Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:06:05 (27737): wrapper (7.7.26015): starting
01:06:05 (27737): wrapper: running run_atlas (--nthreads 12)
[2026-01-29 01:06:05] Arguments: --nthreads 12
[2026-01-29 01:06:05] Threads: 12
[2026-01-29 01:06:05] Checking for CVMFS
[2026-01-29 01:06:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 01:06:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 01:06:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 01:06:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 01:06:05] 2.11.2.0 2914 379460 93972 155626 1 188 16922262 20275200 1 130560 1 161965997 99.949 22888002 16565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-29 01:06:05] CVMFS is ok
[2026-01-29 01:06:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 01:06:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 01:06:05] Further information can be found at the LHC@home message board.
[2026-01-29 01:06:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 01:06:05] Checking for apptainer binary...
[2026-01-29 01:06:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 01:06:05] Running /usr/bin/apptainer --version
[2026-01-29 01:06:05] apptainer version 1.3.2-1.el7
[2026-01-29 01:06:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 01:06:07] c-205-5.aglt2.org
[2026-01-29 01:06:07] apptainer works
[2026-01-29 01:06:07] Set ATHENA_PROC_NUMBER=12
[2026-01-29 01:06:07] Set ATHENA_CORE_NUMBER=12
[2026-01-29 01:06:07] Starting ATLAS job with PandaID=6990487688
[2026-01-29 01:06:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 02:24:59]  *** The last 200 lines of the pilot log: ***
[2026-01-29 02:24:59]  filetype=log
[2026-01-29 02:24:59]  guid=fd57b39e-09aa-4521-8b18-fbb9744ee015
[2026-01-29 02:24:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-29 02:24:59]  is_altstaged=None
[2026-01-29 02:24:59]  is_tar=False
[2026-01-29 02:24:59]  lfn=log.48317971._003580.job.log.tgz.1
[2026-01-29 02:24:59]  mtime=0
[2026-01-29 02:24:59]  protocol_id=None
[2026-01-29 02:24:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-29 02:24:59]  replicas=None
[2026-01-29 02:24:59]  scope=mc23_13p6TeV
[2026-01-29 02:24:59]  status=None
[2026-01-29 02:24:59]  status_code=0
[2026-01-29 02:24:59]  storage_token=
[2026-01-29 02:24:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6990487688/log.48317971._003580.job.log.tgz.1
[2026-01-29 02:24:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/43/log.48317971._003580.job.log.tgz.1
[2026-01-29 02:24:59]  workdir=None
[2026-01-29 02:24:59] ]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,222 | INFO     | transferring file log.48317971._003580.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6990487688/log.48317971._003580.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-29 02:24:59] 2026-01-29 07:24:27,222 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6990487688/log.48317971._003580.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317971._003580.job
[2026-01-29 02:24:59] 2026-01-29 07:24:27,244 | INFO     | adding to output.list: log.48317971._003580.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/43/log.48317971._003580.job.log.tg
[2026-01-29 02:24:59] 2026-01-29 07:24:27,245 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-29 02:24:59] 2026-01-29 07:24:27,245 | INFO     | summary of transferred files:
[2026-01-29 02:24:59] 2026-01-29 07:24:27,246 | INFO     |  -- lfn=log.48317971._003580.job.log.tgz.1, status_code=0, status=transferred
[2026-01-29 02:24:59] 2026-01-29 07:24:27,246 | INFO     | stage-out finished correctly
[2026-01-29 02:24:59] 2026-01-29 07:24:27,329 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-29 02:24:59] 2026-01-29 07:24:27,410 | INFO     | job 6990487688 has state=finished
[2026-01-29 02:24:59] 2026-01-29 07:24:27,410 | INFO     | preparing for final server update for job 6990487688 in state='finished'
[2026-01-29 02:24:59] 2026-01-29 07:24:27,410 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6990487688/jobReport.json
[2026-01-29 02:24:59] 2026-01-29 07:24:27,413 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-29 02:24:59] 2026-01-29 07:24:27,414 | INFO     | this job has now completed (state=finished)
[2026-01-29 02:24:59] 2026-01-29 07:24:27,414 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-29 02:24:59] 2026-01-29 07:24:27,414 | INFO     | log transfer has been attempted: DONE
