Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:24:31 (37962): wrapper (7.7.26015): starting
04:24:31 (37962): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 04:24:31] Arguments: --nthreads 8
[2026-01-29 04:24:31] Threads: 8
[2026-01-29 04:24:31] Checking for CVMFS
[2026-01-29 04:24:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 04:24:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 04:24:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 04:24:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 04:24:31] 2.11.2.0 27562 426044 311852 155628 2 50 9232003 18432001 2749 130560 7 747694680 99.376 1130764721 25992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-29 04:24:31] CVMFS is ok
[2026-01-29 04:24:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 04:24:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 04:24:31] Further information can be found at the LHC@home message board.
[2026-01-29 04:24:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 04:24:31] Checking for apptainer binary...
[2026-01-29 04:24:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 04:24:31] Running /usr/bin/apptainer --version
[2026-01-29 04:24:31] apptainer version 1.3.2-1.el7
[2026-01-29 04:24:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 04:24:32] c-9-30.aglt2.org
[2026-01-29 04:24:32] apptainer works
[2026-01-29 04:24:32] Set ATHENA_PROC_NUMBER=8
[2026-01-29 04:24:32] Set ATHENA_CORE_NUMBER=8
[2026-01-29 04:24:32] Starting ATLAS job with PandaID=6990490559
[2026-01-29 04:24:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 07:25:11]  *** The last 200 lines of the pilot log: ***
[2026-01-29 07:25:11] 2026-01-29 12:24:13,757 | INFO     | total number of processed events: 400 (read)
[2026-01-29 07:25:11] 2026-01-29 12:24:13,763 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6990490559/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 07:25:11] 2026-01-29 12:24:13,764 | INFO     | extracted standard info from prmon json
[2026-01-29 07:25:11] 2026-01-29 12:24:13,764 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 07:25:11] 2026-01-29 12:24:13,764 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 07:25:11] 2026-01-29 12:24:13,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 07:25:11] 2026-01-29 12:24:13,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 07:25:11] 2026-01-29 12:24:13,770 | INFO     | fitting pss+swap vs Time
[2026-01-29 07:25:11] 2026-01-29 12:24:13,770 | INFO     | sum of square deviations: 1719429448.0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,771 | INFO     | sum of deviations: -2190651641.999996
[2026-01-29 07:25:11] 2026-01-29 12:24:13,772 | INFO     | mean x: 1769684066.0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,772 | INFO     | mean y: 2476527.5762711866
[2026-01-29 07:25:11] 2026-01-29 12:24:13,772 | INFO     | intersect: 2257155432.5545983
[2026-01-29 07:25:11] 2026-01-29 12:24:13,772 | INFO     | chi2: 2.2017907532621113
[2026-01-29 07:25:11] 2026-01-29 12:24:13,773 | INFO     | sum of square deviations: 1577789583.0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,774 | INFO     | sum of deviations: 9342436669.500002
[2026-01-29 07:25:11] 2026-01-29 12:24:13,774 | INFO     | mean x: 1769683913.5
[2026-01-29 07:25:11] 2026-01-29 12:24:13,774 | INFO     | mean y: 2488657.4360465114
[2026-01-29 07:25:11] 2026-01-29 12:24:13,774 | INFO     | intersect: -10476196247.72768
[2026-01-29 07:25:11] 2026-01-29 12:24:13,775 | INFO     | chi2: 1.4321803501124524
[2026-01-29 07:25:11] 2026-01-29 12:24:13,775 | INFO     | current chi2=1.4321803501124524 (change=34.953839369587044 %)
