Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:07:31 (919556): wrapper (7.7.26015): starting
04:07:31 (919556): wrapper: running run_atlas (--nthreads 3)
[2026-01-30 04:07:31] Arguments: --nthreads 3
[2026-01-30 04:07:31] Threads: 3
[2026-01-30 04:07:31] Checking for CVMFS
[2026-01-30 04:07:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-30 04:07:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-30 04:07:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-30 04:07:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-30 04:07:33] 2.9.2.0 443122 2098 79432 155662 1 50 25879004 36864000 0 130560 0 959995 99.988 55288 11185 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-30 04:07:33] CVMFS is ok
[2026-01-30 04:07:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-30 04:07:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-30 04:07:33] Further information can be found at the LHC@home message board.
[2026-01-30 04:07:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-30 04:07:33] Checking for apptainer binary...
[2026-01-30 04:07:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-30 04:07:33] Running /usr/bin/apptainer --version
[2026-01-30 04:07:33] apptainer version 1.4.1-1.1
[2026-01-30 04:07:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-30 04:07:33] legendA163
[2026-01-30 04:07:33] apptainer works
[2026-01-30 04:07:33] Set ATHENA_PROC_NUMBER=3
[2026-01-30 04:07:33] Set ATHENA_CORE_NUMBER=3
[2026-01-30 04:07:33] Starting ATLAS job with PandaID=6990940631
[2026-01-30 04:07:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-30 05:40:55]  *** The last 200 lines of the pilot log: ***
[2026-01-30 05:40:55]  direct_access_wan=False
[2026-01-30 05:40:55]  domain=
[2026-01-30 05:40:55]  filesize=285846
[2026-01-30 05:40:55]  filetype=log
[2026-01-30 05:40:55]  guid=6e1e3e98-331e-4602-8c6b-d6f2758c856b
[2026-01-30 05:40:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-30 05:40:55]  is_altstaged=None
[2026-01-30 05:40:55]  is_tar=False
[2026-01-30 05:40:55]  lfn=log.48317892._001367.job.log.tgz.1
[2026-01-30 05:40:55]  mtime=0
[2026-01-30 05:40:55]  protocol_id=None
[2026-01-30 05:40:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-30 05:40:55]  replicas=None
[2026-01-30 05:40:55]  scope=mc23_13p6TeV
[2026-01-30 05:40:55]  status=None
[2026-01-30 05:40:55]  status_code=0
[2026-01-30 05:40:55]  storage_token=
[2026-01-30 05:40:55]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6990940631/log.48317892._001367.job.log.tgz.1
[2026-01-30 05:40:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/76/log.48317892._001367.job.log.tgz.1
[2026-01-30 05:40:55]  workdir=None
[2026-01-30 05:40:55] ]
[2026-01-30 05:40:55] 2026-01-30 04:40:03,927 | INFO     | transferring file log.48317892._001367.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6990940631/log.48317892._001367.job.log.tgz.1 to /local/data/boinc/
[2026-01-30 05:40:55] 2026-01-30 04:40:03,928 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6990940631/log.48317892._001367.job.log.tgz.1 /local/data/boinc/slots/0/log.48317892._0013
[2026-01-30 05:40:55] 2026-01-30 04:40:03,942 | INFO     | adding to output.list: log.48317892._001367.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/76/log.48317892._001367.job.log.tg
[2026-01-30 05:40:55] 2026-01-30 04:40:03,942 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-30 05:40:55] 2026-01-30 04:40:03,942 | INFO     | summary of transferred files:
[2026-01-30 05:40:55] 2026-01-30 04:40:03,942 | INFO     |  -- lfn=log.48317892._001367.job.log.tgz.1, status_code=0, status=transferred
[2026-01-30 05:40:55] 2026-01-30 04:40:03,942 | INFO     | stage-out finished correctly
[2026-01-30 05:40:55] 2026-01-30 04:40:04,202 | INFO     | monitor loop #427: job 0:6990940631 is in state 'finished'
[2026-01-30 05:40:55] 2026-01-30 04:40:04,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-30 05:40:55] 2026-01-30 04:40:04,754 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-30 05:40:55] 2026-01-30 04:40:05,045 | INFO     | time since job start (5541s) is within the limit (349056.0s)
[2026-01-30 05:40:55] 2026-01-30 04:40:05,553 | INFO     | job 6990940631 has state=finished
[2026-01-30 05:40:55] 2026-01-30 04:40:05,553 | INFO     | preparing for final server update for job 6990940631 in state='finished'
