Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-29 12:07:40 (4728): vboxwrapper version 26210
2026-01-29 12:07:40 (4728): BOINC client version: 8.2.8
2026-01-29 12:07:42 (4728): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2026-01-29 12:07:43 (4728): Successfully copied 'init_data.xml' to the shared directory.
2026-01-29 12:07:43 (4728): Create VM. (boinc_4290baa2c9213468, slot#6)
2026-01-29 12:07:43 (4728): Setting Memory Size for VM. (4600MB)
2026-01-29 12:07:44 (4728): Setting CPU Count for VM. (6)
2026-01-29 12:07:44 (4728): Setting Chipset Options for VM.
2026-01-29 12:07:44 (4728): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-29 12:07:45 (4728): Setting Boot Options for VM.
2026-01-29 12:07:45 (4728): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-29 12:07:45 (4728): Enabling VM Network Access.
2026-01-29 12:07:46 (4728): Disabling USB Support for VM.
2026-01-29 12:07:46 (4728): Disabling COM Port Support for VM.
2026-01-29 12:07:46 (4728): Disabling LPT Port Support for VM.
2026-01-29 12:07:46 (4728): Disabling Audio Support for VM.
2026-01-29 12:07:47 (4728): Disabling Clipboard Support for VM.
2026-01-29 12:07:47 (4728): Disabling Drag and Drop Support for VM.
2026-01-29 12:07:47 (4728): Adding storage controller(s) to VM.
2026-01-29 12:07:48 (4728): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-29 12:07:50 (4728): Adding VirtualBox Guest Additions to VM.
2026-01-29 12:07:50 (4728): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-29 12:07:50 (4728): forwarding host port 51523 to guest port 80
2026-01-29 12:07:51 (4728): Enabling remote desktop for VM.
2026-01-29 12:07:51 (4728): Required extension pack not installed, remote desktop not enabled.
2026-01-29 12:07:51 (4728): Enabling shared directory for VM.
2026-01-29 12:07:51 (4728): Starting VM using VBoxManage interface. (boinc_4290baa2c9213468, slot#6)
2026-01-29 12:07:58 (4728): Successfully started VM. (PID = '13340')
2026-01-29 12:07:58 (4728): Reporting VM Process ID to BOINC.
2026-01-29 12:07:58 (4728): Guest Log: BIOS: VirtualBox 7.1.6
2026-01-29 12:07:58 (4728): Guest Log: CPUID EDX: 0x178bfbff
2026-01-29 12:07:58 (4728): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-29 12:07:58 (4728): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-29 12:07:58 (4728): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-29 12:07:58 (4728): Detected: Web Application Enabled (http://localhost:51523)
2026-01-29 12:07:58 (4728): Preference change detected
2026-01-29 12:07:58 (4728): Setting CPU throttle for VM. (50%)
2026-01-29 12:07:58 (4728): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-29 12:08:00 (4728): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-29 12:08:00 (4728): Guest Log: BIOS: Booting from Hard Disk...
2026-01-29 12:08:04 (4728): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-29 12:08:04 (4728): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-29 12:08:04 (4728): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-29 12:08:14 (4728): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-29 12:08:14 (4728): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-29 12:08:40 (4728): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-29 12:08:40 (4728): Guest Log: 00:00:00.000141 main     Log opened 2026-01-29T12:08:39.186582000Z
2026-01-29 12:08:40 (4728): Guest Log: 00:00:00.000240 main     OS Product: Linux
2026-01-29 12:08:40 (4728): Guest Log: 00:00:00.000292 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-29 12:08:40 (4728): Guest Log: 00:00:00.000326 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-29 12:08:40 (4728): Guest Log: 00:00:00.000358 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-29 12:08:40 (4728): Guest Log: 00:00:00.000359 main     Process ID: 1345
2026-01-29 12:08:40 (4728): Guest Log: 00:00:00.000360 main     Package type: LINUX_64BITS_GENERIC
2026-01-29 12:08:40 (4728): Guest Log: 00:00:00.002216 main     5.2.32 r132073 started. Verbose level = 0
2026-01-29 12:08:40 (4728): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-29 12:08:40 (4728): Guest Log: [INFO] Mounting shared directory
2026-01-29 12:08:40 (4728): Guest Log: [INFO] Checking for init_data.xml
2026-01-29 12:08:48 (4728): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-29 12:08:48 (4728): Guest Log: [INFO] Detected branch: prod
2026-01-29 12:08:48 (4728): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-29 12:08:48 (4728): Guest Log: Copying input files
2026-01-29 12:08:50 (4728): Guest Log: 00:00:10.011493 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 880 770 000ns (GuestNow=1 769 706 530 071 327 000 ns GuestLast=1 769 688 519 190 557 000 ns fSetTimeLastLoop=true )
2026-01-29 12:08:55 (4728): Guest Log: Copied input files into RunAtlas.