[2026-01-29 07:25:11] 2026-01-29 12:24:13,775 | INFO     | sum of square deviations: 1444149868.0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,777 | INFO     | sum of deviations: 9006929196.999996
[2026-01-29 07:25:11] 2026-01-29 12:24:13,777 | INFO     | mean x: 1769683761.0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,777 | INFO     | mean y: 2488274.598802395
[2026-01-29 07:25:11] 2026-01-29 12:24:13,777 | INFO     | intersect: -11034743171.803728
[2026-01-29 07:25:11] 2026-01-29 12:24:13,778 | INFO     | chi2: 1.4330956282418155
[2026-01-29 07:25:11] 2026-01-29 12:24:13,778 | INFO     | current chi2=1.4330956282418155 (change=-0.06390802173003066 %)
[2026-01-29 07:25:11] 2026-01-29 12:24:13,778 | INFO     | right removable region: 166
[2026-01-29 07:25:11] 2026-01-29 12:24:13,778 | INFO     | sum of square deviations: 1577789583.0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,779 | INFO     | sum of deviations: -25566583398.0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,780 | INFO     | mean x: 1769684218.5
[2026-01-29 07:25:11] 2026-01-29 12:24:13,780 | INFO     | mean y: 2501325.976744186
[2026-01-29 07:25:11] 2026-01-29 12:24:13,780 | INFO     | intersect: 28678555248.437397
[2026-01-29 07:25:11] 2026-01-29 12:24:13,780 | INFO     | chi2: 0.9150459899053252
[2026-01-29 07:25:11] 2026-01-29 12:24:13,780 | INFO     | current chi2=0.9150459899053252 (change=58.44082874134979 %)
[2026-01-29 07:25:11] 2026-01-29 12:24:13,781 | INFO     | sum of square deviations: 1444149868.0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,782 | INFO     | sum of deviations: -23485010187.0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,782 | INFO     | mean x: 1769684371.0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,782 | INFO     | mean y: 2498888.874251497
[2026-01-29 07:25:11] 2026-01-29 12:24:13,783 | INFO     | intersect: 28781406398.1534
[2026-01-29 07:25:11] 2026-01-29 12:24:13,783 | INFO     | chi2: 0.9004413580077908
[2026-01-29 07:25:11] 2026-01-29 12:24:13,783 | INFO     | current chi2=0.9004413580077908 (change=1.5960544124176121 %)
[2026-01-29 07:25:11] 2026-01-29 12:24:13,783 | INFO     | left removable region: 20
[2026-01-29 07:25:11] 2026-01-29 12:24:13,784 | INFO     | sum of square deviations: 964976232.5
[2026-01-29 07:25:11] 2026-01-29 12:24:13,785 | INFO     | sum of deviations: -194476509.50000066
[2026-01-29 07:25:11] 2026-01-29 12:24:13,785 | INFO     | mean x: 1769684340.5
[2026-01-29 07:25:11] 2026-01-29 12:24:13,785 | INFO     | mean y: 2496285.51369863
[2026-01-29 07:25:11] 2026-01-29 12:24:13,785 | INFO     | intersect: 359149663.9763134
[2026-01-29 07:25:11] 2026-01-29 12:24:13,785 | INFO     | chi2: 0.026887961033306266
[2026-01-29 07:25:11] 2026-01-29 12:24:13,786 | INFO     | current memory leak: -0.20 B/s (using 146 data points, chi2=0.03)
[2026-01-29 07:25:11] 2026-01-29 12:24:13,786 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2026-01-29 07:25:11] 2026-01-29 12:24:13,786 | INFO     | ..............................
[2026-01-29 07:25:11] 2026-01-29 12:24:13,786 | INFO     | . Timing measurements:
[2026-01-29 07:25:11] 2026-01-29 12:24:13,787 | INFO     | . get job = 0 s
[2026-01-29 07:25:11] 2026-01-29 12:24:13,787 | INFO     | . initial setup = 5 s
[2026-01-29 07:25:11] 2026-01-29 12:24:13,787 | INFO     | . payload setup = 4 s
[2026-01-29 07:25:11] 2026-01-29 12:24:13,787 | INFO     | . stage-in = 0 s
[2026-01-29 07:25:11] 2026-01-29 12:24:13,787 | INFO     | . payload execution = 10753 s
[2026-01-29 07:25:11] 2026-01-29 12:24:13,787 | INFO     | . stage-out = 1 s
[2026-01-29 07:25:11] 2026-01-29 12:24:13,787 | INFO     | . log creation = 0 s
[2026-01-29 07:25:11] 2026-01-29 12:24:13,788 | INFO     | ..............................
