Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:21:07 (501366): wrapper (7.7.26015): starting
08:21:07 (501366): wrapper: running run_atlas (--nthreads 3)
[2026-01-30 08:21:07] Arguments: --nthreads 3
[2026-01-30 08:21:07] Threads: 3
[2026-01-30 08:21:07] Checking for CVMFS
[2026-01-30 08:21:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-30 08:21:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-30 08:21:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-30 08:21:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-30 08:21:08] 2.9.2.0 167419 2417 65116 155670 2 50 22283737 36864000 0 130560 0 926464 99.986 64540 14915 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-30 08:21:08] CVMFS is ok
[2026-01-30 08:21:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-30 08:21:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-30 08:21:08] Further information can be found at the LHC@home message board.
[2026-01-30 08:21:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-30 08:21:08] Checking for apptainer binary...
[2026-01-30 08:21:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-30 08:21:08] Running /usr/bin/apptainer --version
[2026-01-30 08:21:08] apptainer version 1.4.2-2.1
[2026-01-30 08:21:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-30 08:21:08] cosA133a
[2026-01-30 08:21:08] apptainer works
[2026-01-30 08:21:08] Set ATHENA_PROC_NUMBER=3
[2026-01-30 08:21:08] Set ATHENA_CORE_NUMBER=3
[2026-01-30 08:21:08] Starting ATLAS job with PandaID=6991964727
[2026-01-30 08:21:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-30 09:57:45]  *** The last 200 lines of the pilot log: ***
[2026-01-30 09:57:45]  storage_token=
[2026-01-30 09:57:45]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6991964727/log.48317892._001878.job.log.tgz.1
[2026-01-30 09:57:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/4b/log.48317892._001878.job.log.tgz.1
[2026-01-30 09:57:45]  workdir=None
[2026-01-30 09:57:45] ]
[2026-01-30 09:57:45] 2026-01-30 08:57:08,073 | INFO     | transferring file log.48317892._001878.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6991964727/log.48317892._001878.job.log.tgz.1 to /local/data/boinc/
[2026-01-30 09:57:45] 2026-01-30 08:57:08,073 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6991964727/log.48317892._001878.job.log.tgz.1 /local/data/boinc/slots/0/log.48317892._0018
[2026-01-30 09:57:45] 2026-01-30 08:57:08,085 | INFO     | adding to output.list: log.48317892._001878.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/4b/log.48317892._001878.job.log.tg
[2026-01-30 09:57:45] 2026-01-30 08:57:08,085 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-30 09:57:45] 2026-01-30 08:57:08,085 | INFO     | summary of transferred files:
[2026-01-30 09:57:45] 2026-01-30 08:57:08,085 | INFO     |  -- lfn=log.48317892._001878.job.log.tgz.1, status_code=0, status=transferred
[2026-01-30 09:57:45] 2026-01-30 08:57:08,085 | INFO     | stage-out finished correctly
[2026-01-30 09:57:45] 2026-01-30 08:57:09,783 | INFO     | time since job start (5746s) is within the limit (349056.0s)
[2026-01-30 09:57:45] 2026-01-30 08:57:10,826 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-30 09:57:45] 2026-01-30 08:57:10,862 | INFO     | PID=505404 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-30 09:57:45] 2026-01-30 08:57:11,794 | WARNING  | process 509836 can no longer be monitored (due to stat problems) - aborting
[2026-01-30 09:57:45] 2026-01-30 08:57:11,794 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6991964727/memory_monitor_summary.json (trf name=prmon)
[2026-01-30 09:57:45] 2026-01-30 08:57:11,794 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6991964727/memory_monitor_summary.json (trf name=prmon)
[2026-01-30 09:57:45] 2026-01-30 08:57:11,795 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-30 09:57:45] 2026-01-30 08:57:11,795 | WARNING  | maxPSS not found in memory monitor output
