Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-05 09:18:27 (20836): vboxwrapper version 26210
2026-02-05 09:18:27 (20836): BOINC client version: 8.2.8
2026-02-05 09:18:28 (20836): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2026-02-05 09:18:28 (20836): Successfully copied 'init_data.xml' to the shared directory.
2026-02-05 09:18:28 (20836): Create VM. (boinc_7b5ad3fa4fd324f4, slot#0)
2026-02-05 09:18:29 (20836): Setting Memory Size for VM. (4800MB)
2026-02-05 09:18:29 (20836): Setting CPU Count for VM. (8)
2026-02-05 09:18:29 (20836): Setting Chipset Options for VM.
2026-02-05 09:18:30 (20836): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-05 09:18:30 (20836): Setting Boot Options for VM.
2026-02-05 09:18:30 (20836): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-05 09:18:31 (20836): Enabling VM Network Access.
2026-02-05 09:18:31 (20836): Disabling USB Support for VM.
2026-02-05 09:18:31 (20836): Disabling COM Port Support for VM.
2026-02-05 09:18:31 (20836): Disabling LPT Port Support for VM.
2026-02-05 09:18:32 (20836): Disabling Audio Support for VM.
2026-02-05 09:18:32 (20836): Disabling Clipboard Support for VM.
2026-02-05 09:18:32 (20836): Disabling Drag and Drop Support for VM.
2026-02-05 09:18:32 (20836): Adding storage controller(s) to VM.
2026-02-05 09:18:33 (20836): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-05 09:18:35 (20836): Adding VirtualBox Guest Additions to VM.
2026-02-05 09:18:35 (20836): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-05 09:18:35 (20836): forwarding host port 62943 to guest port 80
2026-02-05 09:18:36 (20836): Enabling remote desktop for VM.
2026-02-05 09:18:36 (20836): Enabling shared directory for VM.
2026-02-05 09:18:37 (20836): Starting VM using VBoxManage interface. (boinc_7b5ad3fa4fd324f4, slot#0)
2026-02-05 09:18:48 (20836): Successfully started VM. (PID = '20860')
2026-02-05 09:18:48 (20836): Reporting VM Process ID to BOINC.
2026-02-05 09:18:48 (20836): Guest Log: BIOS: VirtualBox 7.0.20
2026-02-05 09:18:48 (20836): Guest Log: CPUID EDX: 0x178bfbff
2026-02-05 09:18:48 (20836): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-05 09:18:48 (20836): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-05 09:18:48 (20836): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-05 09:18:48 (20836): Detected: Web Application Enabled (http://localhost:62943)
2026-02-05 09:18:48 (20836): Detected: Remote Desktop Enabled (localhost:62956)
2026-02-05 09:18:48 (20836): Preference change detected
2026-02-05 09:18:48 (20836): Setting CPU throttle for VM. (100%)
2026-02-05 09:18:48 (20836): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-05 09:18:50 (20836): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-05 09:18:50 (20836): Guest Log: BIOS: Booting from Hard Disk...
2026-02-05 09:18:53 (20836): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-05 09:18:53 (20836): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-05 09:18:53 (20836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-05 09:19:01 (20836): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-05 09:19:01 (20836): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-05 09:19:12 (20836): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-05 09:19:12 (20836): Guest Log: 00:00:00.000340 main     Log opened 2026-02-05T09:19:10.735959000Z
2026-02-05 09:19:12 (20836): Guest Log: 00:00:00.000492 main     OS Product: Linux
2026-02-05 09:19:12 (20836): Guest Log: 00:00:00.000572 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-05 09:19:12 (20836): Guest Log: 00:00:00.000639 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-05 09:19:12 (20836): Guest Log: 00:00:00.000705 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-05 09:19:12 (20836): Guest Log: 00:00:00.000707 main     Process ID: 1371
2026-02-05 09:19:12 (20836): Guest Log: 00:00:00.000708 main     Package type: LINUX_64BITS_GENERIC
2026-02-05 09:19:12 (20836): Guest Log: 00:00:00.003093 main     5.2.32 r132073 started. Verbose level = 0
2026-02-05 09:19:12 (20836): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-05 09:19:12 (20836): Guest Log: [INFO] Mounting shared directory
2026-02-05 09:19:12 (20836): Guest Log: [INFO] Checking for init_data.xml
2026-02-05 09:19:16 (20836): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-05 09:19:16 (20836): Guest Log: [INFO] Detected branch: prod
2026-02-05 09:19:16 (20836): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-05 09:19:16 (20836): Guest Log: Copying input files
2026-02-05 09:19:19 (20836): Guest Log: Copied input files into RunAtlas.