[2026-01-29 02:24:59] 2026-01-29 07:24:27,414 | INFO     | job 6990487688 has finished - writing final server update
[2026-01-29 02:24:59] 2026-01-29 07:24:27,415 | INFO     | total number of processed events: 400 (read)
[2026-01-29 02:24:59] 2026-01-29 07:24:27,417 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6990487688/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 02:24:59] 2026-01-29 07:24:27,418 | INFO     | extracted standard info from prmon json
[2026-01-29 02:24:59] 2026-01-29 07:24:27,418 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 02:24:59] 2026-01-29 07:24:27,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 02:24:59] 2026-01-29 07:24:27,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 02:24:59] 2026-01-29 07:24:27,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 02:24:59] 2026-01-29 07:24:27,420 | INFO     | fitting pss+swap vs Time
[2026-01-29 02:24:59] 2026-01-29 07:24:27,421 | INFO     | sum of square deviations: 106336877.5
[2026-01-29 02:24:59] 2026-01-29 07:24:27,421 | INFO     | sum of deviations: 1402131573.5
[2026-01-29 02:24:59] 2026-01-29 07:24:27,421 | INFO     | mean x: 1769669220.5
[2026-01-29 02:24:59] 2026-01-29 07:24:27,421 | INFO     | mean y: 2970510.0714285714
[2026-01-29 02:24:59] 2026-01-29 07:24:27,421 | INFO     | intersect: -23331446928.640587
[2026-01-29 02:24:59] 2026-01-29 07:24:27,422 | INFO     | chi2: 0.002611740160502757
[2026-01-29 02:24:59] 2026-01-29 07:24:27,422 | INFO     | current memory leak: 13.19 B/s (using 70 data points, chi2=0.00)
[2026-01-29 02:24:59] 2026-01-29 07:24:27,422 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-01-29 02:24:59] 2026-01-29 07:24:27,422 | INFO     | ..............................
[2026-01-29 02:24:59] 2026-01-29 07:24:27,422 | INFO     | . Timing measurements:
[2026-01-29 02:24:59] 2026-01-29 07:24:27,423 | INFO     | . get job = 0 s
[2026-01-29 02:24:59] 2026-01-29 07:24:27,423 | INFO     | . initial setup = 7 s
[2026-01-29 02:24:59] 2026-01-29 07:24:27,423 | INFO     | . payload setup = 7 s
[2026-01-29 02:24:59] 2026-01-29 07:24:27,423 | INFO     | . stage-in = 0 s
[2026-01-29 02:24:59] 2026-01-29 07:24:27,423 | INFO     | . payload execution = 4657 s
[2026-01-29 02:24:59] 2026-01-29 07:24:27,423 | INFO     | . stage-out = 0 s
[2026-01-29 02:24:59] 2026-01-29 07:24:27,423 | INFO     | . log creation = 0 s
[2026-01-29 02:24:59] 2026-01-29 07:24:27,423 | INFO     | ..............................
[2026-01-29 02:24:59] 2026-01-29 07:24:27,500 | INFO     | 
[2026-01-29 02:24:59] 2026-01-29 07:24:27,500 | INFO     | job summary report
[2026-01-29 02:24:59] 2026-01-29 07:24:27,500 | INFO     | --------------------------------------------------
[2026-01-29 02:24:59] 2026-01-29 07:24:27,500 | INFO     | PanDA job id: 6990487688
[2026-01-29 02:24:59] 2026-01-29 07:24:27,501 | INFO     | task id: 48317971
[2026-01-29 02:24:59] 2026-01-29 07:24:27,501 | INFO     | errors: (none)
[2026-01-29 02:24:59] 2026-01-29 07:24:27,501 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 02:24:59] 2026-01-29 07:24:27,501 | INFO     | pilot state: finished 
[2026-01-29 02:24:59] 2026-01-29 07:24:27,501 | INFO     | transexitcode: 0
[2026-01-29 02:24:59] 2026-01-29 07:24:27,501 | INFO     | exeerrorcode: 0
[2026-01-29 02:24:59] 2026-01-29 07:24:27,501 | INFO     | exeerrordiag: 
[2026-01-29 02:24:59] 2026-01-29 07:24:27,502 | INFO     | exitcode: 0
[2026-01-29 02:24:59] 2026-01-29 07:24:27,502 | INFO     | exitmsg: OK
[2026-01-29 02:24:59] 2026-01-29 07:24:27,502 | INFO     | cpuconsumptiontime: 50799 s
[2026-01-29 02:24:59] 2026-01-29 07:24:27,502 | INFO     | nevents: 400
[2026-01-29 02:24:59] 2026-01-29 07:24:27,502 | INFO     | neventsw: 0
[2026-01-29 02:24:59] 2026-01-29 07:24:27,502 | INFO     | pid: 3520
[2026-01-29 02:24:59] 2026-01-29 07:24:27,503 | INFO     | pgrp: 3520
[2026-01-29 02:24:59] 2026-01-29 07:24:27,503 | INFO     | corecount: 12
[2026-01-29 02:24:59] 2026-01-29 07:24:27,503 | INFO     | event service: False
[2026-01-29 02:24:59] 2026-01-29 07:24:27,503 | INFO     | sizes: {0: 2284169, 11: 2284169, 4667: 2310318, 4668: 2319371, 4669: 2319565}
[2026-01-29 02:24:59] 2026-01-29 07:24:27,503 | INFO     | --------------------------------------------------
[2026-01-29 02:24:59] 2026-01-29 07:24:27,503 | INFO     | 
