Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:44:51 (22569): wrapper (7.7.26015): starting
01:44:51 (22569): wrapper: running run_atlas (--nthreads 8)
[2026-01-30 01:44:51] Arguments: --nthreads 8
[2026-01-30 01:44:51] Threads: 8
[2026-01-30 01:44:51] Checking for CVMFS
[2026-01-30 01:44:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-30 01:44:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-30 01:44:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-30 01:44:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-30 01:44:51] 2.11.0.0 4414 158408 93464 155660 3 188 4074810 4096000 2502 130560 15 15082652 99.669 9693960 520 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-30 01:44:51] CVMFS is ok
[2026-01-30 01:44:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-30 01:44:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-30 01:44:51] Further information can be found at the LHC@home message board.
[2026-01-30 01:44:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-30 01:44:51] Checking for apptainer binary...
[2026-01-30 01:44:51] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-30 01:44:51] apptainer is not installed, using version from CVMFS
[2026-01-30 01:44:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-30 01:44:51] WARNING: Environment variable TMPDIR already has value [/tmp/job_11065227/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node324
[2026-01-30 01:44:51] apptainer works
[2026-01-30 01:44:51] Set ATHENA_PROC_NUMBER=8
[2026-01-30 01:44:51] Set ATHENA_CORE_NUMBER=8
[2026-01-30 01:44:51] Starting ATLAS job with PandaID=6985856736
[2026-01-30 01:44:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11065227/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-30 02:40:08]  *** The last 200 lines of the pilot log: ***
[2026-01-30 02:40:08]  direct_access_wan=False
[2026-01-30 02:40:08]  domain=
[2026-01-30 02:40:08]  filesize=327589
[2026-01-30 02:40:08]  filetype=log
[2026-01-30 02:40:08]  guid=a9c96ac4-c85a-460b-8091-3cefe2bd357e
[2026-01-30 02:40:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-30 02:40:08]  is_altstaged=None
[2026-01-30 02:40:08]  is_tar=False
[2026-01-30 02:40:08]  lfn=log.48317911._005455.job.log.tgz.1
[2026-01-30 02:40:08]  mtime=0
[2026-01-30 02:40:08]  protocol_id=None
[2026-01-30 02:40:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-30 02:40:08]  replicas=None
[2026-01-30 02:40:08]  scope=mc23_13p6TeV
[2026-01-30 02:40:08]  status=None
[2026-01-30 02:40:08]  status_code=0
[2026-01-30 02:40:08]  storage_token=
[2026-01-30 02:40:08]  surl=/tmp/job_11065227/atlas/pilot/slots/0/PanDA_Pilot-6985856736/log.48317911._005455.job.log.tgz.1
[2026-01-30 02:40:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/4c/log.48317911._005455.job.log.tgz.1
[2026-01-30 02:40:08]  workdir=None
[2026-01-30 02:40:08] ]
[2026-01-30 02:40:08] 2026-01-30 01:39:18,421 | INFO     | transferring file log.48317911._005455.job.log.tgz.1 from /tmp/job_11065227/atlas/pilot/slots/0/PanDA_Pilot-6985856736/log.48317911._005455.job.log.tgz.1 to /tmp/j
[2026-01-30 02:40:08] 2026-01-30 01:39:18,421 | INFO     | executing command: /usr/bin/env mv /tmp/job_11065227/atlas/pilot/slots/0/PanDA_Pilot-6985856736/log.48317911._005455.job.log.tgz.1 /tmp/job_11065227/atlas/pilot/sl
[2026-01-30 02:40:08] 2026-01-30 01:39:18,429 | INFO     | adding to output.list: log.48317911._005455.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/4c/log.48317911._005455.job.log.tg
[2026-01-30 02:40:08] 2026-01-30 01:39:18,430 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-30 02:40:08] 2026-01-30 01:39:18,430 | INFO     | summary of transferred files:
