Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:52:03 (249727): wrapper (7.7.26015): starting
01:52:03 (249727): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 01:52:03] Arguments: --nthreads 4
[2026-02-04 01:52:03] Threads: 4
[2026-02-04 01:52:03] Checking for CVMFS
[2026-02-04 01:52:03] No cvmfs_config command found, will try listing directly
[2026-02-04 01:52:03] CVMFS is ok
[2026-02-04 01:52:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 01:52:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 01:52:03] Further information can be found at the LHC@home message board.
[2026-02-04 01:52:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 01:52:03] Checking for apptainer binary...
[2026-02-04 01:52:03] which: no apptainer in ((null))
[2026-02-04 01:52:03] apptainer is not installed, using version from CVMFS
[2026-02-04 01:52:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 01:52:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2026-02-04 01:52:04] apptainer works
[2026-02-04 01:52:04] Set ATHENA_PROC_NUMBER=4
[2026-02-04 01:52:04] Set ATHENA_CORE_NUMBER=4
[2026-02-04 01:52:04] Starting ATLAS job with PandaID=6992100751
[2026-02-04 01:52:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 06:56:52]  *** The last 200 lines of the pilot log: ***
[2026-02-04 06:56:52] 2026-02-04 05:55:46,174 | INFO     | mean x: 1770175448.0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,174 | INFO     | mean y: 2349170.2441471573
[2026-02-04 06:56:52] 2026-02-04 05:55:46,175 | INFO     | intersect: -4758305037.204458
[2026-02-04 06:56:52] 2026-02-04 05:55:46,176 | INFO     | chi2: 2.1419028538902616
[2026-02-04 06:56:52] 2026-02-04 05:55:46,176 | INFO     | sum of square deviations: 7879803557.5
[2026-02-04 06:56:52] 2026-02-04 05:55:46,179 | INFO     | sum of deviations: 40113778790.99999
[2026-02-04 06:56:52] 2026-02-04 05:55:46,179 | INFO     | mean x: 1770175295.5
[2026-02-04 06:56:52] 2026-02-04 05:55:46,179 | INFO     | mean y: 2355722.2448979593
[2026-02-04 06:56:52] 2026-02-04 05:55:46,179 | INFO     | intersect: -9009089767.07751
[2026-02-04 06:56:52] 2026-02-04 05:55:46,180 | INFO     | chi2: 1.3752465788170811
[2026-02-04 06:56:52] 2026-02-04 05:55:46,180 | INFO     | current chi2=1.3752465788170811 (change=35.79323281075657 %)
[2026-02-04 06:56:52] 2026-02-04 05:55:46,180 | INFO     | sum of square deviations: 7484568240.0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,183 | INFO     | sum of deviations: 38947461292.0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,183 | INFO     | mean x: 1770175143.0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,183 | INFO     | mean y: 2355272.311418685
[2026-02-04 06:56:52] 2026-02-04 05:55:46,183 | INFO     | intersect: -9209108322.02052
[2026-02-04 06:56:52] 2026-02-04 05:55:46,184 | INFO     | chi2: 1.3756541013430172
[2026-02-04 06:56:52] 2026-02-04 05:55:46,184 | INFO     | current chi2=1.3756541013430172 (change=-0.02963268785490469 %)
[2026-02-04 06:56:52] 2026-02-04 05:55:46,184 | INFO     | right removable region: 288
