Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:13:39 (4898): wrapper (7.7.26015): starting
06:13:39 (4898): wrapper: running run_atlas (--nthreads 12)
[2026-01-29 06:13:39] Arguments: --nthreads 12
[2026-01-29 06:13:39] Threads: 12
[2026-01-29 06:13:39] Checking for CVMFS
[2026-01-29 06:13:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 06:13:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 06:13:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 06:13:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 06:13:40] 2.11.2.0 2984 379721 95640 155633 1 49 18281462 20275201 1 130560 1 161898935 99.957 22296926 16808 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-29 06:13:40] CVMFS is ok
[2026-01-29 06:13:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 06:13:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 06:13:40] Further information can be found at the LHC@home message board.
[2026-01-29 06:13:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 06:13:40] Checking for apptainer binary...
[2026-01-29 06:13:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 06:13:40] Running /usr/bin/apptainer --version
[2026-01-29 06:13:40] apptainer version 1.3.2-1.el7
[2026-01-29 06:13:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 06:13:42] c-205-26.aglt2.org
[2026-01-29 06:13:42] apptainer works
[2026-01-29 06:13:42] Set ATHENA_PROC_NUMBER=12
[2026-01-29 06:13:42] Set ATHENA_CORE_NUMBER=12
[2026-01-29 06:13:42] Starting ATLAS job with PandaID=6990595206
[2026-01-29 06:13:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 07:31:15]  *** The last 200 lines of the pilot log: ***
[2026-01-29 07:31:15]  status_code=0
[2026-01-29 07:31:15]  storage_token=
[2026-01-29 07:31:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6990595206/log.48317872._010686.job.log.tgz.1
[2026-01-29 07:31:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/92/log.48317872._010686.job.log.tgz.1
[2026-01-29 07:31:15]  workdir=None
[2026-01-29 07:31:15] ]
[2026-01-29 07:31:15] 2026-01-29 12:30:31,824 | INFO     | transferring file log.48317872._010686.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6990595206/log.48317872._010686.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-29 07:31:15] 2026-01-29 12:30:31,824 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6990595206/log.48317872._010686.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317872._010686.job
[2026-01-29 07:31:15] 2026-01-29 12:30:31,846 | INFO     | adding to output.list: log.48317872._010686.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/92/log.48317872._010686.job.log.tg
[2026-01-29 07:31:15] 2026-01-29 12:30:31,847 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-29 07:31:15] 2026-01-29 12:30:31,847 | INFO     | summary of transferred files:
[2026-01-29 07:31:15] 2026-01-29 12:30:31,847 | INFO     |  -- lfn=log.48317872._010686.job.log.tgz.1, status_code=0, status=transferred
[2026-01-29 07:31:15] 2026-01-29 12:30:31,847 | INFO     | stage-out finished correctly
[2026-01-29 07:31:15] 2026-01-29 12:30:31,930 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-29 07:31:15] 2026-01-29 12:30:32,221 | WARNING  | process 13285 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 07:31:15] 2026-01-29 12:30:32,221 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6990595206/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 07:31:15] 2026-01-29 12:30:32,229 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6990595206/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 07:31:15] 2026-01-29 12:30:32,229 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-29 07:31:15] 2026-01-29 12:30:32,230 | WARNING  | maxPSS not found in memory monitor output
[2026-01-29 07:31:15] 2026-01-29 12:30:32,230 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4037531 B
[2026-01-29 07:31:15] 2026-01-29 12:30:32,230 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15594 B
[2026-01-29 07:31:15] 2026-01-29 12:30:32,231 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-29 07:31:15] 2026-01-29 12:30:32,248 | INFO     | sufficient remaining disk space (28791799808 B)