2026-01-29 12:08:56 (4728): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-29 12:08:56 (4728): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-29 12:08:56 (4728): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-29 12:08:56 (4728): Guest Log: Further information can be found at the LHC@home message board.
2026-01-29 12:09:06 (4728): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-29 12:09:06 (4728): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-29 12:09:06 (4728): Guest Log: 2.6.3.0 1628 0 30152 155647 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-29 12:09:10 (4728): Guest Log: copied the webapp to /var/www
2026-01-29 12:09:10 (4728): Guest Log: ATHENA_PROC_NUMBER=6
2026-01-29 12:09:10 (4728): Guest Log: ATHENA_CORE_NUMBER=6
2026-01-29 12:09:10 (4728): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-29 12:09:10 (4728): Guest Log:  *** Starting ATLAS job. (PandaID=6991673631 taskID=48317911) ***
2026-01-29 13:48:04 (4728): Status Report: Elapsed Time: '6000.000000'
2026-01-29 13:48:04 (4728): Status Report: CPU Time: '19945.296875'
2026-01-29 15:28:09 (4728): Status Report: Elapsed Time: '12000.000000'
2026-01-29 15:28:09 (4728): Status Report: CPU Time: '41634.562500'
2026-01-29 16:09:27 (4728): Guest Log:  *** Job finished ***
2026-01-29 16:09:27 (4728): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:08:51,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:08:51,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:19,940 | INFO     | [monitor] cgroup control has ended
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:21,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629844588352)>', '<ExcThread(monitor, started 140629535336192)>']
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:22,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:22,137 | INFO     | [monitor] control thread has ended
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,236 | INFO     | all workflow threads have been joined
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,237 | INFO     | end of generic workflow (traces error code: 0)
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,237 | INFO     | traces error code: 0
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,407 [wrapper] ==== pilot stdout END ====
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,415 [wrapper] ==== wrapper stdout RESUME ====
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,422 [wrapper] pilotpid: 6040
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,426 [wrapper] Pilot exit status: 0
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,500 [wrapper] pandaids: 6991673631
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,535 [wrapper] cleanup supervisor_pilot 28234 6041
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,540 [wrapper] Test setup, not cleaning
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,547 [wrapper] apfmon messages muted
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,551 [wrapper] ==== wrapper stdout END ====
2026-01-29 16:09:27 (4728): Guest Log: 2026-01-29 21:09:26,557 [wrapper] ==== wrapper stderr END ====
2026-01-29 16:09:27 (4728): Guest Log:  *** Error codes and diagnostics ***
2026-01-29 16:09:27 (4728): Guest Log:     "exeErrorCode": 0,
2026-01-29 16:09:27 (4728): Guest Log:     "exeErrorDiag": "",
2026-01-29 16:09:27 (4728): Guest Log:     "pilotErrorCode": 0,
2026-01-29 16:09:27 (4728): Guest Log:     "pilotErrorDiag": "",
2026-01-29 16:09:27 (4728): Guest Log:  *** Listing of results directory ***
2026-01-29 16:09:27 (4728): Guest Log: total 207600
2026-01-29 16:09:27 (4728): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 29 10:47 pilot3.tar.gz
2026-01-29 16:09:27 (4728): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 29 10:48 runpilot2-wrapper.sh
2026-01-29 16:09:27 (4728): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 29 10:50 queuedata.json
