Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:21:13 (37135): wrapper (7.7.26015): starting
09:21:13 (37135): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 09:21:13] Arguments: --nthreads 8
[2026-01-29 09:21:13] Threads: 8
[2026-01-29 09:21:13] Checking for CVMFS
[2026-01-29 09:21:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 09:21:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 09:21:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 09:21:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 09:21:13] 2.11.2.0 5808 262645 120308 155643 2 188 9448210 18432000 2705 130560 0 189112701 99.961 12686121 8388 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-29 09:21:13] CVMFS is ok
[2026-01-29 09:21:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 09:21:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 09:21:13] Further information can be found at the LHC@home message board.
[2026-01-29 09:21:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 09:21:13] Checking for apptainer binary...
[2026-01-29 09:21:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 09:21:13] Running /usr/bin/apptainer --version
[2026-01-29 09:21:13] apptainer version 1.3.2-1.el7
[2026-01-29 09:21:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 09:21:14] c-9-34.aglt2.org
[2026-01-29 09:21:14] apptainer works
[2026-01-29 09:21:14] Set ATHENA_PROC_NUMBER=8
[2026-01-29 09:21:14] Set ATHENA_CORE_NUMBER=8
[2026-01-29 09:21:14] Starting ATLAS job with PandaID=6977299456
[2026-01-29 09:21:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 11:51:48]  *** The last 200 lines of the pilot log: ***
[2026-01-29 11:51:48] 2026-01-29 16:50:42,407 | INFO     | total number of processed events: 400 (read)
[2026-01-29 11:51:48] 2026-01-29 16:50:42,414 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6977299456/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 11:51:48] 2026-01-29 16:50:42,414 | INFO     | extracted standard info from prmon json
[2026-01-29 11:51:48] 2026-01-29 16:50:42,415 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 11:51:48] 2026-01-29 16:50:42,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 11:51:48] 2026-01-29 16:50:42,415 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 11:51:48] 2026-01-29 16:50:42,415 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 11:51:48] 2026-01-29 16:50:42,419 | INFO     | fitting pss+swap vs Time
[2026-01-29 11:51:48] 2026-01-29 16:50:42,420 | INFO     | sum of square deviations: 984941258.0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,421 | INFO     | sum of deviations: 12782994324.000004
[2026-01-29 11:51:48] 2026-01-29 16:50:42,421 | INFO     | mean x: 1769700961.0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,421 | INFO     | mean y: 2500652.7278911564
[2026-01-29 11:51:48] 2026-01-29 16:50:42,421 | INFO     | intersect: -22965445055.60424
[2026-01-29 11:51:48] 2026-01-29 16:50:42,422 | INFO     | chi2: 1.4518031370934472
[2026-01-29 11:51:48] 2026-01-29 16:50:42,422 | INFO     | sum of square deviations: 887813855.5
[2026-01-29 11:51:48] 2026-01-29 16:50:42,423 | INFO     | sum of deviations: 12516777300.5
[2026-01-29 11:51:48] 2026-01-29 16:50:42,423 | INFO     | mean x: 1769700808.5
[2026-01-29 11:51:48] 2026-01-29 16:50:42,424 | INFO     | mean y: 2500235.8380281692
[2026-01-29 11:51:48] 2026-01-29 16:50:42,424 | INFO     | intersect: -24947494373.14935
[2026-01-29 11:51:48] 2026-01-29 16:50:42,424 | INFO     | chi2: 1.453420854179655
[2026-01-29 11:51:48] 2026-01-29 16:50:42,424 | INFO     | current chi2=1.453420854179655 (change=-0.11142812994924668 %)
[2026-01-29 11:51:48] 2026-01-29 16:50:42,424 | INFO     | right removable region: 141