[2026-02-04 06:56:52] 2026-02-04 05:55:46,185 | INFO     | sum of square deviations: 7879803557.5
[2026-02-04 06:56:52] 2026-02-04 05:55:46,188 | INFO     | sum of deviations: -18548149189.5
[2026-02-04 06:56:52] 2026-02-04 05:55:46,188 | INFO     | mean x: 1770175600.5
[2026-02-04 06:56:52] 2026-02-04 05:55:46,188 | INFO     | mean y: 2364278.962585034
[2026-02-04 06:56:52] 2026-02-04 05:55:46,188 | INFO     | intersect: 4169153576.449047
[2026-02-04 06:56:52] 2026-02-04 05:55:46,188 | INFO     | chi2: 0.8003128517486057
[2026-02-04 06:56:52] 2026-02-04 05:55:46,189 | INFO     | current chi2=0.8003128517486057 (change=62.635427171917435 %)
[2026-02-04 06:56:52] 2026-02-04 05:55:46,189 | INFO     | sum of square deviations: 7484568240.0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,192 | INFO     | sum of deviations: -17074319862.999996
[2026-02-04 06:56:52] 2026-02-04 05:55:46,192 | INFO     | mean x: 1770175753.0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,192 | INFO     | mean y: 2363702.0311418683
[2026-02-04 06:56:52] 2026-02-04 05:55:46,192 | INFO     | intersect: 4040612275.799089
[2026-02-04 06:56:52] 2026-02-04 05:55:46,193 | INFO     | chi2: 0.7965914625098428
[2026-02-04 06:56:52] 2026-02-04 05:55:46,193 | INFO     | current chi2=0.7965914625098428 (change=0.4649918129681398 %)
[2026-02-04 06:56:52] 2026-02-04 05:55:46,193 | INFO     | left removable region: 20
[2026-02-04 06:56:52] 2026-02-04 05:55:46,193 | INFO     | sum of square deviations: 5968658887.0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,196 | INFO     | sum of deviations: 6506144435.5
[2026-02-04 06:56:52] 2026-02-04 05:55:46,196 | INFO     | mean x: 1770175722.5
[2026-02-04 06:56:52] 2026-02-04 05:55:46,196 | INFO     | mean y: 2367755.8097014925
[2026-02-04 06:56:52] 2026-02-04 05:55:46,196 | INFO     | intersect: -1927214608.477381
[2026-02-04 06:56:52] 2026-02-04 05:55:46,197 | INFO     | chi2: 0.004833576943100318
[2026-02-04 06:56:52] 2026-02-04 05:55:46,197 | INFO     | current memory leak: 1.09 B/s (using 268 data points, chi2=0.00)
[2026-02-04 06:56:52] 2026-02-04 05:55:46,197 | INFO     | could have reported an average CPU frequency of 2480 MHz (14 samples)
[2026-02-04 06:56:52] 2026-02-04 05:55:46,197 | INFO     | ..............................
[2026-02-04 06:56:52] 2026-02-04 05:55:46,198 | INFO     | . Timing measurements:
[2026-02-04 06:56:52] 2026-02-04 05:55:46,198 | INFO     | . get job = 0 s
[2026-02-04 06:56:52] 2026-02-04 05:55:46,198 | INFO     | . initial setup = 5 s
[2026-02-04 06:56:52] 2026-02-04 05:55:46,198 | INFO     | . payload setup = 5 s
[2026-02-04 06:56:52] 2026-02-04 05:55:46,198 | INFO     | . stage-in = 0 s
[2026-02-04 06:56:52] 2026-02-04 05:55:46,198 | INFO     | . payload execution = 18186 s
[2026-02-04 06:56:52] 2026-02-04 05:55:46,198 | INFO     | . stage-out = 0 s
[2026-02-04 06:56:52] 2026-02-04 05:55:46,198 | INFO     | . log creation = 0 s
[2026-02-04 06:56:52] 2026-02-04 05:55:46,198 | INFO     | ..............................
