Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:03:49 (5613): wrapper (7.7.26015): starting
03:03:49 (5613): wrapper: running run_atlas (--nthreads 8)
[2026-01-30 03:03:49] Arguments: --nthreads 8
[2026-01-30 03:03:49] Threads: 8
[2026-01-30 03:03:49] Checking for CVMFS
[2026-01-30 03:03:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-30 03:03:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-30 03:03:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-30 03:03:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-30 03:03:50] 2.11.0.0 4295 158506 86728 155661 2 188 3340030 4096001 3668 130560 5 16864227 99.671 11311136 570 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-30 03:03:50] CVMFS is ok
[2026-01-30 03:03:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-30 03:03:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-30 03:03:50] Further information can be found at the LHC@home message board.
[2026-01-30 03:03:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-30 03:03:50] Checking for apptainer binary...
[2026-01-30 03:03:50] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-30 03:03:50] apptainer is not installed, using version from CVMFS
[2026-01-30 03:03:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-30 03:03:50] WARNING: Environment variable TMPDIR already has value [/tmp/job_11065295/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node346
[2026-01-30 03:03:50] apptainer works
[2026-01-30 03:03:50] Set ATHENA_PROC_NUMBER=8
[2026-01-30 03:03:50] Set ATHENA_CORE_NUMBER=8
[2026-01-30 03:03:50] Starting ATLAS job with PandaID=6986091012
[2026-01-30 03:03:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11065295/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-30 03:54:07]  *** The last 200 lines of the pilot log: ***
[2026-01-30 03:54:07]  mtime=0
[2026-01-30 03:54:07]  protocol_id=None
[2026-01-30 03:54:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-30 03:54:07]  replicas=None
[2026-01-30 03:54:07]  scope=mc23_13p6TeV
[2026-01-30 03:54:07]  status=None
[2026-01-30 03:54:07]  status_code=0
[2026-01-30 03:54:07]  storage_token=
[2026-01-30 03:54:07]  surl=/tmp/job_11065295/atlas/pilot/slots/0/PanDA_Pilot-6986091012/log.48310620._001106.job.log.tgz.1
[2026-01-30 03:54:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/06/log.48310620._001106.job.log.tgz.1
[2026-01-30 03:54:07]  workdir=None
[2026-01-30 03:54:07] ]
[2026-01-30 03:54:07] 2026-01-30 02:53:07,109 | INFO     | transferring file log.48310620._001106.job.log.tgz.1 from /tmp/job_11065295/atlas/pilot/slots/0/PanDA_Pilot-6986091012/log.48310620._001106.job.log.tgz.1 to /tmp/j
[2026-01-30 03:54:07] 2026-01-30 02:53:07,109 | INFO     | executing command: /usr/bin/env mv /tmp/job_11065295/atlas/pilot/slots/0/PanDA_Pilot-6986091012/log.48310620._001106.job.log.tgz.1 /tmp/job_11065295/atlas/pilot/sl
[2026-01-30 03:54:07] 2026-01-30 02:53:07,117 | INFO     | adding to output.list: log.48310620._001106.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/06/log.48310620._001106.job.log.tg
[2026-01-30 03:54:07] 2026-01-30 02:53:07,118 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-30 03:54:07] 2026-01-30 02:53:07,118 | INFO     | summary of transferred files:
[2026-01-30 03:54:07] 2026-01-30 02:53:07,118 | INFO     |  -- lfn=log.48310620._001106.job.log.tgz.1, status_code=0, status=transferred
[2026-01-30 03:54:07] 2026-01-30 02:53:07,118 | INFO     | stage-out finished correctly
[2026-01-30 03:54:07] 2026-01-30 02:53:07,331 | INFO     | PID=10458 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-30 03:54:07] 2026-01-30 02:53:08,331 | INFO     | time since job start (2951s) is within the limit (349056.0s)
[2026-01-30 03:54:07] 2026-01-30 02:53:09,098 | INFO     | monitor loop #228: job 0:6986091012 is in state 'finished'