[2026-01-29 07:25:11] 2026-01-29 12:24:13,862 | INFO     | 
[2026-01-29 07:25:11] 2026-01-29 12:24:13,862 | INFO     | job summary report
[2026-01-29 07:25:11] 2026-01-29 12:24:13,862 | INFO     | --------------------------------------------------
[2026-01-29 07:25:11] 2026-01-29 12:24:13,862 | INFO     | PanDA job id: 6990490559
[2026-01-29 07:25:11] 2026-01-29 12:24:13,862 | INFO     | task id: 48317971
[2026-01-29 07:25:11] 2026-01-29 12:24:13,863 | INFO     | errors: (none)
[2026-01-29 07:25:11] 2026-01-29 12:24:13,863 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 07:25:11] 2026-01-29 12:24:13,863 | INFO     | pilot state: finished 
[2026-01-29 07:25:11] 2026-01-29 12:24:13,863 | INFO     | transexitcode: 0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,863 | INFO     | exeerrorcode: 0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,863 | INFO     | exeerrordiag: 
[2026-01-29 07:25:11] 2026-01-29 12:24:13,863 | INFO     | exitcode: 0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,864 | INFO     | exitmsg: OK
[2026-01-29 07:25:11] 2026-01-29 12:24:13,864 | INFO     | cpuconsumptiontime: 80612 s
[2026-01-29 07:25:11] 2026-01-29 12:24:13,864 | INFO     | nevents: 400
[2026-01-29 07:25:11] 2026-01-29 12:24:13,864 | INFO     | neventsw: 0
[2026-01-29 07:25:11] 2026-01-29 12:24:13,864 | INFO     | pid: 46081
[2026-01-29 07:25:11] 2026-01-29 12:24:13,864 | INFO     | pgrp: 46081
[2026-01-29 07:25:11] 2026-01-29 12:24:13,865 | INFO     | corecount: 8
[2026-01-29 07:25:11] 2026-01-29 12:24:13,865 | INFO     | event service: False
[2026-01-29 07:25:11] 2026-01-29 12:24:13,865 | INFO     | sizes: {0: 2283851, 1: 2284255, 10761: 2313059, 10763: 2322113, 10765: 2322315}
[2026-01-29 07:25:11] 2026-01-29 12:24:13,865 | INFO     | --------------------------------------------------
[2026-01-29 07:25:11] 2026-01-29 12:24:13,865 | INFO     | 
[2026-01-29 07:25:11] 2026-01-29 12:24:13,865 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-29 07:25:11] 2026-01-29 12:24:13,884 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,885 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,885 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,885 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,887 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 07:25:11] 2026-01-29 12:24:13,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,888 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 07:25:11] 2026-01-29 12:24:13,888 | INFO     | job 6990490559 has completed (purged errors)
[2026-01-29 07:25:11] 2026-01-29 12:24:13,888 | INFO     | overall cleanup function is called
[2026-01-29 07:25:11] 2026-01-29 12:24:14,897 | INFO     | --- collectZombieJob: --- 10, [46081]
[2026-01-29 07:25:11] 2026-01-29 12:24:14,898 | INFO     | zombie collector waiting for pid 46081
[2026-01-29 07:25:11] 2026-01-29 12:24:14,898 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 07:25:11] 2026-01-29 12:24:14,898 | INFO     | collected zombie processes
[2026-01-29 07:25:11] 2026-01-29 12:24:14,898 | INFO     | will attempt to kill all subprocesses of pid=46081
[2026-01-29 07:25:11] 2026-01-29 12:24:15,154 | INFO     | process IDs to be killed: [46081] (in reverse order)
[2026-01-29 07:25:11] 2026-01-29 12:24:15,234 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 07:25:11] 2026-01-29 12:24:15,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 07:25:11] 2026-01-29 12:24:15,238 | INFO     | did not find any defunct processes belonging to 46081
[2026-01-29 07:25:11] 2026-01-29 12:24:15,242 | INFO     | did not find any defunct processes belonging to 46081
[2026-01-29 07:25:11] 2026-01-29 12:24:15,242 | INFO     | ready for new job
[2026-01-29 07:25:11] 2026-01-29 12:24:15,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 07:25:11] 2026-01-29 12:24:15,244 | INFO     | **************************************
[2026-01-29 07:25:11] 2026-01-29 12:24:15,244 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 07:25:11] 2026-01-29 12:24:15,244 | INFO     | **************************************
[2026-01-29 07:25:11] 2026-01-29 12:24:15,244 | INFO     | 
[2026-01-29 07:25:11] 2026-01-29 12:24:15,245 | INFO     | architecture information:
[2026-01-29 07:25:11] 2026-01-29 12:24:15,245 | INFO     | executing command: cat /etc/os-release
[2026-01-29 07:25:11] 2026-01-29 12:24:15,256 | INFO     | cat /etc/os-release:
[2026-01-29 07:25:11] NAME="CentOS Linux"
[2026-01-29 07:25:11] VERSION="7 (Core)"
[2026-01-29 07:25:11] ID="centos"
[2026-01-29 07:25:11] ID_LIKE="rhel fedora"
[2026-01-29 07:25:11] VERSION_ID="7"
[2026-01-29 07:25:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 07:25:11] ANSI_COLOR="0;31"
[2026-01-29 07:25:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 07:25:11] HOME_URL="https://www.centos.org/"
[2026-01-29 07:25:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 07:25:11] 