2026-02-05 09:19:19 (20836): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-05 09:19:19 (20836): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-05 09:19:19 (20836): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-05 09:19:19 (20836): Guest Log: Further information can be found at the LHC@home message board.
2026-02-05 09:19:22 (20836): Guest Log: 00:00:10.007988 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 995 312 000ns (GuestNow=1 770 301 161 736 941 000 ns GuestLast=1 770 283 150 741 629 000 ns fSetTimeLastLoop=true )
2026-02-05 09:19:31 (20836): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-05 09:19:31 (20836): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-05 09:19:31 (20836): Guest Log: 2.6.3.0 1652 0 32032 155907 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-05 09:19:32 (20836): Guest Log: copied the webapp to /var/www
2026-02-05 09:19:32 (20836): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-05 09:19:32 (20836): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-05 09:19:32 (20836): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-05 09:19:32 (20836): Guest Log:  *** Starting ATLAS job. (PandaID=6977268764 taskID=48298244) ***
2026-02-05 10:58:55 (20836): Status Report: Elapsed Time: '6000.000000'
2026-02-05 10:58:55 (20836): Status Report: CPU Time: '35998.250000'
2026-02-05 12:39:03 (20836): Status Report: Elapsed Time: '12000.000000'
2026-02-05 12:39:03 (20836): Status Report: CPU Time: '77502.921875'
2026-02-05 14:04:56 (20836): Guest Log:  *** Job finished ***
2026-02-05 14:04:56 (20836): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:41,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:41,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:49,726 | INFO     | [monitor] cgroup control has ended
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:50,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415203391296)>', '<ExcThread(monitor, started 140414468212480)>']
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:50,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:50,591 | INFO     | [monitor] control thread has ended
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,249 | INFO     | all workflow threads have been joined
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,249 | INFO     | end of generic workflow (traces error code: 0)
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,249 | INFO     | traces error code: 0
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,409 [wrapper] ==== pilot stdout END ====
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,419 [wrapper] ==== wrapper stdout RESUME ====
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,429 [wrapper] pilotpid: 6095
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,440 [wrapper] Pilot exit status: 0
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,532 [wrapper] pandaids: 6977268764
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,599 [wrapper] cleanup supervisor_pilot 29211 6096
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,610 [wrapper] Test setup, not cleaning
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,621 [wrapper] apfmon messages muted
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,631 [wrapper] ==== wrapper stdout END ====
2026-02-05 14:04:56 (20836): Guest Log: 2026-02-05 19:04:55,642 [wrapper] ==== wrapper stderr END ====
2026-02-05 14:04:56 (20836): Guest Log:  *** Error codes and diagnostics ***
2026-02-05 14:04:56 (20836): Guest Log:     "exeErrorCode": 0,
2026-02-05 14:04:56 (20836): Guest Log:     "exeErrorDiag": "",
2026-02-05 14:04:56 (20836): Guest Log:     "pilotErrorCode": 0,
2026-02-05 14:04:56 (20836): Guest Log:     "pilotErrorDiag": "",
2026-02-05 14:04:56 (20836): Guest Log:  *** Listing of results directory ***
2026-02-05 14:04:56 (20836): Guest Log: total 187792
2026-02-05 14:04:56 (20836): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 21 06:41 queuedata.json
2026-02-05 14:04:56 (20836): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 21 06:41 pilot3.tar.gz