[2026-02-04 06:56:52] 2026-02-04 05:55:46,471 | INFO     | 
[2026-02-04 06:56:52] 2026-02-04 05:55:46,472 | INFO     | job summary report
[2026-02-04 06:56:52] 2026-02-04 05:55:46,472 | INFO     | --------------------------------------------------
[2026-02-04 06:56:52] 2026-02-04 05:55:46,472 | INFO     | PanDA job id: 6992100751
[2026-02-04 06:56:52] 2026-02-04 05:55:46,472 | INFO     | task id: 48431080
[2026-02-04 06:56:52] 2026-02-04 05:55:46,472 | INFO     | errors: (none)
[2026-02-04 06:56:52] 2026-02-04 05:55:46,472 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 06:56:52] 2026-02-04 05:55:46,472 | INFO     | pilot state: finished 
[2026-02-04 06:56:52] 2026-02-04 05:55:46,472 | INFO     | transexitcode: 0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,473 | INFO     | exeerrorcode: 0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,473 | INFO     | exeerrordiag: 
[2026-02-04 06:56:52] 2026-02-04 05:55:46,473 | INFO     | exitcode: 0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,473 | INFO     | exitmsg: OK
[2026-02-04 06:56:52] 2026-02-04 05:55:46,473 | INFO     | cpuconsumptiontime: 69951 s
[2026-02-04 06:56:52] 2026-02-04 05:55:46,473 | INFO     | nevents: 400
[2026-02-04 06:56:52] 2026-02-04 05:55:46,473 | INFO     | neventsw: 0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,473 | INFO     | pid: 258080
[2026-02-04 06:56:52] 2026-02-04 05:55:46,474 | INFO     | pgrp: 258080
[2026-02-04 06:56:52] 2026-02-04 05:55:46,474 | INFO     | corecount: 4
[2026-02-04 06:56:52] 2026-02-04 05:55:46,474 | INFO     | event service: False
[2026-02-04 06:56:52] 2026-02-04 05:55:46,474 | INFO     | sizes: {0: 2278115, 1: 2278349, 11: 2278349, 18195: 2310770, 18197: 2319984}
[2026-02-04 06:56:52] 2026-02-04 05:55:46,474 | INFO     | --------------------------------------------------
[2026-02-04 06:56:52] 2026-02-04 05:55:46,474 | INFO     | 
[2026-02-04 06:56:52] 2026-02-04 05:55:46,474 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2026-02-04 06:56:52] 2026-02-04 05:55:46,494 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,494 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,494 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,494 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,495 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,495 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,496 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 06:56:52] 2026-02-04 05:55:46,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,496 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 06:56:52] 2026-02-04 05:55:46,497 | INFO     | job 6992100751 has completed (purged errors)
[2026-02-04 06:56:52] 2026-02-04 05:55:46,497 | INFO     | overall cleanup function is called
[2026-02-04 06:56:52] 2026-02-04 05:55:47,505 | INFO     | --- collectZombieJob: --- 10, [258080]
[2026-02-04 06:56:52] 2026-02-04 05:55:47,505 | INFO     | zombie collector waiting for pid 258080
[2026-02-04 06:56:52] 2026-02-04 05:55:47,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 06:56:52] 2026-02-04 05:55:47,506 | INFO     | collected zombie processes
[2026-02-04 06:56:52] 2026-02-04 05:55:47,506 | INFO     | will attempt to kill all subprocesses of pid=258080
[2026-02-04 06:56:52] 2026-02-04 05:55:47,665 | INFO     | process IDs to be killed: [258080] (in reverse order)
[2026-02-04 06:56:52] 2026-02-04 05:55:47,708 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 06:56:52] 2026-02-04 05:55:47,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 06:56:52] 2026-02-04 05:55:47,712 | INFO     | did not find any defunct processes belonging to 258080
[2026-02-04 06:56:52] 2026-02-04 05:55:47,715 | INFO     | did not find any defunct processes belonging to 258080
[2026-02-04 06:56:52] 2026-02-04 05:55:47,716 | INFO     | ready for new job
[2026-02-04 06:56:52] 2026-02-04 05:55:47,716 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 06:56:52] 2026-02-04 05:55:47,717 | INFO     | **************************************