[2026-01-29 07:31:15] 2026-01-29 12:30:32,249 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-29 07:31:15] 2026-01-29 12:30:32,250 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6990595206: 4336673 B (within 5033164800 B limit)
[2026-01-29 07:31:15] 2026-01-29 12:30:32,250 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6990595206/HITS.48317872._010686.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-29 07:31:15] 2026-01-29 12:30:32,250 | INFO     | total size of present files: 0 B (workdir size: 4336673 B)
[2026-01-29 07:31:15] 2026-01-29 12:30:32,250 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6990595206/HITS.48317872._010686.pool.root.1 since it does not exist
[2026-01-29 07:31:15] 2026-01-29 12:30:32,341 | INFO     | number of running child processes to parent process 13285: 1
[2026-01-29 07:31:15] 2026-01-29 12:30:32,341 | INFO     | maximum number of monitored processes: 6
[2026-01-29 07:31:15] 2026-01-29 12:30:33,340 | INFO     | time since job start (4591s) is within the limit (349056.0s)
[2026-01-29 07:31:15] 2026-01-29 12:30:33,611 | INFO     | job 6990595206 has state=finished
[2026-01-29 07:31:15] 2026-01-29 12:30:33,611 | INFO     | preparing for final server update for job 6990595206 in state='finished'
[2026-01-29 07:31:15] 2026-01-29 12:30:33,611 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6990595206/jobReport.json
[2026-01-29 07:31:15] 2026-01-29 12:30:33,614 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-29 07:31:15] 2026-01-29 12:30:33,614 | INFO     | this job has now completed (state=finished)
[2026-01-29 07:31:15] 2026-01-29 12:30:33,615 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-29 07:31:15] 2026-01-29 12:30:33,615 | INFO     | log transfer has been attempted: DONE
[2026-01-29 07:31:15] 2026-01-29 12:30:33,615 | INFO     | job 6990595206 has finished - writing final server update
[2026-01-29 07:31:15] 2026-01-29 12:30:33,615 | INFO     | total number of processed events: 400 (read)
[2026-01-29 07:31:15] 2026-01-29 12:30:33,617 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6990595206/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 07:31:15] 2026-01-29 12:30:33,617 | INFO     | extracted standard info from prmon json
[2026-01-29 07:31:15] 2026-01-29 12:30:33,618 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 07:31:15] 2026-01-29 12:30:33,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 07:31:15] 2026-01-29 12:30:33,618 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 07:31:15] 2026-01-29 12:30:33,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 07:31:15] 2026-01-29 12:30:33,619 | INFO     | fitting pss+swap vs Time
[2026-01-29 07:31:15] 2026-01-29 12:30:33,620 | INFO     | sum of square deviations: 97479037.0
[2026-01-29 07:31:15] 2026-01-29 12:30:33,620 | INFO     | sum of deviations: 1028575656.0
[2026-01-29 07:31:15] 2026-01-29 12:30:33,620 | INFO     | mean x: 1769687614.5
[2026-01-29 07:31:15] 2026-01-29 12:30:33,620 | INFO     | mean y: 2678586.294117647
[2026-01-29 07:31:15] 2026-01-29 12:30:33,620 | INFO     | intersect: -18670644981.719925
[2026-01-29 07:31:15] 2026-01-29 12:30:33,621 | INFO     | chi2: 0.06850671526341334
[2026-01-29 07:31:15] 2026-01-29 12:30:33,621 | INFO     | current memory leak: 10.55 B/s (using 68 data points, chi2=0.07)
[2026-01-29 07:31:15] 2026-01-29 12:30:33,621 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-01-29 07:31:15] 2026-01-29 12:30:33,621 | INFO     | ..............................
[2026-01-29 07:31:15] 2026-01-29 12:30:33,621 | INFO     | . Timing measurements:
[2026-01-29 07:31:15] 2026-01-29 12:30:33,621 | INFO     | . get job = 0 s
[2026-01-29 07:31:15] 2026-01-29 12:30:33,621 | INFO     | . initial setup = 7 s
[2026-01-29 07:31:15] 2026-01-29 12:30:33,622 | INFO     | . payload setup = 7 s
[2026-01-29 07:31:15] 2026-01-29 12:30:33,622 | INFO     | . stage-in = 0 s
[2026-01-29 07:31:15] 2026-01-29 12:30:33,622 | INFO     | . payload execution = 4565 s
[2026-01-29 07:31:15] 2026-01-29 12:30:33,622 | INFO     | . stage-out = 0 s
[2026-01-29 07:31:15] 2026-01-29 12:30:33,622 | INFO     | . log creation = 0 s
[2026-01-29 07:31:15] 2026-01-29 12:30:33,622 | INFO     | ..............................