[2026-01-30 05:40:55] 2026-01-30 04:40:05,554 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6990940631/jobReport.json
[2026-01-30 05:40:55] 2026-01-30 04:40:05,555 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-30 05:40:55] 2026-01-30 04:40:05,555 | INFO     | this job has now completed (state=finished)
[2026-01-30 05:40:55] 2026-01-30 04:40:05,555 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-30 05:40:55] 2026-01-30 04:40:05,555 | INFO     | log transfer has been attempted: DONE
[2026-01-30 05:40:55] 2026-01-30 04:40:05,555 | INFO     | job 6990940631 has finished - writing final server update
[2026-01-30 05:40:55] 2026-01-30 04:40:05,556 | INFO     | total number of processed events: 400 (read)
[2026-01-30 05:40:55] 2026-01-30 04:40:05,557 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6990940631/memory_monitor_summary.json (trf name=prmon)
[2026-01-30 05:40:55] 2026-01-30 04:40:05,557 | INFO     | extracted standard info from prmon json
[2026-01-30 05:40:55] 2026-01-30 04:40:05,557 | INFO     | extracted standard memory fields from prmon json
[2026-01-30 05:40:55] 2026-01-30 04:40:05,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-30 05:40:55] 2026-01-30 04:40:05,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-30 05:40:55] 2026-01-30 04:40:05,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-30 05:40:55] 2026-01-30 04:40:05,558 | INFO     | fitting pss+swap vs Time
[2026-01-30 05:40:55] 2026-01-30 04:40:05,558 | INFO     | sum of square deviations: 183761585.0
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | sum of deviations: -455697602.50000036
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | mean x: 1769745317.5
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | mean y: 2356641.226190476
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | intersect: 4391025242.557377
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | chi2: 0.016251491293877013
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | current memory leak: -2.48 B/s (using 84 data points, chi2=0.02)
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | could have reported an average CPU frequency of 3532 MHz (7 samples)
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | ..............................
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | . Timing measurements:
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | . get job = 0 s
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | . initial setup = 3 s
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | . payload setup = 3 s
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | . stage-in = 0 s
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | . payload execution = 5520 s
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | . stage-out = 0 s
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | . log creation = 0 s
[2026-01-30 05:40:55] 2026-01-30 04:40:05,559 | INFO     | ..............................
[2026-01-30 05:40:55] 2026-01-30 04:40:05,808 | INFO     | 
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | job summary report
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | --------------------------------------------------
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | PanDA job id: 6990940631
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | task id: 48317892
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | errors: (none)
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | pilot state: finished 
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | transexitcode: 0
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | exeerrorcode: 0
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | exeerrordiag: 
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | exitcode: 0
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | exitmsg: OK
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | cpuconsumptiontime: 15932 s
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | nevents: 400
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | neventsw: 0
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | pid: 928048
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | pgrp: 928048