2026-02-05 14:04:56 (20836): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 21 06:41 runpilot2-wrapper.sh
2026-02-05 14:04:56 (20836): Guest Log: -rwxr-xr-x. 1 atlas atlas     11872 Feb  5 14:19 init_data.xml
2026-02-05 14:04:56 (20836): Guest Log: -rwxr-xr-x. 1 atlas atlas    597772 Feb  5 14:19 input.tar.gz
2026-02-05 14:04:56 (20836): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  5 14:19 start_atlas.sh
2026-02-05 14:04:56 (20836): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  5 14:19 EVNT.48298242._000015.pool.root.1 -> /data/./ATLAS.root_0
2026-02-05 14:04:56 (20836): Guest Log: -rw-r--r--. 1 atlas atlas      2627 Feb  5 14:19 pandaJob.out
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas   1009532 Feb  5 14:20 agis_schedconf.cvmfs.json
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas       427 Feb  5 14:20 workernode_map.json
2026-02-05 14:04:56 (20836): Guest Log: drwx------. 5 atlas atlas      4096 Feb  5 14:20 pilot3
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas 182767732 Feb  5 19:03 HITS.48298244._000364.pool.root.1
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas      1033 Feb  5 19:03 memory_monitor_summary.json
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas        95 Feb  5 19:04 pilot_heartbeat.json
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas   1513144 Feb  5 19:04 agis_ddmendpoints.agis.ALL.json
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas    500534 Feb  5 19:04 log.48298244._000364.job.log.tgz.1
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas      6378 Feb  5 19:04 heartbeat.json
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas      5059 Feb  5 19:04 pilotlog.txt
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas   2328988 Feb  5 19:04 log.48298244._000364.job.log.1
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas       357 Feb  5 19:04 output.list
2026-02-05 14:04:56 (20836): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  5 19:04 runtime_log
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas   2846720 Feb  5 19:04 result.tar.gz
2026-02-05 14:04:56 (20836): Guest Log: -rw-r--r--. 1 atlas atlas      8779 Feb  5 19:04 runtime_log.err
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas       669 Feb  5 19:04 GonLDmf5g28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhQrKDmXzlcHo.diag
2026-02-05 14:04:56 (20836): Guest Log: Looking for outputfile HITS.48298244._000364.pool.root.1
2026-02-05 14:04:56 (20836): Guest Log: HITS file was successfully produced
2026-02-05 14:04:56 (20836): Guest Log: -rw-------. 1 atlas atlas 182767732 Feb  5 19:03 /home/atlas/RunAtlas/HITS.48298244._000364.pool.root.1
2026-02-05 14:04:58 (20836): Guest Log: Successfully finished the ATLAS job!
2026-02-05 14:04:58 (20836): Guest Log: Copying the results back to the shared directory!
2026-02-05 14:04:58 (20836): Guest Log:  *** Contents of shared directory: ***
2026-02-05 14:04:58 (20836): Guest Log: total 436996
2026-02-05 14:04:58 (20836): Guest Log: -rwxrwxrwx. 1 root root 261235220 Feb  5 14:18 ATLAS.root_0
2026-02-05 14:04:58 (20836): Guest Log: -rwxrwxrwx. 1 root root 182767732 Feb  5 19:04 HITS.pool.root.1
2026-02-05 14:04:58 (20836): Guest Log: -rwxrwxrwx. 1 root root     11872 Feb  5 14:18 init_data.xml
2026-02-05 14:04:58 (20836): Guest Log: -rwxrwxrwx. 1 root root    597772 Jan 29 18:23 input.tar.gz
2026-02-05 14:04:58 (20836): Guest Log: -rwxrwxrwx. 1 root root   2846720 Feb  5 19:04 result.tar.gz
2026-02-05 14:04:58 (20836): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 29 18:23 start_atlas.sh
2026-02-05 14:04:58 (20836): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-05 14:04:58 (20836): VM Completion File Detected.
2026-02-05 14:04:58 (20836): Powering off VM.
2026-02-05 14:04:59 (20836): Successfully stopped VM.
2026-02-05 14:04:59 (20836): Deregistering VM. (boinc_7b5ad3fa4fd324f4, slot#0)
2026-02-05 14:05:00 (20836): Removing network bandwidth throttle group from VM.
2026-02-05 14:05:00 (20836): Removing VM from VirtualBox.
2026-02-05 14:05:05 (20836): called boinc_finish(0)

</stderr_txt>
]]>

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