[2026-01-29 07:31:15] 2026-01-29 12:30:33,700 | INFO     | 
[2026-01-29 07:31:15] 2026-01-29 12:30:33,701 | INFO     | job summary report
[2026-01-29 07:31:15] 2026-01-29 12:30:33,701 | INFO     | --------------------------------------------------
[2026-01-29 07:31:15] 2026-01-29 12:30:33,701 | INFO     | PanDA job id: 6990595206
[2026-01-29 07:31:15] 2026-01-29 12:30:33,701 | INFO     | task id: 48317872
[2026-01-29 07:31:15] 2026-01-29 12:30:33,701 | INFO     | errors: (none)
[2026-01-29 07:31:15] 2026-01-29 12:30:33,701 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 07:31:15] 2026-01-29 12:30:33,702 | INFO     | pilot state: finished 
[2026-01-29 07:31:15] 2026-01-29 12:30:33,702 | INFO     | transexitcode: 0
[2026-01-29 07:31:15] 2026-01-29 12:30:33,702 | INFO     | exeerrorcode: 0
[2026-01-29 07:31:15] 2026-01-29 12:30:33,702 | INFO     | exeerrordiag: 
[2026-01-29 07:31:15] 2026-01-29 12:30:33,702 | INFO     | exitcode: 0
[2026-01-29 07:31:15] 2026-01-29 12:30:33,702 | INFO     | exitmsg: OK
[2026-01-29 07:31:15] 2026-01-29 12:30:33,702 | INFO     | cpuconsumptiontime: 49189 s
[2026-01-29 07:31:15] 2026-01-29 12:30:33,703 | INFO     | nevents: 400
[2026-01-29 07:31:15] 2026-01-29 12:30:33,703 | INFO     | neventsw: 0
[2026-01-29 07:31:15] 2026-01-29 12:30:33,703 | INFO     | pid: 13285
[2026-01-29 07:31:15] 2026-01-29 12:30:33,703 | INFO     | pgrp: 13285
[2026-01-29 07:31:15] 2026-01-29 12:30:33,703 | INFO     | corecount: 12
[2026-01-29 07:31:15] 2026-01-29 12:30:33,703 | INFO     | event service: False
[2026-01-29 07:31:15] 2026-01-29 12:30:33,704 | INFO     | sizes: {0: 2284029, 1: 2284263, 11: 2284263, 4576: 2310368, 4578: 2319422, 4580: 2319588}
[2026-01-29 07:31:15] 2026-01-29 12:30:33,704 | INFO     | --------------------------------------------------
[2026-01-29 07:31:15] 2026-01-29 12:30:33,704 | INFO     | 
[2026-01-29 07:31:15] 2026-01-29 12:30:33,704 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-29 07:31:15] 2026-01-29 12:30:33,728 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,729 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,729 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,729 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,729 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,730 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,730 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,730 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,730 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,730 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,731 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 07:31:15] 2026-01-29 12:30:33,732 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,732 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 07:31:15] 2026-01-29 12:30:33,732 | INFO     | job 6990595206 has completed (purged errors)
[2026-01-29 07:31:15] 2026-01-29 12:30:33,732 | INFO     | overall cleanup function is called
[2026-01-29 07:31:15] 2026-01-29 12:30:34,740 | INFO     | --- collectZombieJob: --- 10, [13285]
[2026-01-29 07:31:15] 2026-01-29 12:30:34,741 | INFO     | zombie collector waiting for pid 13285
[2026-01-29 07:31:15] 2026-01-29 12:30:34,741 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 07:31:15] 2026-01-29 12:30:34,741 | INFO     | collected zombie processes
[2026-01-29 07:31:15] 2026-01-29 12:30:34,741 | INFO     | will attempt to kill all subprocesses of pid=13285
[2026-01-29 07:31:15] 2026-01-29 12:30:34,827 | INFO     | process IDs to be killed: [13285] (in reverse order)
[2026-01-29 07:31:15] 2026-01-29 12:30:34,885 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 07:31:15] 2026-01-29 12:30:34,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 07:31:15] 2026-01-29 12:30:34,889 | INFO     | did not find any defunct processes belonging to 13285
[2026-01-29 07:31:15] 2026-01-29 12:30:34,893 | INFO     | did not find any defunct processes belonging to 13285
[2026-01-29 07:31:15] 2026-01-29 12:30:34,893 | INFO     | ready for new job
[2026-01-29 07:31:15] 2026-01-29 12:30:34,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 07:31:15] 2026-01-29 12:30:34,895 | INFO     | **************************************
[2026-01-29 07:31:15] 2026-01-29 12:30:34,895 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 07:31:15] 2026-01-29 12:30:34,895 | INFO     | **************************************
[2026-01-29 07:31:15] 2026-01-29 12:30:34,895 | INFO     | 
[2026-01-29 07:31:15] 2026-01-29 12:30:34,896 | INFO     | architecture information:
[2026-01-29 07:31:15] 2026-01-29 12:30:34,896 | INFO     | executing command: cat /etc/os-release
[2026-01-29 07:31:15] 2026-01-29 12:30:34,911 | INFO     | cat /etc/os-release:
[2026-01-29 07:31:15] NAME="CentOS Linux"
[2026-01-29 07:31:15] VERSION="7 (Core)"
[2026-01-29 07:31:15] ID="centos"
[2026-01-29 07:31:15] ID_LIKE="rhel fedora"
[2026-01-29 07:31:15] VERSION_ID="7"