[2026-01-29 07:25:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 07:25:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 07:25:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 07:25:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 07:25:11] 
[2026-01-29 07:25:11] 2026-01-29 12:24:15,256 | INFO     | **************************************
[2026-01-29 07:25:11] 2026-01-29 12:24:15,758 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-29 07:25:11] 2026-01-29 12:24:15,775 | INFO     | sufficient remaining disk space (102662930432 B)
[2026-01-29 07:25:11] 2026-01-29 12:24:15,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 07:25:11] 2026-01-29 12:24:15,775 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 07:25:11] 2026-01-29 12:24:15,776 | INFO     | update_server=False
[2026-01-29 07:25:11] 2026-01-29 12:24:15,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 07:25:11] 2026-01-29 12:24:15,776 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 07:25:11] 2026-01-29 12:24:16,244 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-29 07:25:11] 2026-01-29 12:24:16,245 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-29 07:25:11] 2026-01-29 12:24:16,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 07:25:11] 2026-01-29 12:24:16,245 | INFO     | will abort loop
[2026-01-29 07:25:11] 2026-01-29 12:24:16,440 | INFO     | all data control threads have been joined
[2026-01-29 07:25:11] 2026-01-29 12:24:16,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 07:25:11] 2026-01-29 12:24:16,679 | INFO     | all payload control threads have been joined
[2026-01-29 07:25:11] 2026-01-29 12:24:16,782 | INFO     | [job] retrieve thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:16,782 | INFO     | [job] queue monitor thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:16,995 | INFO     | all job control threads have been joined
[2026-01-29 07:25:11] 2026-01-29 12:24:17,141 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:17,188 | INFO     | [payload] validate_post thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:17,224 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:17,225 | INFO     | [data] copytool_in thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:17,249 | INFO     | [job] job monitor thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:17,446 | INFO     | [data] control thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:17,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 07:25:11] 2026-01-29 12:24:17,685 | INFO     | [payload] control thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:17,689 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:17,740 | INFO     | [job] validate thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:17,933 | INFO     | [payload] failed_post thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:18,001 | INFO     | [job] control thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:18,141 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:18,477 | INFO     | [data] copytool_out thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:21,543 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 07:25:11] 2026-01-29 12:24:41,139 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-01-29 07:25:11] 2026-01-29 12:24:45,575 | INFO     | PID=41683 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 07:25:11] 2026-01-29 12:24:45,575 | INFO     | .. there are 4 such processes running
[2026-01-29 07:25:11] 2026-01-29 12:24:45,575 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 07:25:11] 2026-01-29 12:24:45,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 07:25:11] 2026-01-29 12:24:45,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 07:25:11] 2026-01-29 12:25:03,998 | INFO     | [monitor] cgroup control has ended
[2026-01-29 07:25:11] 2026-01-29 12:25:05,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594106230592)>', '<ExcThread(monitor, started 140593506268928)>']
[2026-01-29 07:25:11] 2026-01-29 12:25:06,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 07:25:11] 2026-01-29 12:25:06,681 | INFO     | [monitor] control thread has ended
[2026-01-29 07:25:11] 2026-01-29 12:25:10,734 | INFO     | all workflow threads have been joined
[2026-01-29 07:25:11] 2026-01-29 12:25:10,735 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 07:25:11] 2026-01-29 12:25:10,735 | INFO     | traces error code: 0
[2026-01-29 07:25:11] 2026-01-29 12:25:10,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 07:25:11] 2026-01-29 12:25:10,850 [wrapper] ==== pilot stdout END ====
[2026-01-29 07:25:11] 2026-01-29 12:25:10,853 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 07:25:11] 2026-01-29 12:25:10,855 [wrapper] pilotpid: 41683
[2026-01-29 07:25:11] 2026-01-29 12:25:10,857 [wrapper] Pilot exit status: 0
[2026-01-29 07:25:11] 2026-01-29 12:25:10,866 [wrapper] pandaids: 6990490559