[2026-01-30 09:57:45] 2026-01-30 08:57:11,795 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3343458 B
[2026-01-30 09:57:45] 2026-01-30 08:57:11,795 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16568 B
[2026-01-30 09:57:45] 2026-01-30 08:57:11,795 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-30 09:57:45] 2026-01-30 08:57:11,806 | INFO     | sufficient remaining disk space (335405907968 B)
[2026-01-30 09:57:45] 2026-01-30 08:57:11,806 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-30 09:57:45] 2026-01-30 08:57:11,806 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6991964727: 3647129 B (within 5033164800 B limit)
[2026-01-30 09:57:45] 2026-01-30 08:57:11,806 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6991964727/HITS.48317892._001878.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-30 09:57:45] 2026-01-30 08:57:11,806 | INFO     | total size of present files: 0 B (workdir size: 3647129 B)
[2026-01-30 09:57:45] 2026-01-30 08:57:11,807 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6991964727/HITS.48317892._001878.pool.root.1 since it does not exist
[2026-01-30 09:57:45] 2026-01-30 08:57:11,840 | INFO     | number of running child processes to parent process 509836: 1
[2026-01-30 09:57:45] 2026-01-30 08:57:11,840 | INFO     | maximum number of monitored processes: 6
[2026-01-30 09:57:45] 2026-01-30 08:57:11,863 | INFO     | time since job start (5748s) is within the limit (349056.0s)
[2026-01-30 09:57:45] 2026-01-30 08:57:13,063 | INFO     | job 6991964727 has state=finished
[2026-01-30 09:57:45] 2026-01-30 08:57:13,064 | INFO     | preparing for final server update for job 6991964727 in state='finished'
[2026-01-30 09:57:45] 2026-01-30 08:57:13,064 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6991964727/jobReport.json
[2026-01-30 09:57:45] 2026-01-30 08:57:13,068 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-30 09:57:45] 2026-01-30 08:57:13,068 | INFO     | this job has now completed (state=finished)
[2026-01-30 09:57:45] 2026-01-30 08:57:13,069 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-30 09:57:45] 2026-01-30 08:57:13,069 | INFO     | log transfer has been attempted: DONE
[2026-01-30 09:57:45] 2026-01-30 08:57:13,069 | INFO     | job 6991964727 has finished - writing final server update
[2026-01-30 09:57:45] 2026-01-30 08:57:13,069 | INFO     | total number of processed events: 400 (read)
[2026-01-30 09:57:45] 2026-01-30 08:57:13,070 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6991964727/memory_monitor_summary.json (trf name=prmon)
[2026-01-30 09:57:45] 2026-01-30 08:57:13,070 | INFO     | extracted standard info from prmon json
[2026-01-30 09:57:45] 2026-01-30 08:57:13,070 | INFO     | extracted standard memory fields from prmon json
[2026-01-30 09:57:45] 2026-01-30 08:57:13,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-30 09:57:45] 2026-01-30 08:57:13,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-30 09:57:45] 2026-01-30 08:57:13,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-30 09:57:45] 2026-01-30 08:57:13,071 | INFO     | fitting pss+swap vs Time
[2026-01-30 09:57:45] 2026-01-30 08:57:13,071 | INFO     | sum of square deviations: 204163828.0
[2026-01-30 09:57:45] 2026-01-30 08:57:13,071 | INFO     | sum of deviations: -15302815447.0
[2026-01-30 09:57:45] 2026-01-30 08:57:13,071 | INFO     | mean x: 1769760631.0
[2026-01-30 09:57:45] 2026-01-30 08:57:13,071 | INFO     | mean y: 2489325.7701149425
[2026-01-30 09:57:45] 2026-01-30 08:57:13,071 | INFO     | intersect: 132652433181.44305
[2026-01-30 09:57:45] 2026-01-30 08:57:13,071 | INFO     | chi2: 0.048930014356900635
[2026-01-30 09:57:45] 2026-01-30 08:57:13,071 | INFO     | current memory leak: -74.95 B/s (using 87 data points, chi2=0.05)
[2026-01-30 09:57:45] 2026-01-30 08:57:13,071 | INFO     | could have reported an average CPU frequency of 4300 MHz (7 samples)
[2026-01-30 09:57:45] 2026-01-30 08:57:13,071 | INFO     | ..............................