[2026-01-29 02:24:59] 2026-01-29 07:24:27,504 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-29 02:24:59] 2026-01-29 07:24:27,529 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,529 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,529 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,530 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,532 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 02:24:59] 2026-01-29 07:24:27,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,532 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 02:24:59] 2026-01-29 07:24:27,533 | INFO     | job 6990487688 has completed (purged errors)
[2026-01-29 02:24:59] 2026-01-29 07:24:27,533 | INFO     | overall cleanup function is called
[2026-01-29 02:24:59] 2026-01-29 07:24:28,540 | INFO     | --- collectZombieJob: --- 10, [3520]
[2026-01-29 02:24:59] 2026-01-29 07:24:28,541 | INFO     | zombie collector waiting for pid 3520
[2026-01-29 02:24:59] 2026-01-29 07:24:28,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 02:24:59] 2026-01-29 07:24:28,541 | INFO     | collected zombie processes
[2026-01-29 02:24:59] 2026-01-29 07:24:28,541 | INFO     | will attempt to kill all subprocesses of pid=3520
[2026-01-29 02:24:59] 2026-01-29 07:24:28,633 | INFO     | process IDs to be killed: [3520] (in reverse order)
[2026-01-29 02:24:59] 2026-01-29 07:24:28,687 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 02:24:59] 2026-01-29 07:24:28,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 02:24:59] 2026-01-29 07:24:28,691 | INFO     | did not find any defunct processes belonging to 3520
[2026-01-29 02:24:59] 2026-01-29 07:24:28,695 | INFO     | did not find any defunct processes belonging to 3520
[2026-01-29 02:24:59] 2026-01-29 07:24:28,695 | INFO     | ready for new job
[2026-01-29 02:24:59] 2026-01-29 07:24:28,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 02:24:59] 2026-01-29 07:24:28,698 | INFO     | **************************************
[2026-01-29 02:24:59] 2026-01-29 07:24:28,698 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 02:24:59] 2026-01-29 07:24:28,698 | INFO     | **************************************
[2026-01-29 02:24:59] 2026-01-29 07:24:28,698 | INFO     | 
[2026-01-29 02:24:59] 2026-01-29 07:24:28,699 | INFO     | architecture information:
[2026-01-29 02:24:59] 2026-01-29 07:24:28,699 | INFO     | executing command: cat /etc/os-release
[2026-01-29 02:24:59] 2026-01-29 07:24:28,714 | INFO     | cat /etc/os-release:
[2026-01-29 02:24:59] NAME="CentOS Linux"
[2026-01-29 02:24:59] VERSION="7 (Core)"
[2026-01-29 02:24:59] ID="centos"
[2026-01-29 02:24:59] ID_LIKE="rhel fedora"
[2026-01-29 02:24:59] VERSION_ID="7"
[2026-01-29 02:24:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 02:24:59] ANSI_COLOR="0;31"
[2026-01-29 02:24:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 02:24:59] HOME_URL="https://www.centos.org/"
[2026-01-29 02:24:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 02:24:59] 
[2026-01-29 02:24:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 02:24:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 02:24:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 02:24:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 02:24:59] 
[2026-01-29 02:24:59] 2026-01-29 07:24:28,715 | INFO     | **************************************
[2026-01-29 02:24:59] 2026-01-29 07:24:29,218 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-29 02:24:59] 2026-01-29 07:24:29,235 | INFO     | sufficient remaining disk space (28705816576 B)
[2026-01-29 02:24:59] 2026-01-29 07:24:29,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 02:24:59] 2026-01-29 07:24:29,236 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 02:24:59] 2026-01-29 07:24:29,236 | INFO     | update_server=False
[2026-01-29 02:24:59] 2026-01-29 07:24:29,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 02:24:59] 2026-01-29 07:24:29,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 02:24:59] 2026-01-29 07:24:29,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 02:24:59] 2026-01-29 07:24:29,590 | INFO     | all job control threads have been joined
[2026-01-29 02:24:59] 2026-01-29 07:24:29,794 | INFO     | all payload control threads have been joined
[2026-01-29 02:24:59] 2026-01-29 07:24:29,876 | INFO     | all data control threads have been joined