[2026-01-29 07:31:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 07:31:15] ANSI_COLOR="0;31"
[2026-01-29 07:31:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 07:31:15] HOME_URL="https://www.centos.org/"
[2026-01-29 07:31:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 07:31:15] 
[2026-01-29 07:31:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 07:31:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 07:31:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 07:31:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 07:31:15] 
[2026-01-29 07:31:15] 2026-01-29 12:30:34,911 | INFO     | **************************************
[2026-01-29 07:31:15] 2026-01-29 12:30:35,414 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-29 07:31:15] 2026-01-29 12:30:35,431 | INFO     | sufficient remaining disk space (28795994112 B)
[2026-01-29 07:31:15] 2026-01-29 12:30:35,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 07:31:15] 2026-01-29 12:30:35,431 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 07:31:15] 2026-01-29 12:30:35,432 | INFO     | update_server=False
[2026-01-29 07:31:15] 2026-01-29 12:30:35,432 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 07:31:15] 2026-01-29 12:30:35,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 07:31:15] 2026-01-29 12:30:35,432 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 07:31:15] 2026-01-29 12:30:35,749 | INFO     | all data control threads have been joined
[2026-01-29 07:31:15] 2026-01-29 12:30:35,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 07:31:15] 2026-01-29 12:30:35,849 | INFO     | aborting loop
[2026-01-29 07:31:15] 2026-01-29 12:30:36,003 | INFO     | all payload control threads have been joined
[2026-01-29 07:31:15] 2026-01-29 12:30:36,437 | INFO     | [job] retrieve thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:36,438 | INFO     | [job] queue monitor thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:36,524 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:36,539 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:36,548 | INFO     | all job control threads have been joined
[2026-01-29 07:31:15] 2026-01-29 12:30:36,641 | INFO     | [data] copytool_in thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:36,753 | INFO     | [data] control thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:36,854 | INFO     | [job] job monitor thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:36,976 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:37,009 | INFO     | [payload] control thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:37,092 | INFO     | [payload] failed_post thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:37,438 | INFO     | [data] copytool_out thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:37,553 | INFO     | [job] control thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:37,589 | INFO     | [payload] validate_post thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:37,724 | INFO     | [job] validate thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:38,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 07:31:15] 2026-01-29 12:30:42,019 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:30:46,409 | INFO     | job.realtimelogging is not enabled
[2026-01-29 07:31:15] 2026-01-29 12:30:47,414 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 07:31:15] 2026-01-29 12:31:06,537 | INFO     | PID=8868 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-29 07:31:15] 2026-01-29 12:31:06,538 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 07:31:15] 2026-01-29 12:31:06,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 07:31:15] 2026-01-29 12:31:06,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 07:31:15] 2026-01-29 12:31:09,431 | INFO     | [monitor] cgroup control has ended
[2026-01-29 07:31:15] 2026-01-29 12:31:10,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935607109440)>', '<ExcThread(monitor, started 139935176705792)>']
[2026-01-29 07:31:15] 2026-01-29 12:31:11,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 07:31:15] 2026-01-29 12:31:11,564 | INFO     | [monitor] control thread has ended
[2026-01-29 07:31:15] 2026-01-29 12:31:15,584 | INFO     | all workflow threads have been joined
[2026-01-29 07:31:15] 2026-01-29 12:31:15,585 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 07:31:15] 2026-01-29 12:31:15,594 | INFO     | traces error code: 0
[2026-01-29 07:31:15] 2026-01-29 12:31:15,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 07:31:15] 2026-01-29 12:31:15,703 [wrapper] ==== pilot stdout END ====
[2026-01-29 07:31:15] 2026-01-29 12:31:15,707 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 07:31:15] 2026-01-29 12:31:15,710 [wrapper] pilotpid: 8868
[2026-01-29 07:31:15] 2026-01-29 12:31:15,714 [wrapper] Pilot exit status: 0
[2026-01-29 07:31:15] 2026-01-29 12:31:15,730 [wrapper] pandaids: 6990595206