[2026-01-30 02:40:08] 2026-01-30 01:39:18,430 | INFO     |  -- lfn=log.48317911._005455.job.log.tgz.1, status_code=0, status=transferred
[2026-01-30 02:40:08] 2026-01-30 01:39:18,430 | INFO     | stage-out finished correctly
[2026-01-30 02:40:08] 2026-01-30 01:39:18,477 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-30 02:40:08] 2026-01-30 01:39:19,086 | INFO     | time since job start (3261s) is within the limit (349056.0s)
[2026-01-30 02:40:08] 2026-01-30 01:39:19,411 | INFO     | job 6985856736 has state=finished
[2026-01-30 02:40:08] 2026-01-30 01:39:19,411 | INFO     | preparing for final server update for job 6985856736 in state='finished'
[2026-01-30 02:40:08] 2026-01-30 01:39:19,411 | INFO     | reading metadata from: /tmp/job_11065227/atlas/pilot/slots/0/PanDA_Pilot-6985856736/jobReport.json
[2026-01-30 02:40:08] 2026-01-30 01:39:19,412 | INFO     | added worker_node to metadata from /tmp/job_11065227/atlas/pilot/slots/0/workernode_map.json
[2026-01-30 02:40:08] 2026-01-30 01:39:19,412 | INFO     | this job has now completed (state=finished)
[2026-01-30 02:40:08] 2026-01-30 01:39:19,413 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-30 02:40:08] 2026-01-30 01:39:19,413 | INFO     | log transfer has been attempted: DONE
[2026-01-30 02:40:08] 2026-01-30 01:39:19,413 | INFO     | job 6985856736 has finished - writing final server update
[2026-01-30 02:40:08] 2026-01-30 01:39:19,413 | INFO     | total number of processed events: 400 (read)
[2026-01-30 02:40:08] 2026-01-30 01:39:19,430 | INFO     | using path: /tmp/job_11065227/atlas/pilot/slots/0/PanDA_Pilot-6985856736/memory_monitor_summary.json (trf name=prmon)
[2026-01-30 02:40:08] 2026-01-30 01:39:19,431 | INFO     | extracted standard info from prmon json
[2026-01-30 02:40:08] 2026-01-30 01:39:19,431 | INFO     | extracted standard memory fields from prmon json
[2026-01-30 02:40:08] 2026-01-30 01:39:19,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-30 02:40:08] 2026-01-30 01:39:19,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-30 02:40:08] 2026-01-30 01:39:19,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | fitting pss+swap vs Time
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | sum of square deviations: 32179208.0
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | sum of deviations: -973067364.0000001
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | mean x: 1769735622.0
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | mean y: 2566452.936170213
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | intersect: 53517618056.333015
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | chi2: 0.004258326826915911
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | current memory leak: -30.24 B/s (using 47 data points, chi2=0.00)
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | could have reported an average CPU frequency of 2644 MHz (5 samples)
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | ..............................
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | . Timing measurements:
[2026-01-30 02:40:08] 2026-01-30 01:39:19,432 | INFO     | . get job = 0 s
[2026-01-30 02:40:08] 2026-01-30 01:39:19,433 | INFO     | . initial setup = 2 s
[2026-01-30 02:40:08] 2026-01-30 01:39:19,433 | INFO     | . payload setup = 2 s
[2026-01-30 02:40:08] 2026-01-30 01:39:19,433 | INFO     | . stage-in = 0 s
[2026-01-30 02:40:08] 2026-01-30 01:39:19,433 | INFO     | . payload execution = 3242 s
[2026-01-30 02:40:08] 2026-01-30 01:39:19,433 | INFO     | . stage-out = 0 s
[2026-01-30 02:40:08] 2026-01-30 01:39:19,433 | INFO     | . log creation = 0 s
[2026-01-30 02:40:08] 2026-01-30 01:39:19,433 | INFO     | ..............................