[2026-01-30 03:54:07] 2026-01-30 02:53:09,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-30 03:54:07] 2026-01-30 02:53:09,340 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-30 03:54:07] 2026-01-30 02:53:10,336 | INFO     | time since job start (2953s) is within the limit (349056.0s)
[2026-01-30 03:54:07] 2026-01-30 02:53:11,601 | INFO     | monitor loop #229: job 0:6986091012 is in state 'finished'
[2026-01-30 03:54:07] 2026-01-30 02:53:11,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-30 03:54:07] 2026-01-30 02:53:11,742 | INFO     | job 6986091012 has state=finished
[2026-01-30 03:54:07] 2026-01-30 02:53:11,742 | INFO     | preparing for final server update for job 6986091012 in state='finished'
[2026-01-30 03:54:07] 2026-01-30 02:53:12,328 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-30 03:54:07] 2026-01-30 02:53:12,328 | INFO     | reading metadata from: /tmp/job_11065295/atlas/pilot/slots/0/PanDA_Pilot-6986091012/jobReport.json
[2026-01-30 03:54:07] 2026-01-30 02:53:12,329 | INFO     | added worker_node to metadata from /tmp/job_11065295/atlas/pilot/slots/0/workernode_map.json
[2026-01-30 03:54:07] 2026-01-30 02:53:12,329 | INFO     | this job has now completed (state=finished)
[2026-01-30 03:54:07] 2026-01-30 02:53:12,330 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-30 03:54:07] 2026-01-30 02:53:12,330 | INFO     | log transfer has been attempted: DONE
[2026-01-30 03:54:07] 2026-01-30 02:53:12,330 | INFO     | job 6986091012 has finished - writing final server update
[2026-01-30 03:54:07] 2026-01-30 02:53:12,330 | INFO     | total number of processed events: 400 (read)
[2026-01-30 03:54:07] 2026-01-30 02:53:12,341 | INFO     | time since job start (2955s) is within the limit (349056.0s)
[2026-01-30 03:54:07] 2026-01-30 02:53:12,348 | INFO     | using path: /tmp/job_11065295/atlas/pilot/slots/0/PanDA_Pilot-6986091012/memory_monitor_summary.json (trf name=prmon)
[2026-01-30 03:54:07] 2026-01-30 02:53:12,348 | INFO     | extracted standard info from prmon json
[2026-01-30 03:54:07] 2026-01-30 02:53:12,348 | INFO     | extracted standard memory fields from prmon json
[2026-01-30 03:54:07] 2026-01-30 02:53:12,348 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-30 03:54:07] 2026-01-30 02:53:12,348 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-30 03:54:07] 2026-01-30 02:53:12,348 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | fitting pss+swap vs Time
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | sum of square deviations: 22960430.5
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | sum of deviations: 353884515.49999994
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | mean x: 1769740209.5
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | mean y: 2559089.738095238
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | intersect: -27274092216.94258
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | chi2: 0.003209893935437477
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | current memory leak: 15.41 B/s (using 42 data points, chi2=0.00)
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | could have reported an average CPU frequency of 2817 MHz (5 samples)
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | ..............................
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | . Timing measurements:
[2026-01-30 03:54:07] 2026-01-30 02:53:12,349 | INFO     | . get job = 0 s
[2026-01-30 03:54:07] 2026-01-30 02:53:12,350 | INFO     | . initial setup = 2 s
[2026-01-30 03:54:07] 2026-01-30 02:53:12,350 | INFO     | . payload setup = 2 s
[2026-01-30 03:54:07] 2026-01-30 02:53:12,350 | INFO     | . stage-in = 0 s
[2026-01-30 03:54:07] 2026-01-30 02:53:12,350 | INFO     | . payload execution = 2931 s
[2026-01-30 03:54:07] 2026-01-30 02:53:12,350 | INFO     | . stage-out = 0 s
[2026-01-30 03:54:07] 2026-01-30 02:53:12,350 | INFO     | . log creation = 0 s
[2026-01-30 03:54:07] 2026-01-30 02:53:12,350 | INFO     | ..............................