[2026-01-29 07:31:15] 2026-01-29 12:31:15,770 [wrapper] cleanup supervisor_pilot  4732 8869
[2026-01-29 07:31:15] 2026-01-29 12:31:15,773 [wrapper] Test setup, not cleaning
[2026-01-29 07:31:15] 2026-01-29 12:31:15,777 [wrapper] apfmon messages muted
[2026-01-29 07:31:15] 2026-01-29 12:31:15,781 [wrapper] ==== wrapper stdout END ====
[2026-01-29 07:31:15] 2026-01-29 12:31:15,784 [wrapper] ==== wrapper stderr END ====
[2026-01-29 07:31:15]  *** Error codes and diagnostics ***
[2026-01-29 07:31:15]     "exeErrorCode": 0,
[2026-01-29 07:31:15]     "exeErrorDiag": "",
[2026-01-29 07:31:15]     "pilotErrorCode": 0,
[2026-01-29 07:31:15]     "pilotErrorDiag": "",
[2026-01-29 07:31:15]  *** Listing of results directory ***
[2026-01-29 07:31:15] total 674512
[2026-01-29 07:31:15] -rwx------ 1 boincer umatlas     36322 Jan 29 00:11 runpilot2-wrapper.sh
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas      5111 Jan 29 00:13 queuedata.json
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas    584422 Jan 29 00:13 pilot3.tar.gz
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas       100 Jan 29 06:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 07:31:15] -rwxr-xr-x 1 boincer umatlas      7986 Jan 29 06:13 run_atlas
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas       105 Jan 29 06:13 job.xml
[2026-01-29 07:31:15] -rw-r--r-- 2 boincer umatlas 497367007 Jan 29 06:13 EVNT.48317869._000197.pool.root.1
[2026-01-29 07:31:15] -rw-r--r-- 2 boincer umatlas     15845 Jan 29 06:13 start_atlas.sh
[2026-01-29 07:31:15] drwxrwx--x 2 boincer umatlas      4096 Jan 29 06:13 shared
[2026-01-29 07:31:15] -rw-r--r-- 2 boincer umatlas    597763 Jan 29 06:13 input.tar.gz
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas         0 Jan 29 06:13 boinc_lockfile
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas      2517 Jan 29 06:13 pandaJob.out
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas        57 Jan 29 06:13 setup.sh.local
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas   1006134 Jan 29 06:13 agis_schedconf.cvmfs.json
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas   1516246 Jan 29 06:13 agis_ddmendpoints.agis.ALL.json
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas       434 Jan 29 06:14 workernode_map.json
[2026-01-29 07:31:15] drwx------ 5 boincer umatlas      4096 Jan 29 06:14 pilot3
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas      5952 Jan 29 07:27 init_data.xml
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas 187290519 Jan 29 07:30 HITS.48317872._010686.pool.root.1
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas       530 Jan 29 07:30 boinc_task_state.xml
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas      1045 Jan 29 07:30 memory_monitor_summary.json
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas    379308 Jan 29 07:30 log.48317872._010686.job.log.tgz.1
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas      6407 Jan 29 07:30 heartbeat.json
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas      8192 Jan 29 07:31 boinc_mmap_file
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas        27 Jan 29 07:31 wrapper_checkpoint.txt
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas        95 Jan 29 07:31 pilot_heartbeat.json
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas      4813 Jan 29 07:31 pilotlog.txt
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas    667773 Jan 29 07:31 log.48317872._010686.job.log.1
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas       357 Jan 29 07:31 output.list
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas       620 Jan 29 07:31 runtime_log
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas   1064960 Jan 29 07:31 result.tar.gz
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas       660 Jan 29 07:31 wleKDmXUZ58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmu1HKDm5jrbTo.diag
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas      9343 Jan 29 07:31 runtime_log.err
[2026-01-29 07:31:15] -rw-r--r-- 1 boincer umatlas     22376 Jan 29 07:31 stderr.txt
[2026-01-29 07:31:15] HITS file was successfully produced:
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas 187290519 Jan 29 07:30 shared/HITS.pool.root.1
[2026-01-29 07:31:15]  *** Contents of shared directory: ***
[2026-01-29 07:31:15] total 670264
[2026-01-29 07:31:15] -rw-r--r-- 2 boincer umatlas 497367007 Jan 29 06:13 ATLAS.root_0
[2026-01-29 07:31:15] -rw-r--r-- 2 boincer umatlas     15845 Jan 29 06:13 start_atlas.sh
[2026-01-29 07:31:15] -rw-r--r-- 2 boincer umatlas    597763 Jan 29 06:13 input.tar.gz
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas 187290519 Jan 29 07:30 HITS.pool.root.1
[2026-01-29 07:31:15] -rw------- 1 boincer umatlas   1064960 Jan 29 07:31 result.tar.gz
07:31:17 (4898): run_atlas exited; CPU time 49165.827863
07:31:17 (4898): called boinc_finish(0)

</stderr_txt>
]]>

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