[2026-01-29 02:24:59] 2026-01-29 07:24:30,242 | INFO     | [job] retrieve thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:30,242 | INFO     | [job] queue monitor thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:30,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 02:24:59] 2026-01-29 07:24:30,416 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:30,595 | INFO     | [job] control thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:30,691 | INFO     | [payload] validate_post thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:30,708 | INFO     | [data] copytool_in thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:30,799 | INFO     | [payload] control thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:30,878 | INFO     | [data] control thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:30,954 | INFO     | [job] validate thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:31,477 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:31,627 | INFO     | [payload] failed_post thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:31,682 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:31,925 | WARNING  | process 3520 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 02:24:59] 2026-01-29 07:24:31,996 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 02:24:59] 2026-01-29 07:24:32,080 | INFO     | number of running child processes to parent process 3520: 1
[2026-01-29 02:24:59] 2026-01-29 07:24:32,080 | INFO     | maximum number of monitored processes: 6
[2026-01-29 02:24:59] 2026-01-29 07:24:32,080 | INFO     | aborting job monitoring since job object (job id=6990487688) has expired
[2026-01-29 02:24:59] 2026-01-29 07:24:32,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 02:24:59] 2026-01-29 07:24:32,081 | INFO     | will abort loop
[2026-01-29 02:24:59] 2026-01-29 07:24:32,339 | INFO     | [data] copytool_out thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:33,086 | INFO     | [job] job monitor thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:33,243 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:34,270 | INFO     | [monitor] cgroup control has ended
[2026-01-29 02:24:59] 2026-01-29 07:24:40,124 | INFO     | job.realtimelogging is not enabled
[2026-01-29 02:24:59] 2026-01-29 07:24:41,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 02:24:59] 2026-01-29 07:24:41,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691576497984)>', '<ExcThread(monitor, started 140691267098368)>']
[2026-01-29 02:24:59] 2026-01-29 07:24:46,797 | INFO     | all workflow threads have been joined
[2026-01-29 02:24:59] 2026-01-29 07:24:46,797 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 02:24:59] 2026-01-29 07:24:46,798 | INFO     | traces error code: 0
[2026-01-29 02:24:59] 2026-01-29 07:24:46,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 02:24:59] 2026-01-29 07:24:58,944 | INFO     | PID=31417 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 02:24:59] 2026-01-29 07:24:58,944 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 02:24:59] 2026-01-29 07:24:58,944 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 02:24:59] 2026-01-29 07:24:58,944 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 02:24:59] 2026-01-29 07:24:58,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 02:24:59] 2026-01-29 07:24:58,945 | INFO     | [monitor] control thread has ended
[2026-01-29 02:24:59] 2026-01-29 07:24:59,028 [wrapper] ==== pilot stdout END ====
[2026-01-29 02:24:59] 2026-01-29 07:24:59,032 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 02:24:59] 2026-01-29 07:24:59,036 [wrapper] pilotpid: 31417
[2026-01-29 02:24:59] 2026-01-29 07:24:59,039 [wrapper] Pilot exit status: 0
[2026-01-29 02:24:59] 2026-01-29 07:24:59,054 [wrapper] pandaids: 6990487688
[2026-01-29 02:24:59] 2026-01-29 07:24:59,095 [wrapper] cleanup supervisor_pilot 25573 31418
[2026-01-29 02:24:59] 2026-01-29 07:24:59,099 [wrapper] Test setup, not cleaning
[2026-01-29 02:24:59] 2026-01-29 07:24:59,103 [wrapper] apfmon messages muted
[2026-01-29 02:24:59] 2026-01-29 07:24:59,107 [wrapper] ==== wrapper stdout END ====
[2026-01-29 02:24:59] 2026-01-29 07:24:59,110 [wrapper] ==== wrapper stderr END ====
[2026-01-29 02:24:59]  *** Error codes and diagnostics ***
[2026-01-29 02:24:59]     "exeErrorCode": 0,
[2026-01-29 02:24:59]     "exeErrorDiag": "",
