job object (job id=6986150800) has expired
[2026-01-30 10:47:25] 2026-01-30 09:46:48,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-30 10:47:25] 2026-01-30 09:46:48,123 | INFO     | will abort loop
[2026-01-30 10:47:25] 2026-01-30 09:46:48,185 | INFO     | [payload] validate_pre thread has finished
[2026-01-30 10:47:25] 2026-01-30 09:46:48,366 | INFO     | [data] copytool_in thread has finished
[2026-01-30 10:47:25] 2026-01-30 09:46:49,128 | INFO     | [job] job monitor thread has finished
[2026-01-30 10:47:25] 2026-01-30 09:46:49,214 | INFO     | [data] copytool_out thread has finished
[2026-01-30 10:47:25] 2026-01-30 09:46:49,406 | INFO     | job.realtimelogging is not enabled
[2026-01-30 10:47:25] 2026-01-30 09:46:49,916 | INFO     | [data] queue_monitor thread has finished
[2026-01-30 10:47:25] 2026-01-30 09:46:50,412 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-30 10:47:25] 2026-01-30 09:47:17,033 | INFO     | PID=548217 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-30 10:47:25] 2026-01-30 09:47:17,033 | INFO     | found 0 job(s) in 20 queues
[2026-01-30 10:47:25] 2026-01-30 09:47:17,033 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-30 10:47:25] 2026-01-30 09:47:17,033 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-30 10:47:25] 2026-01-30 09:47:20,214 | INFO     | [monitor] cgroup control has ended
[2026-01-30 10:47:25] 2026-01-30 09:47:20,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762790094656)>', '<ExcThread(monitor, started 139761842902784)>']
[2026-01-30 10:47:25] 2026-01-30 09:47:21,055 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-30 10:47:25] 2026-01-30 09:47:21,055 | INFO     | [monitor] control thread has ended
[2026-01-30 10:47:25] 2026-01-30 09:47:25,463 | INFO     | all workflow threads have been joined
[2026-01-30 10:47:25] 2026-01-30 09:47:25,464 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-30 10:47:25] 2026-01-30 09:47:25,464 | INFO     | traces error code: 0
[2026-01-30 10:47:25] 2026-01-30 09:47:25,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-30 10:47:25] 2026-01-30 09:47:25,532 [wrapper] ==== pilot stdout END ====
[2026-01-30 10:47:25] 2026-01-30 09:47:25,536 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-30 10:47:25] 2026-01-30 09:47:25,540 [wrapper] pilotpid: 548217
[2026-01-30 10:47:25] 2026-01-30 09:47:25,544 [wrapper] Pilot exit status: 0
[2026-01-30 10:47:25] 2026-01-30 09:47:25,555 [wrapper] pandaids: 6986150800
[2026-01-30 10:47:25] 2026-01-30 09:47:25,575 [wrapper] cleanup supervisor_pilot  557829 548218
[2026-01-30 10:47:25] 2026-01-30 09:47:25,579 [wrapper] Test setup, not cleaning
[2026-01-30 10:47:25] 2026-01-30 09:47:25,582 [wrapper] apfmon messages muted
[2026-01-30 10:47:25] 2026-01-30 09:47:25,586 [wrapper] ==== wrapper stdout END ====
[2026-01-30 10:47:25] 2026-01-30 09:47:25,589 [wrapper] ==== wrapper stderr END ====
[2026-01-30 10:47:25]  *** Error codes and diagnostics ***
[2026-01-30 10:47:25]     "exeErrorCode": 0,
[2026-01-30 10:47:25]     "exeErrorDiag": "",
[2026-01-30 10:47:25]     "pilotErrorCode": 0,
[2026-01-30 10:47:25]     "pilotErrorDiag": "",
[2026-01-30 10:47:25]  *** Listing of results directory ***
[2026-01-30 10:47:25] total 671908
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc    584422 Jan 28 18:04 pilot3.tar.gz
[2026-01-30 10:47:25] -rwx------ 1 boinc boinc     36322 Jan 28 18:04 runpilot2-wrapper.sh
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc      5111 Jan 28 18:06 queuedata.json
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc       100 Jan 30 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-30 10:47:25] -rwxr-xr-x 1 boinc boinc      7986 Jan 30 09:35 run_atlas