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | corecount: 3
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | event service: False
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | sizes: {0: 2277961, 1: 2278251, 11: 2278251, 5527: 2305022, 5529: 2314026, 5530: 2314082, 5531: 2314404}
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | --------------------------------------------------
[2026-01-30 05:40:55] 2026-01-30 04:40:05,809 | INFO     | 
[2026-01-30 05:40:55] 2026-01-30 04:40:05,810 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-30 05:40:55] 2026-01-30 04:40:05,825 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,825 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,825 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,825 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | job 6990940631 has completed (purged errors)
[2026-01-30 05:40:55] 2026-01-30 04:40:05,826 | INFO     | overall cleanup function is called
[2026-01-30 05:40:55] 2026-01-30 04:40:06,833 | INFO     | --- collectZombieJob: --- 10, [928048]
[2026-01-30 05:40:55] 2026-01-30 04:40:06,833 | INFO     | zombie collector waiting for pid 928048
[2026-01-30 05:40:55] 2026-01-30 04:40:06,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-30 05:40:55] 2026-01-30 04:40:06,833 | INFO     | collected zombie processes
[2026-01-30 05:40:55] 2026-01-30 04:40:06,833 | INFO     | will attempt to kill all subprocesses of pid=928048
[2026-01-30 05:40:55] 2026-01-30 04:40:06,888 | INFO     | process IDs to be killed: [928048] (in reverse order)
[2026-01-30 05:40:55] 2026-01-30 04:40:06,918 | WARNING  | found no corresponding commands to process id(s)
[2026-01-30 05:40:55] 2026-01-30 04:40:06,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-30 05:40:55] 2026-01-30 04:40:06,920 | INFO     | did not find any defunct processes belonging to 928048
[2026-01-30 05:40:55] 2026-01-30 04:40:06,921 | INFO     | did not find any defunct processes belonging to 928048
[2026-01-30 05:40:55] 2026-01-30 04:40:06,921 | INFO     | ready for new job
[2026-01-30 05:40:55] 2026-01-30 04:40:06,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-30 05:40:55] 2026-01-30 04:40:06,922 | INFO     | **************************************
[2026-01-30 05:40:55] 2026-01-30 04:40:06,922 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-30 05:40:55] 2026-01-30 04:40:06,922 | INFO     | **************************************
[2026-01-30 05:40:55] 2026-01-30 04:40:06,922 | INFO     | 
[2026-01-30 05:40:55] 2026-01-30 04:40:06,923 | INFO     | architecture information:
[2026-01-30 05:40:55] 2026-01-30 04:40:06,923 | INFO     | executing command: cat /etc/os-release
[2026-01-30 05:40:55] 2026-01-30 04:40:06,932 | INFO     | cat /etc/os-release:
[2026-01-30 05:40:55] NAME="CentOS Linux"
[2026-01-30 05:40:55] VERSION="7 (Core)"
[2026-01-30 05:40:55] ID="centos"
[2026-01-30 05:40:55] ID_LIKE="rhel fedora"
[2026-01-30 05:40:55] VERSION_ID="7"
[2026-01-30 05:40:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-30 05:40:55] ANSI_COLOR="0;31"
[2026-01-30 05:40:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-30 05:40:55] HOME_URL="https://www.centos.org/"
[2026-01-30 05:40:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-30 05:40:55] 
[2026-01-30 05:40:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-30 05:40:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-30 05:40:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-30 05:40:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-30 05:40:55] 
[2026-01-30 05:40:55] 2026-01-30 04:40:06,932 | INFO     | **************************************
[2026-01-30 05:40:55] 2026-01-30 04:40:07,435 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-30 05:40:55] 2026-01-30 04:40:07,448 | INFO     | sufficient remaining disk space (375983702016 B)
[2026-01-30 05:40:55] 2026-01-30 04:40:07,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-30 05:40:55] 2026-01-30 04:40:07,449 | INFO     | current server update state: UPDATING_FINAL
[2026-01-30 05:40:55] 2026-01-30 04:40:07,449 | INFO     | update_server=False