[2026-01-29 02:24:59]     "pilotErrorCode": 0,
[2026-01-29 02:24:59]     "pilotErrorDiag": "",
[2026-01-29 02:24:59]  *** Listing of results directory ***
[2026-01-29 02:24:59] total 722476
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas    584422 Jan 28 20:04 pilot3.tar.gz
[2026-01-29 02:24:59] -rwx------ 1 boincer umatlas     36322 Jan 28 20:04 runpilot2-wrapper.sh
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas      5111 Jan 28 20:05 queuedata.json
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas       100 Jan 29 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 02:24:59] -rwxr-xr-x 1 boincer umatlas      7986 Jan 29 01:06 run_atlas
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas       105 Jan 29 01:06 job.xml
[2026-01-29 02:24:59] -rw-r--r-- 2 boincer umatlas 537893940 Jan 29 01:06 EVNT.48317969._000017.pool.root.1
[2026-01-29 02:24:59] -rw-r--r-- 2 boincer umatlas     15845 Jan 29 01:06 start_atlas.sh
[2026-01-29 02:24:59] drwxrwx--x 2 boincer umatlas      4096 Jan 29 01:06 shared
[2026-01-29 02:24:59] -rw-r--r-- 2 boincer umatlas    597763 Jan 29 01:06 input.tar.gz
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas         0 Jan 29 01:06 boinc_lockfile
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas      2512 Jan 29 01:06 pandaJob.out
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas        57 Jan 29 01:06 setup.sh.local
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas   1005755 Jan 29 01:06 agis_schedconf.cvmfs.json
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas   1516246 Jan 29 01:06 agis_ddmendpoints.agis.ALL.json
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas       433 Jan 29 01:06 workernode_map.json
[2026-01-29 02:24:59] drwx------ 5 boincer umatlas      4096 Jan 29 01:06 pilot3
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas      5951 Jan 29 02:21 init_data.xml
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas 195828402 Jan 29 02:23 HITS.48317971._003580.pool.root.1
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas       531 Jan 29 02:23 boinc_task_state.xml
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas      1040 Jan 29 02:24 memory_monitor_summary.json
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas        95 Jan 29 02:24 pilot_heartbeat.json
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas    393766 Jan 29 02:24 log.48317971._003580.job.log.tgz.1
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas      6400 Jan 29 02:24 heartbeat.json
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas        27 Jan 29 02:24 wrapper_checkpoint.txt
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas      8192 Jan 29 02:24 boinc_mmap_file
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas       745 Jan 29 02:24 pilotlog.txt
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas    679358 Jan 29 02:24 log.48317971._003580.job.log.1
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas       357 Jan 29 02:24 output.list
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas       620 Jan 29 02:24 runtime_log
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas   1095680 Jan 29 02:24 result.tar.gz
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas      9338 Jan 29 02:24 runtime_log.err
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas       655 Jan 29 02:24 caFKDmqdV58n9Rq4apOajLDm4fhM0noT9bVooX4SDmtSHKDmkS0Ehm.diag
[2026-01-29 02:24:59] -rw-r--r-- 1 boincer umatlas     21249 Jan 29 02:24 stderr.txt
[2026-01-29 02:24:59] HITS file was successfully produced:
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas 195828402 Jan 29 02:23 shared/HITS.pool.root.1
[2026-01-29 02:24:59]  *** Contents of shared directory: ***
[2026-01-29 02:24:59] total 718208
[2026-01-29 02:24:59] -rw-r--r-- 2 boincer umatlas 537893940 Jan 29 01:06 ATLAS.root_0
[2026-01-29 02:24:59] -rw-r--r-- 2 boincer umatlas     15845 Jan 29 01:06 start_atlas.sh
[2026-01-29 02:24:59] -rw-r--r-- 2 boincer umatlas    597763 Jan 29 01:06 input.tar.gz
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas 195828402 Jan 29 02:23 HITS.pool.root.1
[2026-01-29 02:24:59] -rw------- 1 boincer umatlas   1095680 Jan 29 02:24 result.tar.gz
02:25:00 (27737): run_atlas exited; CPU time 50782.492304
02:25:00 (27737): called boinc_finish(0)

</stderr_txt>
]]>

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