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | 
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | job summary report
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | --------------------------------------------------
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | PanDA job id: 6985856736
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | task id: 48317911
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | errors: (none)
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | pilot state: finished 
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | transexitcode: 0
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | exeerrorcode: 0
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | exeerrordiag: 
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | exitcode: 0
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | exitmsg: OK
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | cpuconsumptiontime: 22809 s
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | nevents: 400
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | neventsw: 0
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | pid: 680
[2026-01-30 02:40:08] 2026-01-30 01:39:19,481 | INFO     | pgrp: 680
[2026-01-30 02:40:08] 2026-01-30 01:39:19,482 | INFO     | corecount: 8
[2026-01-30 02:40:08] 2026-01-30 01:39:19,482 | INFO     | event service: False
[2026-01-30 02:40:08] 2026-01-30 01:39:19,482 | INFO     | sizes: {0: 2278369, 11: 2278369, 3248: 2303947, 3249: 2313031, 3250: 2313201}
[2026-01-30 02:40:08] 2026-01-30 01:39:19,482 | INFO     | --------------------------------------------------
[2026-01-30 02:40:08] 2026-01-30 01:39:19,482 | INFO     | 
[2026-01-30 02:40:08] 2026-01-30 01:39:19,482 | INFO     | executing command: ls -lF /tmp/job_11065227/atlas/pilot/slots/0
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,490 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-30 02:40:08] 2026-01-30 01:39:19,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,491 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-30 02:40:08] 2026-01-30 01:39:19,491 | INFO     | job 6985856736 has completed (purged errors)
[2026-01-30 02:40:08] 2026-01-30 01:39:19,491 | INFO     | overall cleanup function is called
[2026-01-30 02:40:08] 2026-01-30 01:39:20,497 | INFO     | --- collectZombieJob: --- 10, [680]
[2026-01-30 02:40:08] 2026-01-30 01:39:20,497 | INFO     | zombie collector waiting for pid 680
[2026-01-30 02:40:08] 2026-01-30 01:39:20,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-30 02:40:08] 2026-01-30 01:39:20,497 | INFO     | collected zombie processes
[2026-01-30 02:40:08] 2026-01-30 01:39:20,497 | INFO     | will attempt to kill all subprocesses of pid=680
[2026-01-30 02:40:08] 2026-01-30 01:39:20,598 | INFO     | process IDs to be killed: [680] (in reverse order)
[2026-01-30 02:40:08] 2026-01-30 01:39:20,633 | WARNING  | found no corresponding commands to process id(s)
[2026-01-30 02:40:08] 2026-01-30 01:39:20,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-30 02:40:08] 2026-01-30 01:39:20,638 | INFO     | did not find any defunct processes belonging to 680
[2026-01-30 02:40:08] 2026-01-30 01:39:20,641 | INFO     | did not find any defunct processes belonging to 680
[2026-01-30 02:40:08] 2026-01-30 01:39:20,642 | INFO     | ready for new job
[2026-01-30 02:40:08] 2026-01-30 01:39:20,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-30 02:40:08] 2026-01-30 01:39:20,642 | INFO     | **************************************
[2026-01-30 02:40:08] 2026-01-30 01:39:20,642 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-30 02:40:08] 2026-01-30 01:39:20,642 | INFO     | **************************************
[2026-01-30 02:40:08] 2026-01-30 01:39:20,642 | INFO     | 
[2026-01-30 02:40:08] 2026-01-30 01:39:20,657 | INFO     | architecture information:
[2026-01-30 02:40:08] 2026-01-30 01:39:20,657 | INFO     | executing command: cat /etc/os-release
[2026-01-30 02:40:08] 2026-01-30 01:39:20,662 | INFO     | cat /etc/os-release:
[2026-01-30 02:40:08] NAME="CentOS Linux"
[2026-01-30 02:40:08] VERSION="7 (Core)"
[2026-01-30 02:40:08] ID="centos"
[2026-01-30 02:40:08] ID_LIKE="rhel fedora"
[2026-01-30 02:40:08] VERSION_ID="7"
[2026-01-30 02:40:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-30 02:40:08] ANSI_COLOR="0;31"
[2026-01-30 02:40:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-30 02:40:08] HOME_URL="https://www.centos.org/"
[2026-01-30 02:40:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-30 02:40:08] 
[2026-01-30 02:40:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-30 02:40:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-30 02:40:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-30 02:40:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-30 02:40:08] 