[2026-02-04 06:56:52] 2026-02-04 05:55:47,717 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 06:56:52] 2026-02-04 05:55:47,717 | INFO     | **************************************
[2026-02-04 06:56:52] 2026-02-04 05:55:47,717 | INFO     | 
[2026-02-04 06:56:52] 2026-02-04 05:55:47,719 | INFO     | architecture information:
[2026-02-04 06:56:52] 2026-02-04 05:55:47,719 | INFO     | executing command: cat /etc/os-release
[2026-02-04 06:56:52] 2026-02-04 05:55:47,727 | INFO     | cat /etc/os-release:
[2026-02-04 06:56:52] NAME="CentOS Linux"
[2026-02-04 06:56:52] VERSION="7 (Core)"
[2026-02-04 06:56:52] ID="centos"
[2026-02-04 06:56:52] ID_LIKE="rhel fedora"
[2026-02-04 06:56:52] VERSION_ID="7"
[2026-02-04 06:56:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 06:56:52] ANSI_COLOR="0;31"
[2026-02-04 06:56:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 06:56:52] HOME_URL="https://www.centos.org/"
[2026-02-04 06:56:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 06:56:52] 
[2026-02-04 06:56:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 06:56:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 06:56:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 06:56:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 06:56:52] 
[2026-02-04 06:56:52] 2026-02-04 05:55:47,727 | INFO     | **************************************
[2026-02-04 06:56:52] 2026-02-04 05:55:48,230 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2026-02-04 06:56:52] 2026-02-04 05:55:48,244 | INFO     | sufficient remaining disk space (1610644193280 B)
[2026-02-04 06:56:52] 2026-02-04 05:55:48,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 06:56:52] 2026-02-04 05:55:48,244 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 06:56:52] 2026-02-04 05:55:48,244 | INFO     | update_server=False
[2026-02-04 06:56:52] 2026-02-04 05:55:48,245 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 06:56:52] 2026-02-04 05:55:48,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 06:56:52] 2026-02-04 05:55:48,245 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 06:56:52] 2026-02-04 05:55:48,257 | INFO     | all payload control threads have been joined
[2026-02-04 06:56:52] 2026-02-04 05:55:48,263 | INFO     | all data control threads have been joined
[2026-02-04 06:56:52] 2026-02-04 05:55:49,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 06:56:52] 2026-02-04 05:55:49,250 | INFO     | [job] retrieve thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:49,251 | INFO     | [job] queue monitor thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:49,259 | INFO     | [payload] control thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:49,268 | INFO     | [data] control thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:49,456 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:49,726 | INFO     | all job control threads have been joined
[2026-02-04 06:56:52] 2026-02-04 05:55:49,894 | INFO     | [payload] failed_post thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:49,944 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:49,969 | INFO     | [job] validate thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:49,977 | INFO     | [data] copytool_in thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:50,363 | INFO     | [payload] validate_post thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:50,556 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:50,721 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:50,732 | INFO     | [job] control thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:50,758 | WARNING  | process 258080 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 06:56:52] 2026-02-04 05:55:50,958 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 06:56:52] 2026-02-04 05:55:50,959 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 06:56:52] 2026-02-04 05:55:50,960 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-04 06:56:52] 2026-02-04 05:55:50,960 | WARNING  | maxPSS not found in memory monitor output