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc       105 Jan 30 09:35 job.xml
[2026-01-30 10:47:25] -rw-r--r-- 2 boinc boinc 495856961 Jan 30 09:35 EVNT.48317929._000049.pool.root.1
[2026-01-30 10:47:25] -rw-r--r-- 2 boinc boinc    597750 Jan 30 09:35 input.tar.gz
[2026-01-30 10:47:25] -rw-r--r-- 2 boinc boinc     15845 Jan 30 09:35 start_atlas.sh
[2026-01-30 10:47:25] drwxrwx--x 2 boinc boinc      4096 Jan 30 09:35 shared
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc         0 Jan 30 09:35 boinc_setup_complete
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc      6369 Jan 30 09:35 init_data.xml
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc         0 Jan 30 09:35 boinc_lockfile
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc      2504 Jan 30 09:35 pandaJob.out
[2026-01-30 10:47:25] -rw------- 1 boinc boinc   1010515 Jan 30 09:35 agis_schedconf.cvmfs.json
[2026-01-30 10:47:25] -rw------- 1 boinc boinc   1511668 Jan 30 09:35 agis_ddmendpoints.agis.ALL.json
[2026-01-30 10:47:25] -rw------- 1 boinc boinc       427 Jan 30 09:35 workernode_map.json
[2026-01-30 10:47:25] drwx------ 5 boinc boinc      4096 Jan 30 09:35 pilot3
[2026-01-30 10:47:25] -rw------- 1 boinc boinc 186487471 Jan 30 10:46 HITS.48317931._005232.pool.root.1
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc       530 Jan 30 10:46 boinc_task_state.xml
[2026-01-30 10:47:25] -rw------- 1 boinc boinc        95 Jan 30 10:46 pilot_heartbeat.json
[2026-01-30 10:47:25] -rw------- 1 boinc boinc      1024 Jan 30 10:46 memory_monitor_summary.json
[2026-01-30 10:47:25] -rw------- 1 boinc boinc    243753 Jan 30 10:46 log.48317931._005232.job.log.tgz.1
[2026-01-30 10:47:25] -rw------- 1 boinc boinc      6313 Jan 30 10:46 heartbeat.json
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc      8192 Jan 30 10:47 boinc_mmap_file
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc        27 Jan 30 10:47 wrapper_checkpoint.txt
[2026-01-30 10:47:25] -rw------- 1 boinc boinc      5341 Jan 30 10:47 pilotlog.txt
[2026-01-30 10:47:25] -rw------- 1 boinc boinc    635232 Jan 30 10:47 log.48317931._005232.job.log.1
[2026-01-30 10:47:25] -rw------- 1 boinc boinc       357 Jan 30 10:47 output.list
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc       620 Jan 30 10:47 runtime_log
[2026-01-30 10:47:25] -rw------- 1 boinc boinc    901120 Jan 30 10:47 result.tar.gz
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc      8896 Jan 30 10:47 runtime_log.err
[2026-01-30 10:47:25] -rw------- 1 boinc boinc       657 Jan 30 10:47 rDuMDmZ9N58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjfGKDmusEexn.diag
[2026-01-30 10:47:25] -rw-r--r-- 1 boinc boinc      6725 Jan 30 10:47 stderr.txt
[2026-01-30 10:47:25] HITS file was successfully produced:
[2026-01-30 10:47:25] -rw------- 1 boinc boinc 186487471 Jan 30 10:46 shared/HITS.pool.root.1
[2026-01-30 10:47:25]  *** Contents of shared directory: ***
[2026-01-30 10:47:25] total 667844
[2026-01-30 10:47:25] -rw-r--r-- 2 boinc boinc 495856961 Jan 30 09:35 ATLAS.root_0
[2026-01-30 10:47:25] -rw-r--r-- 2 boinc boinc    597750 Jan 30 09:35 input.tar.gz
[2026-01-30 10:47:25] -rw-r--r-- 2 boinc boinc     15845 Jan 30 09:35 start_atlas.sh
[2026-01-30 10:47:25] -rw------- 1 boinc boinc 186487471 Jan 30 10:46 HITS.pool.root.1
[2026-01-30 10:47:25] -rw------- 1 boinc boinc    901120 Jan 30 10:47 result.tar.gz
10:47:27 (544104): run_atlas exited; CPU time 16192.988186
10:47:27 (544104): called boinc_finish(0)

</stderr_txt>
]]>

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