2026-01-29 16:09:27 (4728): Guest Log: -rwxr-xr-x. 1 atlas atlas      8775 Jan 29 17:08 init_data.xml
2026-01-29 16:09:27 (4728): Guest Log: -rwxr-xr-x. 1 atlas atlas    597766 Jan 29 17:08 input.tar.gz
2026-01-29 16:09:27 (4728): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 29 17:08 start_atlas.sh
2026-01-29 16:09:27 (4728): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 29 17:08 EVNT.48317909._000029.pool.root.1 -> /data/./ATLAS.root_0
2026-01-29 16:09:27 (4728): Guest Log: -rw-r--r--. 1 atlas atlas      2501 Jan 29 17:09 pandaJob.out
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas   1009660 Jan 29 17:09 agis_schedconf.cvmfs.json
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas       411 Jan 29 17:09 workernode_map.json
2026-01-29 16:09:27 (4728): Guest Log: drwx------. 5 atlas atlas      4096 Jan 29 17:10 pilot3
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas 204017147 Jan 29 21:07 HITS.48317911._005912.pool.root.1
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas      1033 Jan 29 21:08 memory_monitor_summary.json
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas   1511668 Jan 29 21:08 agis_ddmendpoints.agis.ALL.json
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas    421813 Jan 29 21:08 log.48317911._005912.job.log.tgz.1
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas        95 Jan 29 21:08 pilot_heartbeat.json
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas      6326 Jan 29 21:08 heartbeat.json
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 29 21:09 pilotlog.txt
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas   1926336 Jan 29 21:09 log.48317911._005912.job.log.1
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas       357 Jan 29 21:09 output.list
2026-01-29 16:09:27 (4728): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 29 21:09 runtime_log
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas   2365440 Jan 29 21:09 result.tar.gz
2026-01-29 16:09:27 (4728): Guest Log: -rw-r--r--. 1 atlas atlas      8739 Jan 29 21:09 runtime_log.err
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas       657 Jan 29 21:09 QsWMDmzke58n9Rq4apOajLDm4fhM0noT9bVooX4SDmyUIKDmLsfs9n.diag
2026-01-29 16:09:27 (4728): Guest Log: Looking for outputfile HITS.48317911._005912.pool.root.1
2026-01-29 16:09:27 (4728): Guest Log: HITS file was successfully produced
2026-01-29 16:09:27 (4728): Guest Log: -rw-------. 1 atlas atlas 204017147 Jan 29 21:07 /home/atlas/RunAtlas/HITS.48317911._005912.pool.root.1
2026-01-29 16:09:29 (4728): Guest Log: Successfully finished the ATLAS job!
2026-01-29 16:09:29 (4728): Guest Log: Copying the results back to the shared directory!
2026-01-29 16:09:29 (4728): Guest Log:  *** Contents of shared directory: ***
2026-01-29 16:09:29 (4728): Guest Log: total 726752
2026-01-29 16:09:29 (4728): Guest Log: -rwxrwxrwx. 1 root root 537179729 Jan 29 17:07 ATLAS.root_0
2026-01-29 16:09:29 (4728): Guest Log: -rwxrwxrwx. 1 root root 204017147 Jan 29 21:09 HITS.pool.root.1
2026-01-29 16:09:29 (4728): Guest Log: -rwxrwxrwx. 1 root root      8775 Jan 29 17:07 init_data.xml
2026-01-29 16:09:29 (4728): Guest Log: -rwxrwxrwx. 1 root root    597766 Jan 29 16:30 input.tar.gz
2026-01-29 16:09:29 (4728): Guest Log: -rwxrwxrwx. 1 root root   2365440 Jan 29 21:09 result.tar.gz
2026-01-29 16:09:29 (4728): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 29 16:30 start_atlas.sh
2026-01-29 16:09:29 (4728): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-29 16:09:29 (4728): VM Completion File Detected.
2026-01-29 16:09:29 (4728): Powering off VM.
2026-01-29 16:09:30 (4728): Successfully stopped VM.
2026-01-29 16:09:30 (4728): Deregistering VM. (boinc_4290baa2c9213468, slot#6)
2026-01-29 16:09:30 (4728): Removing network bandwidth throttle group from VM.
2026-01-29 16:09:30 (4728): Removing VM from VirtualBox.
2026-01-29 16:09:36 (4728): called boinc_finish(0)

</stderr_txt>
]]>

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