[2026-02-04 06:56:52] 2026-02-04 05:55:50,961 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6992100751/payload.stdout) since it has not been created yet
[2026-02-04 06:56:52] 2026-02-04 05:55:50,961 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2026-02-04 06:56:52] 2026-02-04 05:55:50,975 | INFO     | sufficient remaining disk space (1610643144704 B)
[2026-02-04 06:56:52] 2026-02-04 05:55:50,975 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-04 06:56:52] 2026-02-04 05:55:50,976 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6992100751/HITS.48431080._000582.pool.root.1 since it does not exist
[2026-02-04 06:56:52] 2026-02-04 05:55:51,058 | INFO     | [data] copytool_out thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:51,249 | INFO     | number of running child processes to parent process 258080: 1
[2026-02-04 06:56:52] 2026-02-04 05:55:51,249 | INFO     | maximum number of monitored processes: 6
[2026-02-04 06:56:52] 2026-02-04 05:55:51,249 | INFO     | aborting job monitoring since job object (job id=6992100751) has expired
[2026-02-04 06:56:52] 2026-02-04 05:55:51,249 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 06:56:52] 2026-02-04 05:55:51,249 | INFO     | will abort loop
[2026-02-04 06:56:52] 2026-02-04 05:55:52,251 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:55:52,255 | INFO     | [job] job monitor thread has finished
[2026-02-04 06:56:52] 2026-02-04 05:56:19,197 | INFO     | PID=253423 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 06:56:52] 2026-02-04 05:56:19,198 | INFO     | .. there are 4 such processes running
[2026-02-04 06:56:52] 2026-02-04 05:56:19,198 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 06:56:52] 2026-02-04 05:56:19,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 06:56:52] 2026-02-04 05:56:19,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 06:56:52] 2026-02-04 05:56:46,453 | INFO     | [monitor] cgroup control has ended
[2026-02-04 06:56:52] 2026-02-04 05:56:47,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23223576160064)>', '<ExcThread(monitor, started 23223336183552)>']
[2026-02-04 06:56:52] 2026-02-04 05:56:47,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 06:56:52] 2026-02-04 05:56:47,336 | INFO     | [monitor] control thread has ended
[2026-02-04 06:56:52] 2026-02-04 05:56:52,244 | INFO     | all workflow threads have been joined
[2026-02-04 06:56:52] 2026-02-04 05:56:52,244 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 06:56:52] 2026-02-04 05:56:52,245 | INFO     | traces error code: 0
[2026-02-04 06:56:52] 2026-02-04 05:56:52,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 06:56:52] 2026-02-04 05:56:52,344 [wrapper] ==== pilot stdout END ====
[2026-02-04 06:56:52] 2026-02-04 05:56:52,347 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 06:56:52] 2026-02-04 05:56:52,349 [wrapper] pilotpid: 253423
[2026-02-04 06:56:52] 2026-02-04 05:56:52,351 [wrapper] Pilot exit status: 0
[2026-02-04 06:56:52] 2026-02-04 05:56:52,360 [wrapper] pandaids: 6992100751
[2026-02-04 06:56:52] 2026-02-04 05:56:52,406 [wrapper] cleanup supervisor_pilot  471413 253424
[2026-02-04 06:56:52] 2026-02-04 05:56:52,409 [wrapper] Test setup, not cleaning
[2026-02-04 06:56:52] 2026-02-04 05:56:52,411 [wrapper] apfmon messages muted
[2026-02-04 06:56:52] 2026-02-04 05:56:52,413 [wrapper] ==== wrapper stdout END ====
[2026-02-04 06:56:52] 2026-02-04 05:56:52,416 [wrapper] ==== wrapper stderr END ====
[2026-02-04 06:56:52]  *** Error codes and diagnostics ***
[2026-02-04 06:56:52]     "exeErrorCode": 0,
[2026-02-04 06:56:52]     "exeErrorDiag": "",
[2026-02-04 06:56:52]     "pilotErrorCode": 0,
[2026-02-04 06:56:52]     "pilotErrorDiag": "",
[2026-02-04 06:56:52]  *** Listing of results directory ***
[2026-02-04 06:56:52] total 1104800
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc    584422 Jan 29 15:56 pilot3.tar.gz
[2026-02-04 06:56:52] -rwx------ 1 boinc boinc     36322 Jan 29 16:01 runpilot2-wrapper.sh
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc      5111 Jan 29 16:03 queuedata.json