[2026-01-29 07:25:11] 2026-01-29 12:25:10,918 [wrapper] cleanup supervisor_pilot 23288 41684
[2026-01-29 07:25:11] 2026-01-29 12:25:10,920 [wrapper] Test setup, not cleaning
[2026-01-29 07:25:11] 2026-01-29 12:25:10,922 [wrapper] apfmon messages muted
[2026-01-29 07:25:11] 2026-01-29 12:25:10,924 [wrapper] ==== wrapper stdout END ====
[2026-01-29 07:25:11] 2026-01-29 12:25:10,926 [wrapper] ==== wrapper stderr END ====
[2026-01-29 07:25:11]  *** Error codes and diagnostics ***
[2026-01-29 07:25:11]     "exeErrorCode": 0,
[2026-01-29 07:25:11]     "exeErrorDiag": "",
[2026-01-29 07:25:11]     "pilotErrorCode": 0,
[2026-01-29 07:25:11]     "pilotErrorDiag": "",
[2026-01-29 07:25:11]  *** Listing of results directory ***
[2026-01-29 07:25:11] total 723036
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas    584422 Jan 28 20:04 pilot3.tar.gz
[2026-01-29 07:25:11] -rwx------ 1 boincer umatlas     36322 Jan 28 20:06 runpilot2-wrapper.sh
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas      5111 Jan 28 20:09 queuedata.json
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas       100 Jan 29 04:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 07:25:11] -rwxr-xr-x 1 boincer umatlas      7986 Jan 29 04:24 run_atlas
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas       105 Jan 29 04:24 job.xml
[2026-01-29 07:25:11] -rw-r--r-- 2 boincer umatlas 536960425 Jan 29 04:24 EVNT.48317969._000076.pool.root.1
[2026-01-29 07:25:11] -rw-r--r-- 2 boincer umatlas     15845 Jan 29 04:24 start_atlas.sh
[2026-01-29 07:25:11] drwxrwx--x 2 boincer umatlas      4096 Jan 29 04:24 shared
[2026-01-29 07:25:11] -rw-r--r-- 2 boincer umatlas    597761 Jan 29 04:24 input.tar.gz
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas         0 Jan 29 04:24 boinc_lockfile
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas      2516 Jan 29 04:24 pandaJob.out
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas        57 Jan 29 04:24 setup.sh.local
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas   1005730 Jan 29 04:24 agis_schedconf.cvmfs.json
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas   1516246 Jan 29 04:24 agis_ddmendpoints.agis.ALL.json
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas       438 Jan 29 04:24 workernode_map.json
[2026-01-29 07:25:11] drwx------ 5 boincer umatlas      4096 Jan 29 04:24 pilot3
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas      6035 Jan 29 07:20 init_data.xml
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas 195593587 Jan 29 07:23 HITS.48317971._004183.pool.root.1
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas       531 Jan 29 07:23 boinc_task_state.xml
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas      1050 Jan 29 07:24 memory_monitor_summary.json
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas    446454 Jan 29 07:24 log.48317971._004183.job.log.tgz.1
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas      6394 Jan 29 07:24 heartbeat.json
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas      8192 Jan 29 07:24 boinc_mmap_file
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas        28 Jan 29 07:24 wrapper_checkpoint.txt
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas        95 Jan 29 07:24 pilot_heartbeat.json
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas      5004 Jan 29 07:25 pilotlog.txt
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas   1497947 Jan 29 07:25 log.48317971._004183.job.log.1
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas       357 Jan 29 07:25 output.list
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas       620 Jan 29 07:25 runtime_log
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas   1966080 Jan 29 07:25 result.tar.gz
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas       658 Jan 29 07:25 ybTNDmxfV58n9Rq4apOajLDm4fhM0noT9bVooX4SDmBaHKDmukLFZm.diag
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas      9332 Jan 29 07:25 runtime_log.err
[2026-01-29 07:25:11] -rw-r--r-- 1 boincer umatlas     20996 Jan 29 07:25 stderr.txt
[2026-01-29 07:25:11] HITS file was successfully produced:
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas 195593587 Jan 29 07:23 shared/HITS.pool.root.1
[2026-01-29 07:25:11]  *** Contents of shared directory: ***
[2026-01-29 07:25:11] total 717916
[2026-01-29 07:25:11] -rw-r--r-- 2 boincer umatlas 536960425 Jan 29 04:24 ATLAS.root_0
[2026-01-29 07:25:11] -rw-r--r-- 2 boincer umatlas     15845 Jan 29 04:24 start_atlas.sh
[2026-01-29 07:25:11] -rw-r--r-- 2 boincer umatlas    597761 Jan 29 04:24 input.tar.gz
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas 195593587 Jan 29 07:23 HITS.pool.root.1
[2026-01-29 07:25:11] -rw------- 1 boincer umatlas   1966080 Jan 29 07:25 result.tar.gz
07:25:12 (37962): run_atlas exited; CPU time 80884.878373
07:25:12 (37962): called boinc_finish(0)

</stderr_txt>
]]>

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