[2026-01-30 05:40:55] 2026-01-30 04:40:07,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-30 05:40:55] 2026-01-30 04:40:07,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-30 05:40:55] 2026-01-30 04:40:07,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-30 05:40:55] 2026-01-30 04:40:07,592 | INFO     | all job control threads have been joined
[2026-01-30 05:40:55] 2026-01-30 04:40:07,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-30 05:40:55] 2026-01-30 04:40:07,712 | INFO     | aborting loop
[2026-01-30 05:40:55] 2026-01-30 04:40:07,894 | INFO     | all data control threads have been joined
[2026-01-30 05:40:55] 2026-01-30 04:40:07,954 | INFO     | all payload control threads have been joined
[2026-01-30 05:40:55] 2026-01-30 04:40:08,454 | INFO     | [job] queue monitor thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:08,455 | INFO     | [job] retrieve thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:08,567 | INFO     | [data] copytool_in thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:08,597 | INFO     | [job] control thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:08,717 | INFO     | [job] job monitor thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:08,900 | INFO     | [data] control thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:08,960 | INFO     | [payload] control thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:09,154 | INFO     | [payload] execute_payloads thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:09,251 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:09,455 | INFO     | [data] copytool_out thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:09,589 | INFO     | [payload] validate_post thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:09,815 | INFO     | [payload] failed_post thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:09,832 | INFO     | [job] validate thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:09,875 | INFO     | [job] create_data_payload thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:09,940 | INFO     | [payload] validate_pre thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:10,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-30 05:40:55] 2026-01-30 04:40:14,799 | INFO     | [data] queue_monitor thread has finished
[2026-01-30 05:40:55] 2026-01-30 04:40:38,190 | INFO     | PID=923610 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-30 05:40:55] 2026-01-30 04:40:38,190 | INFO     | found 0 job(s) in 20 queues
[2026-01-30 05:40:55] 2026-01-30 04:40:38,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-30 05:40:55] 2026-01-30 04:40:38,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-30 05:40:55] 2026-01-30 04:40:49,799 | INFO     | [monitor] cgroup control has ended
[2026-01-30 05:40:55] 2026-01-30 04:40:50,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140448485320512)>', '<ExcThread(monitor, started 140447636776704)>']
[2026-01-30 05:40:55] 2026-01-30 04:40:50,249 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-30 05:40:55] 2026-01-30 04:40:50,249 | INFO     | [monitor] control thread has ended
[2026-01-30 05:40:55] 2026-01-30 04:40:55,023 | INFO     | all workflow threads have been joined
[2026-01-30 05:40:55] 2026-01-30 04:40:55,023 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-30 05:40:55] 2026-01-30 04:40:55,024 | INFO     | traces error code: 0
[2026-01-30 05:40:55] 2026-01-30 04:40:55,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-30 05:40:55] 2026-01-30 04:40:55,074 [wrapper] ==== pilot stdout END ====
[2026-01-30 05:40:55] 2026-01-30 04:40:55,077 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-30 05:40:55] 2026-01-30 04:40:55,079 [wrapper] pilotpid: 923610
[2026-01-30 05:40:55] 2026-01-30 04:40:55,082 [wrapper] Pilot exit status: 0
[2026-01-30 05:40:55] 2026-01-30 04:40:55,089 [wrapper] pandaids: 6990940631
[2026-01-30 05:40:55] 2026-01-30 04:40:55,110 [wrapper] cleanup supervisor_pilot  938638 923611
[2026-01-30 05:40:55] 2026-01-30 04:40:55,112 [wrapper] Test setup, not cleaning
[2026-01-30 05:40:55] 2026-01-30 04:40:55,115 [wrapper] apfmon messages muted
[2026-01-30 05:40:55] 2026-01-30 04:40:55,117 [wrapper] ==== wrapper stdout END ====
[2026-01-30 05:40:55] 2026-01-30 04:40:55,120 [wrapper] ==== wrapper stderr END ====
[2026-01-30 05:40:55]  *** Error codes and diagnostics ***
[2026-01-30 05:40:55]     "exeErrorCode": 0,