[2026-01-30 02:40:08] 2026-01-30 01:39:20,663 | INFO     | **************************************
[2026-01-30 02:40:08] 2026-01-30 01:39:21,165 | INFO     | executing command: df -mP /tmp/job_11065227/atlas/pilot/slots/0
[2026-01-30 02:40:08] 2026-01-30 01:39:21,171 | INFO     | sufficient remaining disk space (221081763840 B)
[2026-01-30 02:40:08] 2026-01-30 01:39:21,171 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-30 02:40:08] 2026-01-30 01:39:21,171 | INFO     | current server update state: UPDATING_FINAL
[2026-01-30 02:40:08] 2026-01-30 01:39:21,171 | INFO     | update_server=False
[2026-01-30 02:40:08] 2026-01-30 01:39:21,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-30 02:40:08] 2026-01-30 01:39:21,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-30 02:40:08] 2026-01-30 01:39:21,303 | INFO     | all payload control threads have been joined
[2026-01-30 02:40:08] 2026-01-30 01:39:21,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-30 02:40:08] 2026-01-30 01:39:21,727 | INFO     | all data control threads have been joined
[2026-01-30 02:40:08] 2026-01-30 01:39:21,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-30 02:40:08] 2026-01-30 01:39:21,882 | INFO     | aborting loop
[2026-01-30 02:40:08] 2026-01-30 01:39:22,171 | INFO     | all job control threads have been joined
[2026-01-30 02:40:08] 2026-01-30 01:39:22,176 | INFO     | [job] retrieve thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:22,177 | INFO     | [job] queue monitor thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:22,262 | INFO     | [payload] validate_post thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:22,308 | INFO     | [payload] control thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:22,639 | INFO     | [job] validate thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:22,732 | INFO     | [data] control thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:22,886 | INFO     | [job] job monitor thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:22,927 | INFO     | [job] create_data_payload thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:23,050 | INFO     | [payload] validate_pre thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:23,064 | INFO     | [data] copytool_in thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:23,177 | INFO     | [job] control thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:23,228 | INFO     | [payload] execute_payloads thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:23,343 | INFO     | [payload] failed_post thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:23,487 | INFO     | [data] copytool_out thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:24,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-30 02:40:08] 2026-01-30 01:39:28,532 | INFO     | [data] queue_monitor thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:32,018 | INFO     | job.realtimelogging is not enabled
[2026-01-30 02:40:08] 2026-01-30 01:39:33,023 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-30 02:40:08] 2026-01-30 01:39:52,270 | INFO     | PID=27315 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-30 02:40:08] 2026-01-30 01:39:52,270 | INFO     | .. there are 3 such processes running
[2026-01-30 02:40:08] 2026-01-30 01:39:52,270 | INFO     | found 0 job(s) in 20 queues
[2026-01-30 02:40:08] 2026-01-30 01:39:52,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-30 02:40:08] 2026-01-30 01:39:52,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-30 02:40:08] 2026-01-30 01:40:03,198 | INFO     | [monitor] cgroup control has ended
[2026-01-30 02:40:08] 2026-01-30 01:40:03,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-01-30 02:40:08] 2026-01-30 01:40:04,330 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-30 02:40:08] 2026-01-30 01:40:04,330 | INFO     | [monitor] control thread has ended
[2026-01-30 02:40:08] 2026-01-30 01:40:08,641 | INFO     | all workflow threads have been joined
[2026-01-30 02:40:08] 2026-01-30 01:40:08,641 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-30 02:40:08] 2026-01-30 01:40:08,642 | INFO     | traces error code: 0
[2026-01-30 02:40:08] 2026-01-30 01:40:08,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-30 02:40:08] 2026-01-30 01:40:08,693 [wrapper] ==== pilot stdout END ====
[2026-01-30 02:40:08] 2026-01-30 01:40:08,694 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-30 02:40:08] 2026-01-30 01:40:08,695 [wrapper] pilotpid: 27315
[2026-01-30 02:40:08] 2026-01-30 01:40:08,696 [wrapper] Pilot exit status: 0
[2026-01-30 02:40:08] 2026-01-30 01:40:08,700 [wrapper] pandaids: 6985856736
[2026-01-30 02:40:08] 2026-01-30 01:40:08,724 [wrapper] cleanup supervisor_pilot 16921 27316
