Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:58 (531754): wrapper (7.7.26015): starting
00:04:58 (531754): wrapper: running run_atlas (--nthreads 8)
[2026-01-31 00:04:59] Arguments: --nthreads 8
[2026-01-31 00:04:59] Threads: 8
[2026-01-31 00:04:59] Checking for CVMFS
[2026-01-31 00:04:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 00:05:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 00:05:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 00:05:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 00:05:01] 2.13.3.0 6596 102940 339152 155702 3 142 17709533 32935937 10316 16776704 0 472355028 99.689 361258446 32827 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-31 00:05:01] CVMFS is ok
[2026-01-31 00:05:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 00:05:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 00:05:01] Further information can be found at the LHC@home message board.
[2026-01-31 00:05:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 00:05:01] Checking for apptainer binary...
[2026-01-31 00:05:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 00:05:01] Running /usr/bin/apptainer --version
[2026-01-31 00:05:01] apptainer version 1.4.5-2.el9
[2026-01-31 00:05:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 00:05:02] c-6-7.aglt2.org
[2026-01-31 00:05:02] apptainer works
[2026-01-31 00:05:02] Set ATHENA_PROC_NUMBER=8
[2026-01-31 00:05:02] Set ATHENA_CORE_NUMBER=8
[2026-01-31 00:05:02] Starting ATLAS job with PandaID=6986148652
[2026-01-31 00:05:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:27:35 (618621): wrapper (7.7.26015): starting
00:27:35 (618621): wrapper: running run_atlas (--nthreads 8)
[2026-01-31 00:27:35] Arguments: --nthreads 8
[2026-01-31 00:27:35] Threads: 8
[2026-01-31 00:27:35] This job has been restarted, cleaning up previous attempt
[2026-01-31 00:27:35] Checking for CVMFS
[2026-01-31 00:27:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 00:27:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 00:27:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 00:27:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 00:27:36] 2.13.3.0 6596 102962 339756 155703 1 118 19024848 32935937 8216 16776704 0 472505710 99.688 361716787 32829 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-31 00:27:36] CVMFS is ok
[2026-01-31 00:27:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 00:27:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 00:27:36] Further information can be found at the LHC@home message board.
[2026-01-31 00:27:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 00:27:36] Checking for apptainer binary...
[2026-01-31 00:27:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 00:27:36] Running /usr/bin/apptainer --version
[2026-01-31 00:27:36] apptainer version 1.4.5-2.el9
[2026-01-31 00:27:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 00:27:36] c-6-7.aglt2.org
[2026-01-31 00:27:36] apptainer works
[2026-01-31 00:27:36] Set ATHENA_PROC_NUMBER=8
[2026-01-31 00:27:36] Set ATHENA_CORE_NUMBER=8
[2026-01-31 00:27:36] Starting ATLAS job with PandaID=6986148652
[2026-01-31 00:27:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 15:19:38]  *** The last 200 lines of the pilot log: ***
[2026-01-31 15:19:38] 2026-01-31 20:18:33,921 | INFO     | log transfer has been attempted: DONE
[2026-01-31 15:19:38] 2026-01-31 20:18:33,921 | INFO     | job 6986148652 has finished - writing final server update
[2026-01-31 15:19:38] 2026-01-31 20:18:33,922 | INFO     | total number of processed events: 400 (read)