[2026-01-29 11:51:48] 2026-01-29 16:50:42,425 | INFO     | sum of square deviations: 887813855.5
[2026-01-29 11:51:48] 2026-01-29 16:50:42,426 | INFO     | sum of deviations: -8930955710.000004
[2026-01-29 11:51:48] 2026-01-29 16:50:42,426 | INFO     | mean x: 1769701113.5
[2026-01-29 11:51:48] 2026-01-29 16:50:42,426 | INFO     | mean y: 2534229.295774648
[2026-01-29 11:51:48] 2026-01-29 16:50:42,426 | INFO     | intersect: 17804827093.609146
[2026-01-29 11:51:48] 2026-01-29 16:50:42,427 | INFO     | chi2: 0.05798201402004096
[2026-01-29 11:51:48] 2026-01-29 16:50:42,427 | INFO     | current chi2=0.05798201402004096 (change=96.00620686520057 %)
[2026-01-29 11:51:48] 2026-01-29 16:50:42,427 | INFO     | sum of square deviations: 797291228.0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,428 | INFO     | sum of deviations: -11007483001.0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,428 | INFO     | mean x: 1769701266.0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,428 | INFO     | mean y: 2537634.7518248176
[2026-01-29 11:51:48] 2026-01-29 16:50:42,429 | INFO     | intersect: 24435211566.47001
[2026-01-29 11:51:48] 2026-01-29 16:50:42,429 | INFO     | chi2: 0.02590602921340004
[2026-01-29 11:51:48] 2026-01-29 16:50:42,429 | INFO     | current chi2=0.02590602921340004 (change=55.32057716303912 %)
[2026-01-29 11:51:48] 2026-01-29 16:50:42,429 | INFO     | sum of square deviations: 713140813.0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,430 | INFO     | sum of deviations: -9850975644.000002
[2026-01-29 11:51:48] 2026-01-29 16:50:42,430 | INFO     | mean x: 1769701418.5
[2026-01-29 11:51:48] 2026-01-29 16:50:42,431 | INFO     | mean y: 2535530.606060606
[2026-01-29 11:51:48] 2026-01-29 16:50:42,431 | INFO     | intersect: 24448318541.479336
[2026-01-29 11:51:48] 2026-01-29 16:50:42,431 | INFO     | chi2: 0.02582099735000823
[2026-01-29 11:51:48] 2026-01-29 16:50:42,431 | INFO     | current chi2=0.02582099735000823 (change=0.3282319443530504 %)
[2026-01-29 11:51:48] 2026-01-29 16:50:42,431 | INFO     | left removable region: 30
[2026-01-29 11:51:48] 2026-01-29 16:50:42,432 | INFO     | sum of square deviations: 424045160.0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,432 | INFO     | sum of deviations: -4814849926.0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,433 | INFO     | mean x: 1769701693.0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,433 | INFO     | mean y: 2526083.225225225
[2026-01-29 11:51:48] 2026-01-29 16:50:42,433 | INFO     | intersect: 20096725638.72333
[2026-01-29 11:51:48] 2026-01-29 16:50:42,433 | INFO     | chi2: 0.021945327789473994
[2026-01-29 11:51:48] 2026-01-29 16:50:42,434 | INFO     | current memory leak: -11.35 B/s (using 111 data points, chi2=0.02)
[2026-01-29 11:51:48] 2026-01-29 16:50:42,434 | INFO     | could have reported an average CPU frequency of 2999 MHz (8 samples)
[2026-01-29 11:51:48] 2026-01-29 16:50:42,434 | INFO     | ..............................
[2026-01-29 11:51:48] 2026-01-29 16:50:42,434 | INFO     | . Timing measurements:
[2026-01-29 11:51:48] 2026-01-29 16:50:42,434 | INFO     | . get job = 0 s
[2026-01-29 11:51:48] 2026-01-29 16:50:42,435 | INFO     | . initial setup = 5 s
[2026-01-29 11:51:48] 2026-01-29 16:50:42,435 | INFO     | . payload setup = 4 s
[2026-01-29 11:51:48] 2026-01-29 16:50:42,435 | INFO     | . stage-in = 0 s
[2026-01-29 11:51:48] 2026-01-29 16:50:42,435 | INFO     | . payload execution = 8932 s
[2026-01-29 11:51:48] 2026-01-29 16:50:42,435 | INFO     | . stage-out = 0 s
[2026-01-29 11:51:48] 2026-01-29 16:50:42,435 | INFO     | . log creation = 0 s
[2026-01-29 11:51:48] 2026-01-29 16:50:42,436 | INFO     | ..............................
