Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:52:11 (418017): wrapper (7.7.26015): starting
22:52:11 (418017): wrapper: running run_atlas (--nthreads 4)
[2026-01-29 22:52:11] Arguments: --nthreads 4
[2026-01-29 22:52:11] Threads: 4
[2026-01-29 22:52:11] Checking for CVMFS
[2026-01-29 22:52:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 22:52:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 22:52:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 22:52:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 22:52:12] 2.9.2.0 53194 1934 92472 155654 1 50 23237727 36864001 0 130560 0 1034644 99.991 44337 10347 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-29 22:52:12] CVMFS is ok
[2026-01-29 22:52:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 22:52:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 22:52:12] Further information can be found at the LHC@home message board.
[2026-01-29 22:52:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 22:52:12] Checking for apptainer binary...
[2026-01-29 22:52:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 22:52:12] Running /usr/bin/apptainer --version
[2026-01-29 22:52:12] apptainer version 1.4.1-1.1
[2026-01-29 22:52:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 22:52:12] thA334
[2026-01-29 22:52:12] apptainer works
[2026-01-29 22:52:12] Set ATHENA_PROC_NUMBER=4
[2026-01-29 22:52:12] Set ATHENA_CORE_NUMBER=4
[2026-01-29 22:52:12] Starting ATLAS job with PandaID=6990802636
[2026-01-29 22:52:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 22:55:30]  *** The last 200 lines of the pilot log: ***
[2026-01-29 22:55:30] 2026-01-29 21:55:16,457 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 22:55:30] 2026-01-29 21:55:16,457 | INFO     | **************************************
[2026-01-29 22:55:30] 2026-01-29 21:55:16,457 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 22:55:30] 2026-01-29 21:55:16,458 | INFO     | **************************************
[2026-01-29 22:55:30] 2026-01-29 21:55:16,458 | INFO     | 
[2026-01-29 22:55:30] 2026-01-29 21:55:16,458 | INFO     | architecture information:
[2026-01-29 22:55:30] 2026-01-29 21:55:16,458 | INFO     | executing command: cat /etc/os-release
[2026-01-29 22:55:30] 2026-01-29 21:55:16,471 | INFO     | cat /etc/os-release:
[2026-01-29 22:55:30] NAME="CentOS Linux"
[2026-01-29 22:55:30] VERSION="7 (Core)"
[2026-01-29 22:55:30] ID="centos"
[2026-01-29 22:55:30] ID_LIKE="rhel fedora"
[2026-01-29 22:55:30] VERSION_ID="7"
[2026-01-29 22:55:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 22:55:30] ANSI_COLOR="0;31"
[2026-01-29 22:55:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 22:55:30] HOME_URL="https://www.centos.org/"
[2026-01-29 22:55:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 22:55:30] 
[2026-01-29 22:55:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 22:55:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 22:55:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 22:55:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 22:55:30] 
[2026-01-29 22:55:30] 2026-01-29 21:55:16,471 | INFO     | **************************************
[2026-01-29 22:55:30] 2026-01-29 21:55:16,975 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-29 22:55:30] 2026-01-29 21:55:16,992 | INFO     | sufficient remaining disk space (232888729600 B)
[2026-01-29 22:55:30] 2026-01-29 21:55:16,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 22:55:30] 2026-01-29 21:55:16,992 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 22:55:30] 2026-01-29 21:55:16,992 | INFO     | update_server=False
[2026-01-29 22:55:30] 2026-01-29 21:55:16,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 22:55:30] 2026-01-29 21:55:16,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 22:55:30] 2026-01-29 21:55:16,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 22:55:30] 2026-01-29 21:55:16,993 | INFO     | aborting loop