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | 
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | job summary report
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | --------------------------------------------------
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | PanDA job id: 6986091012
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | task id: 48310620
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | errors: (none)
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | pilot state: finished 
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | transexitcode: 0
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | exeerrorcode: 0
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | exeerrordiag: 
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | exitcode: 0
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | exitmsg: OK
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | cpuconsumptiontime: 19487 s
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | nevents: 400
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | neventsw: 0
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | pid: 16595
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | pgrp: 16595
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | corecount: 8
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | event service: False
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | sizes: {0: 2277795, 1: 2278367, 11: 2278367, 2937: 2303913, 2938: 2303912, 2939: 2312996, 2941: 2313180, 2944: 2313406}
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | --------------------------------------------------
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | 
[2026-01-30 03:54:07] 2026-01-30 02:53:12,396 | INFO     | executing command: ls -lF /tmp/job_11065295/atlas/pilot/slots/0
[2026-01-30 03:54:07] 2026-01-30 02:53:12,405 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,405 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,405 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,405 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,405 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | job 6986091012 has completed (purged errors)
[2026-01-30 03:54:07] 2026-01-30 02:53:12,406 | INFO     | overall cleanup function is called
[2026-01-30 03:54:07] 2026-01-30 02:53:13,411 | INFO     | --- collectZombieJob: --- 10, [16595]
[2026-01-30 03:54:07] 2026-01-30 02:53:13,411 | INFO     | zombie collector waiting for pid 16595
[2026-01-30 03:54:07] 2026-01-30 02:53:13,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-30 03:54:07] 2026-01-30 02:53:13,411 | INFO     | collected zombie processes
[2026-01-30 03:54:07] 2026-01-30 02:53:13,411 | INFO     | will attempt to kill all subprocesses of pid=16595
[2026-01-30 03:54:07] 2026-01-30 02:53:13,497 | INFO     | process IDs to be killed: [16595] (in reverse order)
[2026-01-30 03:54:07] 2026-01-30 02:53:13,530 | WARNING  | found no corresponding commands to process id(s)
[2026-01-30 03:54:07] 2026-01-30 02:53:13,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-30 03:54:07] 2026-01-30 02:53:13,535 | INFO     | did not find any defunct processes belonging to 16595
[2026-01-30 03:54:07] 2026-01-30 02:53:13,538 | INFO     | did not find any defunct processes belonging to 16595
[2026-01-30 03:54:07] 2026-01-30 02:53:13,538 | INFO     | ready for new job
[2026-01-30 03:54:07] 2026-01-30 02:53:13,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-30 03:54:07] 2026-01-30 02:53:13,539 | INFO     | **************************************
[2026-01-30 03:54:07] 2026-01-30 02:53:13,539 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-30 03:54:07] 2026-01-30 02:53:13,539 | INFO     | **************************************
[2026-01-30 03:54:07] 2026-01-30 02:53:13,539 | INFO     | 
[2026-01-30 03:54:07] 2026-01-30 02:53:13,552 | INFO     | architecture information:
[2026-01-30 03:54:07] 2026-01-30 02:53:13,553 | INFO     | executing command: cat /etc/os-release
[2026-01-30 03:54:07] 2026-01-30 02:53:13,559 | INFO     | cat /etc/os-release:
[2026-01-30 03:54:07] NAME="CentOS Linux"
[2026-01-30 03:54:07] VERSION="7 (Core)"
[2026-01-30 03:54:07] ID="centos"
[2026-01-30 03:54:07] ID_LIKE="rhel fedora"
[2026-01-30 03:54:07] VERSION_ID="7"
[2026-01-30 03:54:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-30 03:54:07] ANSI_COLOR="0;31"
[2026-01-30 03:54:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-30 03:54:07] HOME_URL="https://www.centos.org/"
[2026-01-30 03:54:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-30 03:54:07] 
[2026-01-30 03:54:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-30 03:54:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-30 03:54:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-30 03:54:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-30 03:54:07] 