[2026-01-29 11:51:48] 2026-01-29 16:50:42,531 | INFO     | 
[2026-01-29 11:51:48] 2026-01-29 16:50:42,532 | INFO     | job summary report
[2026-01-29 11:51:48] 2026-01-29 16:50:42,532 | INFO     | --------------------------------------------------
[2026-01-29 11:51:48] 2026-01-29 16:50:42,532 | INFO     | PanDA job id: 6977299456
[2026-01-29 11:51:48] 2026-01-29 16:50:42,532 | INFO     | task id: 48299613
[2026-01-29 11:51:48] 2026-01-29 16:50:42,532 | INFO     | errors: (none)
[2026-01-29 11:51:48] 2026-01-29 16:50:42,532 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 11:51:48] 2026-01-29 16:50:42,532 | INFO     | pilot state: finished 
[2026-01-29 11:51:48] 2026-01-29 16:50:42,532 | INFO     | transexitcode: 0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,532 | INFO     | exeerrorcode: 0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,532 | INFO     | exeerrordiag: 
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | exitcode: 0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | exitmsg: OK
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | cpuconsumptiontime: 66523 s
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | nevents: 400
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | neventsw: 0
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | pid: 45916
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | pgrp: 45916
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | corecount: 8
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | event service: False
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | sizes: {0: 2284176, 1: 2284382, 11: 2284410, 8940: 2312462, 8942: 2321516, 8943: 2321654}
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | --------------------------------------------------
[2026-01-29 11:51:48] 2026-01-29 16:50:42,533 | INFO     | 
[2026-01-29 11:51:48] 2026-01-29 16:50:42,534 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-29 11:51:48] 2026-01-29 16:50:42,547 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,547 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,547 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,547 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,548 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 11:51:48] 2026-01-29 16:50:42,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,549 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 11:51:48] 2026-01-29 16:50:42,549 | INFO     | job 6977299456 has completed (purged errors)
[2026-01-29 11:51:48] 2026-01-29 16:50:42,549 | INFO     | overall cleanup function is called
[2026-01-29 11:51:48] 2026-01-29 16:50:43,556 | INFO     | --- collectZombieJob: --- 10, [45916]
[2026-01-29 11:51:48] 2026-01-29 16:50:43,556 | INFO     | zombie collector waiting for pid 45916
[2026-01-29 11:51:48] 2026-01-29 16:50:43,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 11:51:48] 2026-01-29 16:50:43,557 | INFO     | collected zombie processes
[2026-01-29 11:51:48] 2026-01-29 16:50:43,557 | INFO     | will attempt to kill all subprocesses of pid=45916
[2026-01-29 11:51:48] 2026-01-29 16:50:43,741 | INFO     | process IDs to be killed: [45916] (in reverse order)
[2026-01-29 11:51:48] 2026-01-29 16:50:43,793 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 11:51:48] 2026-01-29 16:50:43,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 11:51:48] 2026-01-29 16:50:43,801 | INFO     | did not find any defunct processes belonging to 45916
[2026-01-29 11:51:48] 2026-01-29 16:50:43,808 | INFO     | did not find any defunct processes belonging to 45916
[2026-01-29 11:51:48] 2026-01-29 16:50:43,808 | INFO     | ready for new job
[2026-01-29 11:51:48] 2026-01-29 16:50:43,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 11:51:48] 2026-01-29 16:50:43,810 | INFO     | **************************************
[2026-01-29 11:51:48] 2026-01-29 16:50:43,811 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 11:51:48] 2026-01-29 16:50:43,811 | INFO     | **************************************
[2026-01-29 11:51:48] 2026-01-29 16:50:43,811 | INFO     | 
[2026-01-29 11:51:48] 2026-01-29 16:50:43,813 | INFO     | architecture information:
[2026-01-29 11:51:48] 2026-01-29 16:50:43,813 | INFO     | executing command: cat /etc/os-release
[2026-01-29 11:51:48] 2026-01-29 16:50:43,824 | INFO     | cat /etc/os-release:
[2026-01-29 11:51:48] NAME="CentOS Linux"
[2026-01-29 11:51:48] VERSION="7 (Core)"
[2026-01-29 11:51:48] ID="centos"
[2026-01-29 11:51:48] ID_LIKE="rhel fedora"
[2026-01-29 11:51:48] VERSION_ID="7"
[2026-01-29 11:51:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 11:51:48] ANSI_COLOR="0;31"
[2026-01-29 11:51:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 11:51:48] HOME_URL="https://www.centos.org/"
[2026-01-29 11:51:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 11:51:48] 