[2026-01-29 22:55:30] 2026-01-29 21:55:16,993 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-29 22:55:30] 2026-01-29 21:55:16,993 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 22:55:30] 2026-01-29 21:55:16,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 22:55:30] 2026-01-29 21:55:16,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 22:55:30] 2026-01-29 21:55:17,076 | INFO     | all data control threads have been joined
[2026-01-29 22:55:30] 2026-01-29 21:55:17,894 | INFO     | all job control threads have been joined
[2026-01-29 22:55:30] 2026-01-29 21:55:17,998 | INFO     | [job] queue monitor thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:17,999 | INFO     | [job] retrieve thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:17,999 | INFO     | [job] job monitor thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:18,010 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:18,082 | INFO     | [data] control thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:18,094 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:18,168 | INFO     | [payload] failed_post thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:18,210 | INFO     | [data] copytool_in thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:18,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 22:55:30] 2026-01-29 21:55:18,402 | INFO     | all payload control threads have been joined
[2026-01-29 22:55:30] 2026-01-29 21:55:18,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 22:55:30] 2026-01-29 21:55:18,899 | INFO     | [job] control thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:19,061 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:19,217 | INFO     | [payload] validate_post thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:19,217 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:19,398 | INFO     | [job] validate thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:19,407 | INFO     | [payload] control thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:20,307 | INFO     | [data] copytool_out thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:22,600 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 22:55:30] 2026-01-29 21:55:23,598 | INFO     | [monitor] cgroup control has ended
[2026-01-29 22:55:30] 2026-01-29 21:55:24,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140107325921088)>', '<ExcThread(monitor, started 140106295916288)>']
[2026-01-29 22:55:30] 2026-01-29 21:55:25,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 22:55:30] 2026-01-29 21:55:25,037 | INFO     | [monitor] control thread has ended
[2026-01-29 22:55:30] 2026-01-29 21:55:29,931 | INFO     | all workflow threads have been joined
[2026-01-29 22:55:30] 2026-01-29 21:55:29,931 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 22:55:30] 2026-01-29 21:55:29,931 | INFO     | traces error code: 0
[2026-01-29 22:55:30] 2026-01-29 21:55:29,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 22:55:30] 2026-01-29 21:55:29,995 [wrapper] ==== pilot stdout END ====
[2026-01-29 22:55:30] 2026-01-29 21:55:29,999 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 22:55:30] 2026-01-29 21:55:30,003 [wrapper] pilotpid: 422130
[2026-01-29 22:55:30] 2026-01-29 21:55:30,007 [wrapper] Pilot exit status: 0
[2026-01-29 22:55:30] 2026-01-29 21:55:30,018 [wrapper] pandaids: 6990802636
[2026-01-29 22:55:30] 2026-01-29 21:55:30,039 [wrapper] cleanup supervisor_pilot  422136 422131
[2026-01-29 22:55:30] 2026-01-29 21:55:30,042 [wrapper] Test setup, not cleaning
[2026-01-29 22:55:30] 2026-01-29 21:55:30,046 [wrapper] apfmon messages muted
[2026-01-29 22:55:30] 2026-01-29 21:55:30,050 [wrapper] ==== wrapper stdout END ====
[2026-01-29 22:55:30] 2026-01-29 21:55:30,054 [wrapper] ==== wrapper stderr END ====
[2026-01-29 22:55:30]  *** Error codes and diagnostics ***
[2026-01-29 22:55:30]     "exeErrorCode": 65,