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc       100 Feb  2 16:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 06:56:52] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 16:59 run_atlas
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc       105 Feb  2 16:59 job.xml
[2026-02-04 06:56:52] -rw------- 2 boinc boinc 155123712 Feb  2 17:07 copy_bkrdU9
[2026-02-04 06:56:52] -rw------- 2 boinc boinc  48889856 Feb  3 16:31 copy_X2Y5HY
[2026-02-04 06:56:52] -rw-r--r-- 2 boinc boinc 656174459 Feb  4 01:52 EVNT.48431078._000012.pool.root.1
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc      6422 Feb  4 01:52 init_data.xml
[2026-02-04 06:56:52] drwxrwx--x 2 boinc boinc      4096 Feb  4 01:52 shared
[2026-02-04 06:56:52] -rw-r--r-- 2 boinc boinc    597772 Feb  4 01:52 input.tar.gz
[2026-02-04 06:56:52] -rw-r--r-- 2 boinc boinc     15845 Feb  4 01:52 start_atlas.sh
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc         0 Feb  4 01:52 boinc_lockfile
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc      2555 Feb  4 01:52 pandaJob.out
[2026-02-04 06:56:52] -rw------- 1 boinc boinc   1009228 Feb  4 01:52 agis_schedconf.cvmfs.json
[2026-02-04 06:56:52] -rw------- 1 boinc boinc       454 Feb  4 01:52 workernode_map.json
[2026-02-04 06:56:52] drwx------ 5 boinc boinc      4096 Feb  4 01:52 pilot3
[2026-02-04 06:56:52] -rw------- 1 boinc boinc 261091318 Feb  4 06:54 HITS.48431080._000582.pool.root.1
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc       531 Feb  4 06:55 boinc_task_state.xml
[2026-02-04 06:56:52] -rw------- 1 boinc boinc        95 Feb  4 06:55 pilot_heartbeat.json
[2026-02-04 06:56:52] -rw------- 1 boinc boinc      1037 Feb  4 06:55 memory_monitor_summary.json
[2026-02-04 06:56:52] -rw------- 1 boinc boinc   1511668 Feb  4 06:55 agis_ddmendpoints.agis.ALL.json
[2026-02-04 06:56:52] -rw------- 1 boinc boinc    482163 Feb  4 06:55 log.48431080._000582.job.log.tgz.1
[2026-02-04 06:56:52] -rw------- 1 boinc boinc      6408 Feb  4 06:55 heartbeat.json
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc      8192 Feb  4 06:56 boinc_mmap_file
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc        28 Feb  4 06:56 wrapper_checkpoint.txt
[2026-02-04 06:56:52] -rw------- 1 boinc boinc      6369 Feb  4 06:56 pilotlog.txt
[2026-02-04 06:56:52] -rw------- 1 boinc boinc   2566426 Feb  4 06:56 log.48431080._000582.job.log.1
[2026-02-04 06:56:52] -rw------- 1 boinc boinc       357 Feb  4 06:56 output.list
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc       620 Feb  4 06:56 runtime_log
[2026-02-04 06:56:52] -rw------- 1 boinc boinc   3061760 Feb  4 06:56 result.tar.gz
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc      9205 Feb  4 06:56 runtime_log.err
[2026-02-04 06:56:52] -rw------- 1 boinc boinc       665 Feb  4 06:56 feHMDmehi58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmI1IKDmq4JwZn.diag
[2026-02-04 06:56:52] -rw-r--r-- 1 boinc boinc     21220 Feb  4 06:56 stderr.txt
[2026-02-04 06:56:52] HITS file was successfully produced:
[2026-02-04 06:56:52] -rw------- 1 boinc boinc 261091318 Feb  4 06:54 shared/HITS.pool.root.1
[2026-02-04 06:56:52]  *** Contents of shared directory: ***
[2026-02-04 06:56:52] total 1098604
[2026-02-04 06:56:52] -rw------- 2 boinc boinc 155123712 Feb  2 17:07 copy_bkrdU9
[2026-02-04 06:56:52] -rw------- 2 boinc boinc  48889856 Feb  3 16:31 copy_X2Y5HY
[2026-02-04 06:56:52] -rw-r--r-- 2 boinc boinc 656174459 Feb  4 01:52 ATLAS.root_0
[2026-02-04 06:56:52] -rw-r--r-- 2 boinc boinc    597772 Feb  4 01:52 input.tar.gz
[2026-02-04 06:56:52] -rw-r--r-- 2 boinc boinc     15845 Feb  4 01:52 start_atlas.sh
[2026-02-04 06:56:52] -rw------- 1 boinc boinc 261091318 Feb  4 06:54 HITS.pool.root.1
[2026-02-04 06:56:52] -rw------- 1 boinc boinc   3061760 Feb  4 06:56 result.tar.gz
06:56:54 (249727): run_atlas exited; CPU time 70520.837803
06:56:54 (249727): called boinc_finish(0)

</stderr_txt>
]]>

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