[2026-01-30 03:54:07] 2026-01-30 02:53:13,560 | INFO     | **************************************
[2026-01-30 03:54:07] 2026-01-30 02:53:14,062 | INFO     | executing command: df -mP /tmp/job_11065295/atlas/pilot/slots/0
[2026-01-30 03:54:07] 2026-01-30 02:53:14,069 | INFO     | sufficient remaining disk space (223683280896 B)
[2026-01-30 03:54:07] 2026-01-30 02:53:14,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-30 03:54:07] 2026-01-30 02:53:14,069 | INFO     | current server update state: UPDATING_FINAL
[2026-01-30 03:54:07] 2026-01-30 02:53:14,069 | INFO     | update_server=False
[2026-01-30 03:54:07] 2026-01-30 02:53:14,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-30 03:54:07] 2026-01-30 02:53:14,070 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-30 03:54:07] 2026-01-30 02:53:14,070 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-30 03:54:07] 2026-01-30 02:53:14,070 | INFO     | found 0 job(s) in 20 queues
[2026-01-30 03:54:07] 2026-01-30 02:53:14,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-30 03:54:07] 2026-01-30 02:53:14,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-30 03:54:07] 2026-01-30 02:53:14,104 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-30 03:54:07] 2026-01-30 02:53:14,104 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-30 03:54:07] 2026-01-30 02:53:14,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-30 03:54:07] 2026-01-30 02:53:14,104 | INFO     | will abort loop
[2026-01-30 03:54:07] 2026-01-30 02:53:14,434 | INFO     | all data control threads have been joined
[2026-01-30 03:54:07] 2026-01-30 02:53:14,807 | INFO     | all payload control threads have been joined
[2026-01-30 03:54:07] 2026-01-30 02:53:15,075 | INFO     | [job] retrieve thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:15,075 | INFO     | [job] queue monitor thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:15,109 | INFO     | [job] job monitor thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:15,175 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-30 03:54:07] 2026-01-30 02:53:15,191 | INFO     | [payload] failed_post thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:15,379 | INFO     | all job control threads have been joined
[2026-01-30 03:54:07] 2026-01-30 02:53:15,391 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-30 03:54:07] 2026-01-30 02:53:15,440 | INFO     | [data] control thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:15,753 | INFO     | [payload] execute_payloads thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:15,812 | INFO     | [payload] control thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:15,964 | INFO     | [job] validate thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:15,964 | INFO     | [data] copytool_in thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:16,100 | INFO     | [job] create_data_payload thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:16,384 | INFO     | [job] control thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:16,420 | INFO     | [payload] validate_post thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:16,572 | INFO     | [payload] validate_pre thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:17,180 | INFO     | [data] copytool_out thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:19,397 | INFO     | [data] queue_monitor thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:53:24,456 | INFO     | job.realtimelogging is not enabled
[2026-01-30 03:54:07] 2026-01-30 02:53:25,461 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-30 03:54:07] 2026-01-30 02:54:01,284 | INFO     | [monitor] cgroup control has ended
[2026-01-30 03:54:07] 2026-01-30 02:54:02,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-01-30 03:54:07] 2026-01-30 02:54:03,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-30 03:54:07] 2026-01-30 02:54:03,316 | INFO     | [monitor] control thread has ended
[2026-01-30 03:54:07] 2026-01-30 02:54:07,649 | INFO     | all workflow threads have been joined
[2026-01-30 03:54:07] 2026-01-30 02:54:07,650 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-30 03:54:07] 2026-01-30 02:54:07,650 | INFO     | traces error code: 0
[2026-01-30 03:54:07] 2026-01-30 02:54:07,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-30 03:54:07] 2026-01-30 02:54:07,704 [wrapper] ==== pilot stdout END ====
[2026-01-30 03:54:07] 2026-01-30 02:54:07,705 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-30 03:54:07] 2026-01-30 02:54:07,707 [wrapper] pilotpid: 10458
[2026-01-30 03:54:07] 2026-01-30 02:54:07,708 [wrapper] Pilot exit status: 0
[2026-01-30 03:54:07] 2026-01-30 02:54:07,713 [wrapper] pandaids: 6986091012
[2026-01-30 03:54:07] 2026-01-30 02:54:07,736 [wrapper] cleanup supervisor_pilot  2273 10459