[2026-01-29 22:55:30]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2026-01-29 22:55:30]     "pilotErrorCode": 1305,
[2026-01-29 22:55:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2026-01-29 22:55:30]  *** Listing of results directory ***
[2026-01-29 22:55:30] total 528472
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc    584422 Jan 29 07:53 pilot3.tar.gz
[2026-01-29 22:55:30] -rwx------ 1 boinc boinc     36322 Jan 29 07:55 runpilot2-wrapper.sh
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc      5111 Jan 29 07:56 queuedata.json
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc       100 Jan 29 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 22:55:30] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 22:52 run_atlas
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc       105 Jan 29 22:52 job.xml
[2026-01-29 22:55:30] -rw-r--r-- 2 boinc boinc 537020176 Jan 29 22:52 EVNT.48317909._000011.pool.root.1
[2026-01-29 22:55:30] -rw-r--r-- 2 boinc boinc    597764 Jan 29 22:52 input.tar.gz
[2026-01-29 22:55:30] -rw-r--r-- 2 boinc boinc     15845 Jan 29 22:52 start_atlas.sh
[2026-01-29 22:55:30] drwxrwx--x 2 boinc boinc      4096 Jan 29 22:52 shared
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc         0 Jan 29 22:52 boinc_setup_complete
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc      6369 Jan 29 22:52 init_data.xml
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc         0 Jan 29 22:52 boinc_lockfile
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc      2499 Jan 29 22:52 pandaJob.out
[2026-01-29 22:55:30] -rw------- 1 boinc boinc   1009660 Jan 29 22:52 agis_schedconf.cvmfs.json
[2026-01-29 22:55:30] -rw------- 1 boinc boinc   1511668 Jan 29 22:52 agis_ddmendpoints.agis.ALL.json
[2026-01-29 22:55:30] -rw------- 1 boinc boinc       427 Jan 29 22:52 workernode_map.json
[2026-01-29 22:55:30] drwx------ 5 boinc boinc      4096 Jan 29 22:52 pilot3
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc       524 Jan 29 22:53 boinc_task_state.xml
[2026-01-29 22:55:30] -rw------- 1 boinc boinc       981 Jan 29 22:53 memory_monitor_summary.json
[2026-01-29 22:55:30] -rw------- 1 boinc boinc     21695 Jan 29 22:53 log.48317911._005576.job.log.tgz.1
[2026-01-29 22:55:30] -rw------- 1 boinc boinc        95 Jan 29 22:54 pilot_heartbeat.json
[2026-01-29 22:55:30] -rw------- 1 boinc boinc      6974 Jan 29 22:55 heartbeat.json
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc        23 Jan 29 22:55 wrapper_checkpoint.txt
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc      8192 Jan 29 22:55 boinc_mmap_file
[2026-01-29 22:55:30] -rw------- 1 boinc boinc      4552 Jan 29 22:55 pilotlog.txt
[2026-01-29 22:55:30] -rw------- 1 boinc boinc     82436 Jan 29 22:55 log.48317911._005576.job.log.1
[2026-01-29 22:55:30] -rw------- 1 boinc boinc       188 Jan 29 22:55 output.list
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc       620 Jan 29 22:55 runtime_log
[2026-01-29 22:55:30] -rw------- 1 boinc boinc    122880 Jan 29 22:55 result.tar.gz
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc      8743 Jan 29 22:55 runtime_log.err
[2026-01-29 22:55:30] -rw------- 1 boinc boinc       647 Jan 29 22:55 p47MDmS7a58n9Rq4apOajLDm4fhM0noT9bVooX4SDmN6HKDmCeYOCo.diag
[2026-01-29 22:55:30] -rw-r--r-- 1 boinc boinc      9583 Jan 29 22:55 stderr.txt
[2026-01-29 22:55:30] No HITS result produced
[2026-01-29 22:55:30]  *** Contents of shared directory: ***
[2026-01-29 22:55:30] total 525160
[2026-01-29 22:55:30] -rw-r--r-- 2 boinc boinc 537020176 Jan 29 22:52 ATLAS.root_0
[2026-01-29 22:55:30] -rw-r--r-- 2 boinc boinc    597764 Jan 29 22:52 input.tar.gz
[2026-01-29 22:55:30] -rw-r--r-- 2 boinc boinc     15845 Jan 29 22:52 start_atlas.sh
[2026-01-29 22:55:30] -rw------- 1 boinc boinc    122880 Jan 29 22:55 result.tar.gz
22:55:32 (418017): run_atlas exited; CPU time 24.785409
22:55:32 (418017): called boinc_finish(0)

</stderr_txt>
]]>

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