[2026-01-30 09:57:45] 2026-01-30 08:57:13,071 | INFO     | . Timing measurements:
[2026-01-30 09:57:45] 2026-01-30 08:57:13,072 | INFO     | . get job = 0 s
[2026-01-30 09:57:45] 2026-01-30 08:57:13,072 | INFO     | . initial setup = 3 s
[2026-01-30 09:57:45] 2026-01-30 08:57:13,072 | INFO     | . payload setup = 5 s
[2026-01-30 09:57:45] 2026-01-30 08:57:13,072 | INFO     | . stage-in = 0 s
[2026-01-30 09:57:45] 2026-01-30 08:57:13,072 | INFO     | . payload execution = 5723 s
[2026-01-30 09:57:45] 2026-01-30 08:57:13,072 | INFO     | . stage-out = 0 s
[2026-01-30 09:57:45] 2026-01-30 08:57:13,072 | INFO     | . log creation = 0 s
[2026-01-30 09:57:45] 2026-01-30 08:57:13,072 | INFO     | ..............................
[2026-01-30 09:57:45] 2026-01-30 08:57:13,326 | INFO     | 
[2026-01-30 09:57:45] 2026-01-30 08:57:13,327 | INFO     | job summary report
[2026-01-30 09:57:45] 2026-01-30 08:57:13,327 | INFO     | --------------------------------------------------
[2026-01-30 09:57:45] 2026-01-30 08:57:13,327 | INFO     | PanDA job id: 6991964727
[2026-01-30 09:57:45] 2026-01-30 08:57:13,327 | INFO     | task id: 48317892
[2026-01-30 09:57:45] 2026-01-30 08:57:13,328 | INFO     | errors: (none)
[2026-01-30 09:57:45] 2026-01-30 08:57:13,328 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-30 09:57:45] 2026-01-30 08:57:13,328 | INFO     | pilot state: finished 
[2026-01-30 09:57:45] 2026-01-30 08:57:13,328 | INFO     | transexitcode: 0
[2026-01-30 09:57:45] 2026-01-30 08:57:13,328 | INFO     | exeerrorcode: 0
[2026-01-30 09:57:45] 2026-01-30 08:57:13,328 | INFO     | exeerrordiag: 
[2026-01-30 09:57:45] 2026-01-30 08:57:13,328 | INFO     | exitcode: 0
[2026-01-30 09:57:45] 2026-01-30 08:57:13,329 | INFO     | exitmsg: OK
[2026-01-30 09:57:45] 2026-01-30 08:57:13,329 | INFO     | cpuconsumptiontime: 16510 s
[2026-01-30 09:57:45] 2026-01-30 08:57:13,329 | INFO     | nevents: 400
[2026-01-30 09:57:45] 2026-01-30 08:57:13,329 | INFO     | neventsw: 0
[2026-01-30 09:57:45] 2026-01-30 08:57:13,329 | INFO     | pid: 509836
[2026-01-30 09:57:45] 2026-01-30 08:57:13,329 | INFO     | pgrp: 509836
[2026-01-30 09:57:45] 2026-01-30 08:57:13,330 | INFO     | corecount: 3
[2026-01-30 09:57:45] 2026-01-30 08:57:13,330 | INFO     | event service: False
[2026-01-30 09:57:45] 2026-01-30 08:57:13,330 | INFO     | sizes: {0: 2278222, 11: 2278222, 5732: 2304974, 5733: 2304973, 5734: 2314033, 5736: 2314089, 5739: 2314439}
[2026-01-30 09:57:45] 2026-01-30 08:57:13,330 | INFO     | --------------------------------------------------
[2026-01-30 09:57:45] 2026-01-30 08:57:13,330 | INFO     | 
[2026-01-30 09:57:45] 2026-01-30 08:57:13,330 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-30 09:57:45] 2026-01-30 08:57:13,376 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,377 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,377 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,377 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,380 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-30 09:57:45] 2026-01-30 08:57:13,380 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,380 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-30 09:57:45] 2026-01-30 08:57:13,380 | INFO     | job 6991964727 has completed (purged errors)
[2026-01-30 09:57:45] 2026-01-30 08:57:13,380 | INFO     | overall cleanup function is called
[2026-01-30 09:57:45] 2026-01-30 08:57:14,387 | INFO     | --- collectZombieJob: --- 10, [509836]
[2026-01-30 09:57:45] 2026-01-30 08:57:14,387 | INFO     | zombie collector waiting for pid 509836
[2026-01-30 09:57:45] 2026-01-30 08:57:14,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-30 09:57:45] 2026-01-30 08:57:14,387 | INFO     | collected zombie processes