[2026-01-30 03:54:07] 2026-01-30 02:54:07,738 [wrapper] Test setup, not cleaning
[2026-01-30 03:54:07] 2026-01-30 02:54:07,739 [wrapper] apfmon messages muted
[2026-01-30 03:54:07] 2026-01-30 02:54:07,740 [wrapper] ==== wrapper stdout END ====
[2026-01-30 03:54:07] 2026-01-30 02:54:07,741 [wrapper] ==== wrapper stderr END ====
[2026-01-30 03:54:07]  *** Error codes and diagnostics ***
[2026-01-30 03:54:07]     "exeErrorCode": 0,
[2026-01-30 03:54:07]     "exeErrorDiag": "",
[2026-01-30 03:54:07]     "pilotErrorCode": 0,
[2026-01-30 03:54:07]     "pilotErrorDiag": "",
[2026-01-30 03:54:07]  *** Listing of results directory ***
[2026-01-30 03:54:07] total 712708
[2026-01-30 03:54:07] -rwx------ 1 mf493845 unix-user     36322 Jan 28 16:25 runpilot2-wrapper.sh
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user    584422 Jan 28 16:25 pilot3.tar.gz
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user      5111 Jan 28 16:26 queuedata.json
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user       100 Jan 30 00:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-30 03:54:07] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 30 00:48 run_atlas
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user       105 Jan 30 00:48 job.xml
[2026-01-30 03:54:07] -rw-r--r-- 2 mf493845 unix-user    597757 Jan 30 03:03 input.tar.gz
[2026-01-30 03:54:07] -rw-r--r-- 2 mf493845 unix-user 531823933 Jan 30 03:03 EVNT.48310618._000026.pool.root.1
[2026-01-30 03:54:07] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 30 03:03 start_atlas.sh
[2026-01-30 03:54:07] drwxrwx--x 2 mf493845 unix-user       100 Jan 30 03:03 shared
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user      6390 Jan 30 03:03 init_data.xml
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user         0 Jan 30 03:03 boinc_setup_complete
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user      8192 Jan 30 03:03 boinc_mmap_file
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user         0 Jan 30 03:03 boinc_lockfile
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user      2522 Jan 30 03:03 pandaJob.out
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user   1009660 Jan 30 03:03 agis_schedconf.cvmfs.json
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user   1511668 Jan 30 03:03 agis_ddmendpoints.agis.ALL.json
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user       413 Jan 30 03:03 workernode_map.json
[2026-01-30 03:54:07] drwx------ 5 mf493845 unix-user       440 Jan 30 03:03 pilot3
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user        95 Jan 30 03:52 pilot_heartbeat.json
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user 192475315 Jan 30 03:52 HITS.48310620._001106.pool.root.1
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user      1021 Jan 30 03:53 memory_monitor_summary.json
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user    329284 Jan 30 03:53 log.48310620._001106.job.log.tgz.1
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user      6307 Jan 30 03:53 heartbeat.json
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user      4820 Jan 30 03:54 pilotlog.txt
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user    470072 Jan 30 03:54 log.48310620._001106.job.log.1
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user       357 Jan 30 03:54 output.list
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user       620 Jan 30 03:54 runtime_log
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user    819200 Jan 30 03:54 result.tar.gz
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user      9219 Jan 30 03:54 runtime_log.err
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user       641 Jan 30 03:54 jPULDm9aM58n9Rq4apOajLDm4fhM0noT9bVooX4SDmkQGKDmOLknIm.diag
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user     22262 Jan 30 03:54 stderr.txt
[2026-01-30 03:54:07] HITS file was successfully produced:
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user 192475315 Jan 30 03:52 shared/HITS.pool.root.1
[2026-01-30 03:54:07]  *** Contents of shared directory: ***
[2026-01-30 03:54:07] total 708728
[2026-01-30 03:54:07] -rw-r--r-- 2 mf493845 unix-user    597757 Jan 30 03:03 input.tar.gz
[2026-01-30 03:54:07] -rw-r--r-- 2 mf493845 unix-user 531823933 Jan 30 03:03 ATLAS.root_0
[2026-01-30 03:54:07] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 30 03:03 start_atlas.sh
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user 192475315 Jan 30 03:52 HITS.pool.root.1
[2026-01-30 03:54:07] -rw------- 1 mf493845 unix-user    819200 Jan 30 03:54 result.tar.gz
03:54:09 (5613): run_atlas exited; CPU time 19522.635108
03:54:09 (5613): called boinc_finish(0)

</stderr_txt>
]]>

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