[2026-01-30 02:40:08] 2026-01-30 01:40:08,725 [wrapper] Test setup, not cleaning
[2026-01-30 02:40:08] 2026-01-30 01:40:08,727 [wrapper] apfmon messages muted
[2026-01-30 02:40:08] 2026-01-30 01:40:08,728 [wrapper] ==== wrapper stdout END ====
[2026-01-30 02:40:08] 2026-01-30 01:40:08,729 [wrapper] ==== wrapper stderr END ====
[2026-01-30 02:40:08]  *** Error codes and diagnostics ***
[2026-01-30 02:40:08]     "exeErrorCode": 0,
[2026-01-30 02:40:08]     "exeErrorDiag": "",
[2026-01-30 02:40:08]     "pilotErrorCode": 0,
[2026-01-30 02:40:08]     "pilotErrorDiag": "",
[2026-01-30 02:40:08]  *** Listing of results directory ***
[2026-01-30 02:40:08] total 731080
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user    584422 Jan 28 14:49 pilot3.tar.gz
[2026-01-30 02:40:08] -rwx------ 1 mf493845 unix-user     36322 Jan 28 14:54 runpilot2-wrapper.sh
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user      5111 Jan 28 14:56 queuedata.json
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user       100 Jan 29 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-30 02:40:08] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 29 23:27 run_atlas
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user       105 Jan 29 23:27 job.xml
[2026-01-30 02:40:08] -rw-r--r-- 2 mf493845 unix-user 539581664 Jan 30 01:44 EVNT.48317909._000109.pool.root.1
[2026-01-30 02:40:08] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 30 01:44 start_atlas.sh
[2026-01-30 02:40:08] drwxrwx--x 2 mf493845 unix-user       100 Jan 30 01:44 shared
[2026-01-30 02:40:08] -rw-r--r-- 2 mf493845 unix-user    597757 Jan 30 01:44 input.tar.gz
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user      6390 Jan 30 01:44 init_data.xml
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user         0 Jan 30 01:44 boinc_setup_complete
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user      8192 Jan 30 01:44 boinc_mmap_file
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user         0 Jan 30 01:44 boinc_lockfile
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user      2501 Jan 30 01:44 pandaJob.out
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user   1009660 Jan 30 01:44 agis_schedconf.cvmfs.json
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user   1511668 Jan 30 01:44 agis_ddmendpoints.agis.ALL.json
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user       420 Jan 30 01:44 workernode_map.json
[2026-01-30 02:40:08] drwx------ 5 mf493845 unix-user       440 Jan 30 01:44 pilot3
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user 203454332 Jan 30 02:38 HITS.48317911._005455.pool.root.1
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user      1017 Jan 30 02:39 memory_monitor_summary.json
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user    327589 Jan 30 02:39 log.48317911._005455.job.log.tgz.1
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user      6312 Jan 30 02:39 heartbeat.json
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user        95 Jan 30 02:39 pilot_heartbeat.json
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user      4903 Jan 30 02:40 pilotlog.txt
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user    510161 Jan 30 02:40 log.48317911._005455.job.log.1
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user       357 Jan 30 02:40 output.list
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user       620 Jan 30 02:40 runtime_log
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user    860160 Jan 30 02:40 result.tar.gz
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user      9219 Jan 30 02:40 runtime_log.err
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user       640 Jan 30 02:40 dWBLDmoAL58n9Rq4apOajLDm4fhM0noT9bVooX4SDmzHGKDmfyZKFo.diag
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user     21487 Jan 30 02:40 stderr.txt
[2026-01-30 02:40:08] HITS file was successfully produced:
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user 203454332 Jan 30 02:38 shared/HITS.pool.root.1
[2026-01-30 02:40:08]  *** Contents of shared directory: ***
[2026-01-30 02:40:08] total 727064
[2026-01-30 02:40:08] -rw-r--r-- 2 mf493845 unix-user 539581664 Jan 30 01:44 ATLAS.root_0
[2026-01-30 02:40:08] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 30 01:44 start_atlas.sh
[2026-01-30 02:40:08] -rw-r--r-- 2 mf493845 unix-user    597757 Jan 30 01:44 input.tar.gz
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user 203454332 Jan 30 02:38 HITS.pool.root.1
[2026-01-30 02:40:08] -rw------- 1 mf493845 unix-user    860160 Jan 30 02:40 result.tar.gz
02:40:10 (22569): run_atlas exited; CPU time 22853.401480
02:40:10 (22569): called boinc_finish(0)

</stderr_txt>
]]>

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