[2026-01-29 11:51:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 11:51:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 11:51:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 11:51:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 11:51:48] 
[2026-01-29 11:51:48] 2026-01-29 16:50:43,824 | INFO     | **************************************
[2026-01-29 11:51:48] 2026-01-29 16:50:44,327 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-29 11:51:48] 2026-01-29 16:50:44,342 | INFO     | sufficient remaining disk space (103364427776 B)
[2026-01-29 11:51:48] 2026-01-29 16:50:44,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 11:51:48] 2026-01-29 16:50:44,342 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 11:51:48] 2026-01-29 16:50:44,343 | INFO     | update_server=False
[2026-01-29 11:51:48] 2026-01-29 16:50:44,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 11:51:48] 2026-01-29 16:50:44,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 11:51:48] 2026-01-29 16:50:44,343 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 11:51:48] 2026-01-29 16:50:44,542 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-29 11:51:48] 2026-01-29 16:50:44,542 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-29 11:51:48] 2026-01-29 16:50:44,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 11:51:48] 2026-01-29 16:50:44,543 | INFO     | will abort loop
[2026-01-29 11:51:48] 2026-01-29 16:50:44,580 | INFO     | all data control threads have been joined
[2026-01-29 11:51:48] 2026-01-29 16:50:45,155 | INFO     | all payload control threads have been joined
[2026-01-29 11:51:48] 2026-01-29 16:50:45,246 | INFO     | all job control threads have been joined
[2026-01-29 11:51:48] 2026-01-29 16:50:45,348 | INFO     | [job] retrieve thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:45,349 | INFO     | [job] queue monitor thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:45,448 | INFO     | [payload] validate_post thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:45,548 | INFO     | [job] job monitor thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:45,586 | INFO     | [data] control thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:46,004 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:46,142 | INFO     | [payload] failed_post thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:46,143 | INFO     | [data] copytool_in thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:46,159 | INFO     | [payload] control thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:46,251 | INFO     | [job] control thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:46,349 | INFO     | [data] copytool_out thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:46,524 | INFO     | [job] validate thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:46,540 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:46,591 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:46,781 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:50:47,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 11:51:48] 2026-01-29 16:50:51,241 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 11:51:48] 2026-01-29 16:51:14,217 | INFO     | PID=40895 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 11:51:48] 2026-01-29 16:51:14,217 | INFO     | .. there are 3 such processes running
[2026-01-29 11:51:48] 2026-01-29 16:51:14,218 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 11:51:48] 2026-01-29 16:51:14,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 11:51:48] 2026-01-29 16:51:14,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 11:51:48] 2026-01-29 16:51:22,224 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-01-29 11:51:48] 2026-01-29 16:51:41,984 | INFO     | [monitor] cgroup control has ended
[2026-01-29 11:51:48] 2026-01-29 16:51:42,694 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464512145216)>', '<ExcThread(monitor, started 140463927445248)>']
[2026-01-29 11:51:48] 2026-01-29 16:51:43,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 11:51:48] 2026-01-29 16:51:43,356 | INFO     | [monitor] control thread has ended
[2026-01-29 11:51:48] 2026-01-29 16:51:47,711 | INFO     | all workflow threads have been joined
[2026-01-29 11:51:48] 2026-01-29 16:51:47,711 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 11:51:48] 2026-01-29 16:51:47,712 | INFO     | traces error code: 0
[2026-01-29 11:51:48] 2026-01-29 16:51:47,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 11:51:48] 2026-01-29 16:51:47,842 [wrapper] ==== pilot stdout END ====
[2026-01-29 11:51:48] 2026-01-29 16:51:47,844 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 11:51:48] 2026-01-29 16:51:47,846 [wrapper] pilotpid: 40895
[2026-01-29 11:51:48] 2026-01-29 16:51:47,848 [wrapper] Pilot exit status: 0
[2026-01-29 11:51:48] 2026-01-29 16:51:47,855 [wrapper] pandaids: 6977299456
[2026-01-29 11:51:48] 2026-01-29 16:51:47,888 [wrapper] cleanup supervisor_pilot 11328 40896