[2026-01-30 09:57:45] 2026-01-30 08:57:14,387 | INFO     | will attempt to kill all subprocesses of pid=509836
[2026-01-30 09:57:45] 2026-01-30 08:57:14,423 | INFO     | process IDs to be killed: [509836] (in reverse order)
[2026-01-30 09:57:45] 2026-01-30 08:57:14,447 | WARNING  | found no corresponding commands to process id(s)
[2026-01-30 09:57:45] 2026-01-30 08:57:14,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-30 09:57:45] 2026-01-30 08:57:14,448 | INFO     | did not find any defunct processes belonging to 509836
[2026-01-30 09:57:45] 2026-01-30 08:57:14,449 | INFO     | did not find any defunct processes belonging to 509836
[2026-01-30 09:57:45] 2026-01-30 08:57:14,449 | INFO     | ready for new job
[2026-01-30 09:57:45] 2026-01-30 08:57:14,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-30 09:57:45] 2026-01-30 08:57:14,450 | INFO     | **************************************
[2026-01-30 09:57:45] 2026-01-30 08:57:14,450 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-30 09:57:45] 2026-01-30 08:57:14,450 | INFO     | **************************************
[2026-01-30 09:57:45] 2026-01-30 08:57:14,450 | INFO     | 
[2026-01-30 09:57:45] 2026-01-30 08:57:14,450 | INFO     | architecture information:
[2026-01-30 09:57:45] 2026-01-30 08:57:14,450 | INFO     | executing command: cat /etc/os-release
[2026-01-30 09:57:45] 2026-01-30 08:57:14,461 | INFO     | cat /etc/os-release:
[2026-01-30 09:57:45] NAME="CentOS Linux"
[2026-01-30 09:57:45] VERSION="7 (Core)"
[2026-01-30 09:57:45] ID="centos"
[2026-01-30 09:57:45] ID_LIKE="rhel fedora"
[2026-01-30 09:57:45] VERSION_ID="7"
[2026-01-30 09:57:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-30 09:57:45] ANSI_COLOR="0;31"
[2026-01-30 09:57:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-30 09:57:45] HOME_URL="https://www.centos.org/"
[2026-01-30 09:57:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-30 09:57:45] 
[2026-01-30 09:57:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-30 09:57:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-30 09:57:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-30 09:57:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-30 09:57:45] 
[2026-01-30 09:57:45] 2026-01-30 08:57:14,461 | INFO     | **************************************
[2026-01-30 09:57:45] 2026-01-30 08:57:14,963 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-30 09:57:45] 2026-01-30 08:57:14,977 | INFO     | sufficient remaining disk space (335410102272 B)
[2026-01-30 09:57:45] 2026-01-30 08:57:14,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-30 09:57:45] 2026-01-30 08:57:14,978 | INFO     | current server update state: UPDATING_FINAL
[2026-01-30 09:57:45] 2026-01-30 08:57:14,978 | INFO     | update_server=False
[2026-01-30 09:57:45] 2026-01-30 08:57:14,978 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-30 09:57:45] 2026-01-30 08:57:14,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-30 09:57:45] 2026-01-30 08:57:15,129 | INFO     | all data control threads have been joined
[2026-01-30 09:57:45] 2026-01-30 08:57:15,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-30 09:57:45] 2026-01-30 08:57:15,350 | INFO     | aborting loop
[2026-01-30 09:57:45] 2026-01-30 08:57:15,482 | INFO     | all payload control threads have been joined
[2026-01-30 09:57:45] 2026-01-30 08:57:15,852 | INFO     | all job control threads have been joined