[2026-01-30 05:40:55]     "exeErrorDiag": "",
[2026-01-30 05:40:55]     "pilotErrorCode": 0,
[2026-01-30 05:40:55]     "pilotErrorDiag": "",
[2026-01-30 05:40:55]  *** Listing of results directory ***
[2026-01-30 05:40:55] total 676384
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc    584422 Jan 29 11:47 pilot3.tar.gz
[2026-01-30 05:40:55] -rwx------ 1 boinc boinc     36322 Jan 29 11:51 runpilot2-wrapper.sh
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc      5111 Jan 29 11:55 queuedata.json
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc       100 Jan 30 04:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-30 05:40:55] -rwxr-xr-x 1 boinc boinc      7986 Jan 30 04:07 run_atlas
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc       105 Jan 30 04:07 job.xml
[2026-01-30 05:40:55] -rw-r--r-- 2 boinc boinc 493585841 Jan 30 04:07 EVNT.48317889._000027.pool.root.1
[2026-01-30 05:40:55] drwxrwx--x 2 boinc boinc      4096 Jan 30 04:07 shared
[2026-01-30 05:40:55] -rw-r--r-- 2 boinc boinc    597755 Jan 30 04:07 input.tar.gz
[2026-01-30 05:40:55] -rw-r--r-- 2 boinc boinc     15845 Jan 30 04:07 start_atlas.sh
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc         0 Jan 30 04:07 boinc_setup_complete
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc      6449 Jan 30 04:07 init_data.xml
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc         0 Jan 30 04:07 boinc_lockfile
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc      2521 Jan 30 04:07 pandaJob.out
[2026-01-30 05:40:55] -rw------- 1 boinc boinc   1009652 Jan 30 04:07 agis_schedconf.cvmfs.json
[2026-01-30 05:40:55] -rw------- 1 boinc boinc   1511668 Jan 30 04:07 agis_ddmendpoints.agis.ALL.json
[2026-01-30 05:40:55] -rw------- 1 boinc boinc       427 Jan 30 04:07 workernode_map.json
[2026-01-30 05:40:55] drwx------ 5 boinc boinc      4096 Jan 30 04:07 pilot3
[2026-01-30 05:40:55] -rw------- 1 boinc boinc 192912044 Jan 30 05:39 HITS.48317892._001367.pool.root.1
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc       530 Jan 30 05:39 boinc_task_state.xml
[2026-01-30 05:40:55] -rw------- 1 boinc boinc      1016 Jan 30 05:39 memory_monitor_summary.json
[2026-01-30 05:40:55] -rw------- 1 boinc boinc    285846 Jan 30 05:40 log.48317892._001367.job.log.tgz.1
[2026-01-30 05:40:55] -rw------- 1 boinc boinc      6300 Jan 30 05:40 heartbeat.json
[2026-01-30 05:40:55] -rw------- 1 boinc boinc        95 Jan 30 05:40 pilot_heartbeat.json
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc      8192 Jan 30 05:40 boinc_mmap_file
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc        27 Jan 30 05:40 wrapper_checkpoint.txt
[2026-01-30 05:40:55] -rw------- 1 boinc boinc      4747 Jan 30 05:40 pilotlog.txt
[2026-01-30 05:40:55] -rw------- 1 boinc boinc    805805 Jan 30 05:40 log.48317892._001367.job.log.1
[2026-01-30 05:40:55] -rw------- 1 boinc boinc       357 Jan 30 05:40 output.list
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc       620 Jan 30 05:40 runtime_log
[2026-01-30 05:40:55] -rw------- 1 boinc boinc   1105920 Jan 30 05:40 result.tar.gz
[2026-01-30 05:40:55] -rw------- 1 boinc boinc       661 Jan 30 05:40 w9QMDmRne58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmufIKDmk58TUn.diag
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc      8916 Jan 30 05:40 runtime_log.err
[2026-01-30 05:40:55] -rw-r--r-- 1 boinc boinc     21068 Jan 30 05:40 stderr.txt
[2026-01-30 05:40:55] HITS file was successfully produced:
[2026-01-30 05:40:55] -rw------- 1 boinc boinc 192912044 Jan 30 05:39 shared/HITS.pool.root.1
[2026-01-30 05:40:55]  *** Contents of shared directory: ***
[2026-01-30 05:40:55] total 672100
[2026-01-30 05:40:55] -rw-r--r-- 2 boinc boinc 493585841 Jan 30 04:07 ATLAS.root_0
[2026-01-30 05:40:55] -rw-r--r-- 2 boinc boinc    597755 Jan 30 04:07 input.tar.gz
[2026-01-30 05:40:55] -rw-r--r-- 2 boinc boinc     15845 Jan 30 04:07 start_atlas.sh
[2026-01-30 05:40:55] -rw------- 1 boinc boinc 192912044 Jan 30 05:39 HITS.pool.root.1
[2026-01-30 05:40:55] -rw------- 1 boinc boinc   1105920 Jan 30 05:40 result.tar.gz
05:40:56 (919556): run_atlas exited; CPU time 15966.967058
05:40:56 (919556): called boinc_finish(0)

</stderr_txt>
]]>

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