[2026-01-29 11:51:48] 2026-01-29 16:51:47,890 [wrapper] Test setup, not cleaning
[2026-01-29 11:51:48] 2026-01-29 16:51:47,892 [wrapper] apfmon messages muted
[2026-01-29 11:51:48] 2026-01-29 16:51:47,894 [wrapper] ==== wrapper stdout END ====
[2026-01-29 11:51:48] 2026-01-29 16:51:47,897 [wrapper] ==== wrapper stderr END ====
[2026-01-29 11:51:48]  *** Error codes and diagnostics ***
[2026-01-29 11:51:48]     "exeErrorCode": 0,
[2026-01-29 11:51:48]     "exeErrorDiag": "",
[2026-01-29 11:51:48]     "pilotErrorCode": 0,
[2026-01-29 11:51:48]     "pilotErrorDiag": "",
[2026-01-29 11:51:48]  *** Listing of results directory ***
[2026-01-29 11:51:48] total 405684
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas    584422 Jan 21 01:41 pilot3.tar.gz
[2026-01-29 11:51:48] -rwx------ 1 boincer umatlas     36322 Jan 21 01:45 runpilot2-wrapper.sh
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas      5111 Jan 21 01:47 queuedata.json
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas       100 Jan 29 09:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 11:51:48] -rwxr-xr-x 1 boincer umatlas      7986 Jan 29 09:21 run_atlas
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas       105 Jan 29 09:21 job.xml
[2026-01-29 11:51:48] -rw-r--r-- 2 boincer umatlas 251319506 Jan 29 09:21 EVNT.48299611._000002.pool.root.1
[2026-01-29 11:51:48] -rw-r--r-- 2 boincer umatlas     15845 Jan 29 09:21 start_atlas.sh
[2026-01-29 11:51:48] drwxrwx--x 2 boincer umatlas      4096 Jan 29 09:21 shared
[2026-01-29 11:51:48] -rw-r--r-- 2 boincer umatlas    597772 Jan 29 09:21 input.tar.gz
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas         0 Jan 29 09:21 boinc_lockfile
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas      2626 Jan 29 09:21 pandaJob.out
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas        57 Jan 29 09:21 setup.sh.local
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas   1010005 Jan 29 09:21 agis_schedconf.cvmfs.json
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas   1516246 Jan 29 09:21 agis_ddmendpoints.agis.ALL.json
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas       438 Jan 29 09:21 workernode_map.json
[2026-01-29 11:51:48] drwx------ 5 boincer umatlas      4096 Jan 29 09:21 pilot3
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas      6036 Jan 29 11:48 init_data.xml
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas 156845269 Jan 29 11:50 HITS.48299613._000047.pool.root.1
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas       529 Jan 29 11:50 boinc_task_state.xml
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas      1047 Jan 29 11:50 memory_monitor_summary.json
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas    401379 Jan 29 11:50 log.48299613._000047.job.log.tgz.1
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas      6387 Jan 29 11:50 heartbeat.json
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas        95 Jan 29 11:51 pilot_heartbeat.json
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas        27 Jan 29 11:51 wrapper_checkpoint.txt
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas      8192 Jan 29 11:51 boinc_mmap_file
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas      5004 Jan 29 11:51 pilotlog.txt
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas   1252400 Jan 29 11:51 log.48299613._000047.job.log.1
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas       357 Jan 29 11:51 output.list
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas       620 Jan 29 11:51 runtime_log
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas   1669120 Jan 29 11:51 result.tar.gz
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas      9331 Jan 29 11:51 runtime_log.err
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas       655 Jan 29 11:51 muBODmo8g28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgdrKDmS9EAlm.diag
[2026-01-29 11:51:48] -rw-r--r-- 1 boincer umatlas     20998 Jan 29 11:51 stderr.txt
[2026-01-29 11:51:48] HITS file was successfully produced:
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas 156845269 Jan 29 11:50 shared/HITS.pool.root.1
[2026-01-29 11:51:48]  *** Contents of shared directory: ***
[2026-01-29 11:51:48] total 400844
[2026-01-29 11:51:48] -rw-r--r-- 2 boincer umatlas 251319506 Jan 29 09:21 ATLAS.root_0
[2026-01-29 11:51:48] -rw-r--r-- 2 boincer umatlas     15845 Jan 29 09:21 start_atlas.sh
[2026-01-29 11:51:48] -rw-r--r-- 2 boincer umatlas    597772 Jan 29 09:21 input.tar.gz
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas 156845269 Jan 29 11:50 HITS.pool.root.1
[2026-01-29 11:51:48] -rw------- 1 boincer umatlas   1669120 Jan 29 11:51 result.tar.gz
11:51:49 (37135): run_atlas exited; CPU time 66738.055880
11:51:49 (37135): called boinc_finish(0)

</stderr_txt>
]]>

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