[2026-01-30 09:57:45] 2026-01-30 08:57:15,983 | INFO     | [job] retrieve thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:15,984 | INFO     | [job] queue monitor thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:16,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-30 09:57:45] 2026-01-30 08:57:16,134 | INFO     | [data] copytool_in thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:16,135 | INFO     | [data] control thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:16,246 | INFO     | [payload] validate_post thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:16,323 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:16,355 | INFO     | [job] job monitor thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:16,488 | INFO     | [payload] control thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:16,808 | INFO     | [payload] execute_payloads thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:16,858 | INFO     | [job] control thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:16,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-30 09:57:45] 2026-01-30 08:57:17,306 | INFO     | [payload] failed_post thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:17,449 | INFO     | [job] validate thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:17,484 | INFO     | [job] create_data_payload thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:17,485 | INFO     | [payload] validate_pre thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:18,135 | INFO     | [data] copytool_out thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:20,868 | INFO     | [data] queue_monitor thread has finished
[2026-01-30 09:57:45] 2026-01-30 08:57:31,013 | INFO     | [monitor] cgroup control has ended
[2026-01-30 09:57:45] 2026-01-30 08:57:33,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309863630656)>', '<ExcThread(monitor, started 140309358946048)>']
[2026-01-30 09:57:45] 2026-01-30 08:57:38,094 | INFO     | all workflow threads have been joined
[2026-01-30 09:57:45] 2026-01-30 08:57:38,094 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-30 09:57:45] 2026-01-30 08:57:38,095 | INFO     | traces error code: 0
[2026-01-30 09:57:45] 2026-01-30 08:57:38,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-30 09:57:45] 2026-01-30 08:57:44,976 | INFO     | PID=505404 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-30 09:57:45] 2026-01-30 08:57:44,976 | INFO     | found 0 job(s) in 20 queues
[2026-01-30 09:57:45] 2026-01-30 08:57:44,976 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-30 09:57:45] 2026-01-30 08:57:44,976 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-30 09:57:45] 2026-01-30 08:57:44,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-30 09:57:45] 2026-01-30 08:57:44,976 | INFO     | [monitor] control thread has ended
[2026-01-30 09:57:45] 2026-01-30 08:57:45,018 [wrapper] ==== pilot stdout END ====
[2026-01-30 09:57:45] 2026-01-30 08:57:45,021 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-30 09:57:45] 2026-01-30 08:57:45,024 [wrapper] pilotpid: 505404
[2026-01-30 09:57:45] 2026-01-30 08:57:45,027 [wrapper] Pilot exit status: 0
[2026-01-30 09:57:45] 2026-01-30 08:57:45,035 [wrapper] pandaids: 6991964727
[2026-01-30 09:57:45] 2026-01-30 08:57:45,050 [wrapper] cleanup supervisor_pilot  515403 505405
[2026-01-30 09:57:45] 2026-01-30 08:57:45,053 [wrapper] Test setup, not cleaning
[2026-01-30 09:57:45] 2026-01-30 08:57:45,055 [wrapper] apfmon messages muted
[2026-01-30 09:57:45] 2026-01-30 08:57:45,057 [wrapper] ==== wrapper stdout END ====
[2026-01-30 09:57:45] 2026-01-30 08:57:45,060 [wrapper] ==== wrapper stderr END ====
[2026-01-30 09:57:45]  *** Error codes and diagnostics ***
[2026-01-30 09:57:45]     "exeErrorCode": 0,
[2026-01-30 09:57:45]     "exeErrorDiag": "",
[2026-01-30 09:57:45]     "pilotErrorCode": 0,
[2026-01-30 09:57:45]     "pilotErrorDiag": "",
[2026-01-30 09:57:45]  *** Listing of results directory ***
[2026-01-30 09:57:45] total 667432
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc    584422 Jan 29 15:56 pilot3.tar.gz
[2026-01-30 09:57:45] -rwx------ 1 boinc boinc     36322 Jan 29 15:59 runpilot2-wrapper.sh
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc      5111 Jan 29 16:01 queuedata.json
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc       100 Jan 30 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-30 09:57:45] -rwxr-xr-x 1 boinc boinc      7986 Jan 30 08:21 run_atlas
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc       105 Jan 30 08:21 job.xml
[2026-01-30 09:57:45] -rw-r--r-- 2 boinc boinc 493392609 Jan 30 08:21 EVNT.48317889._000037.pool.root.1
[2026-01-30 09:57:45] -rw-r--r-- 2 boinc boinc    597755 Jan 30 08:21 input.tar.gz
[2026-01-30 09:57:45] -rw-r--r-- 2 boinc boinc     15845 Jan 30 08:21 start_atlas.sh
[2026-01-30 09:57:45] drwxrwx--x 2 boinc boinc      4096 Jan 30 08:21 shared
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc         0 Jan 30 08:21 boinc_setup_complete
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc      6274 Jan 30 08:21 init_data.xml
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc         0 Jan 30 08:21 boinc_lockfile
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc      2520 Jan 30 08:21 pandaJob.out
[2026-01-30 09:57:45] -rw------- 1 boinc boinc   1009718 Jan 30 08:21 agis_schedconf.cvmfs.json
[2026-01-30 09:57:45] -rw------- 1 boinc boinc   1511668 Jan 30 08:21 agis_ddmendpoints.agis.ALL.json
[2026-01-30 09:57:45] -rw------- 1 boinc boinc       420 Jan 30 08:21 workernode_map.json
[2026-01-30 09:57:45] drwx------ 5 boinc boinc      4096 Jan 30 08:21 pilot3
[2026-01-30 09:57:45] -rw------- 1 boinc boinc 183861995 Jan 30 09:56 HITS.48317892._001878.pool.root.1
[2026-01-30 09:57:45] -rw------- 1 boinc boinc        95 Jan 30 09:56 pilot_heartbeat.json
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc       530 Jan 30 09:56 boinc_task_state.xml
[2026-01-30 09:57:45] -rw------- 1 boinc boinc      1016 Jan 30 09:57 memory_monitor_summary.json
[2026-01-30 09:57:45] -rw------- 1 boinc boinc    296612 Jan 30 09:57 log.48317892._001878.job.log.tgz.1
[2026-01-30 09:57:45] -rw------- 1 boinc boinc      6303 Jan 30 09:57 heartbeat.json
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc      8192 Jan 30 09:57 boinc_mmap_file
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc        27 Jan 30 09:57 wrapper_checkpoint.txt
[2026-01-30 09:57:45] -rw------- 1 boinc boinc       746 Jan 30 09:57 pilotlog.txt
[2026-01-30 09:57:45] -rw------- 1 boinc boinc    835228 Jan 30 09:57 log.48317892._001878.job.log.1
[2026-01-30 09:57:45] -rw------- 1 boinc boinc       357 Jan 30 09:57 output.list
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc       620 Jan 30 09:57 runtime_log
[2026-01-30 09:57:45] -rw------- 1 boinc boinc   1146880 Jan 30 09:57 result.tar.gz
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc      8906 Jan 30 09:57 runtime_log.err
[2026-01-30 09:57:45] -rw------- 1 boinc boinc       659 Jan 30 09:57 SmHODmifi58n9Rq4apOajLDm4fhM0noT9bVooX4SDmmsIKDms08F1m.diag
[2026-01-30 09:57:45] -rw-r--r-- 1 boinc boinc     22639 Jan 30 09:57 stderr.txt
[2026-01-30 09:57:45] HITS file was successfully produced:
[2026-01-30 09:57:45] -rw------- 1 boinc boinc 183861995 Jan 30 09:56 shared/HITS.pool.root.1
[2026-01-30 09:57:45]  *** Contents of shared directory: ***
[2026-01-30 09:57:45] total 663112
[2026-01-30 09:57:45] -rw-r--r-- 2 boinc boinc 493392609 Jan 30 08:21 ATLAS.root_0
[2026-01-30 09:57:45] -rw-r--r-- 2 boinc boinc    597755 Jan 30 08:21 input.tar.gz
[2026-01-30 09:57:45] -rw-r--r-- 2 boinc boinc     15845 Jan 30 08:21 start_atlas.sh
[2026-01-30 09:57:45] -rw------- 1 boinc boinc 183861995 Jan 30 09:56 HITS.pool.root.1
[2026-01-30 09:57:45] -rw------- 1 boinc boinc   1146880 Jan 30 09:57 result.tar.gz
09:57:46 (501366): run_atlas exited; CPU time 16539.171809
09:57:46 (501366): called boinc_finish(0)

</stderr_txt>
]]>

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