[2026-01-31 15:19:38] 2026-01-31 20:18:33,937 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6986148652/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 15:19:38] 2026-01-31 20:18:33,938 | INFO     | extracted standard info from prmon json
[2026-01-31 15:19:38] 2026-01-31 20:18:33,938 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 15:19:38] 2026-01-31 20:18:33,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 15:19:38] 2026-01-31 20:18:33,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 15:19:38] 2026-01-31 20:18:33,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 15:19:38] 2026-01-31 20:18:33,954 | INFO     | fitting pss+swap vs Time
[2026-01-31 15:19:38] 2026-01-31 20:18:33,956 | INFO     | sum of square deviations: 208434428035.35507
[2026-01-31 15:19:38] 2026-01-31 20:18:33,977 | INFO     | sum of deviations: 307603010372.8424
[2026-01-31 15:19:38] 2026-01-31 20:18:33,977 | INFO     | mean x: 1769863982.2180364
[2026-01-31 15:19:38] 2026-01-31 20:18:33,977 | INFO     | mean y: 2533672.0479452056
[2026-01-31 15:19:38] 2026-01-31 20:18:33,977 | INFO     | intersect: -2609393225.116999
[2026-01-31 15:19:38] 2026-01-31 20:18:33,979 | INFO     | chi2: 2.2206205988455996
[2026-01-31 15:19:38] 2026-01-31 20:18:33,980 | INFO     | sum of square deviations: 204885697522.76233
[2026-01-31 15:19:38] 2026-01-31 20:18:34,006 | INFO     | sum of deviations: 360597030985.34125
[2026-01-31 15:19:38] 2026-01-31 20:18:34,006 | INFO     | mean x: 1769863829.7221584
[2026-01-31 15:19:38] 2026-01-31 20:18:34,006 | INFO     | mean y: 2535938.137772675
[2026-01-31 15:19:38] 2026-01-31 20:18:34,006 | INFO     | intersect: -3112408882.1333084
[2026-01-31 15:19:38] 2026-01-31 20:18:34,008 | INFO     | chi2: 1.5311240974022586
[2026-01-31 15:19:38] 2026-01-31 20:18:34,008 | INFO     | current chi2=1.5311240974022586 (change=31.04972104652992 %)
[2026-01-31 15:19:38] 2026-01-31 20:18:34,009 | INFO     | sum of square deviations: 201377426389.0911
[2026-01-31 15:19:38] 2026-01-31 20:18:34,030 | INFO     | sum of deviations: 356327260881.0694
[2026-01-31 15:19:38] 2026-01-31 20:18:34,030 | INFO     | mean x: 1769863677.2251732
[2026-01-31 15:19:38] 2026-01-31 20:18:34,030 | INFO     | mean y: 2535752.5381062357
[2026-01-31 15:19:38] 2026-01-31 20:18:34,031 | INFO     | intersect: -3129149300.4828434
[2026-01-31 15:19:38] 2026-01-31 20:18:34,032 | INFO     | chi2: 1.5311627070677598
[2026-01-31 15:19:38] 2026-01-31 20:18:34,032 | INFO     | current chi2=1.5311627070677598 (change=-0.0025216548787053263 %)
[2026-01-31 15:19:38] 2026-01-31 20:18:34,032 | INFO     | right removable region: 865
[2026-01-31 15:19:38] 2026-01-31 20:18:34,034 | INFO     | sum of square deviations: 204885313832.76248
[2026-01-31 15:19:38] 2026-01-31 20:18:34,086 | INFO     | sum of deviations: 164957973056.94702
[2026-01-31 15:19:38] 2026-01-31 20:18:34,087 | INFO     | mean x: 1769864134.7221584
[2026-01-31 15:19:38] 2026-01-31 20:18:34,087 | INFO     | mean y: 2539787.0493685417
[2026-01-31 15:19:38] 2026-01-31 20:18:34,087 | INFO     | intersect: -1422419351.2530541
[2026-01-31 15:19:38] 2026-01-31 20:18:34,088 | INFO     | chi2: 0.8049499830764781
[2026-01-31 15:19:38] 2026-01-31 20:18:34,088 | INFO     | current chi2=0.8049499830764781 (change=63.75112509111484 %)
[2026-01-31 15:19:38] 2026-01-31 20:18:34,089 | INFO     | sum of square deviations: 201376924541.43185
[2026-01-31 15:19:38] 2026-01-31 20:18:34,141 | INFO     | sum of deviations: 160630359592.81055
[2026-01-31 15:19:38] 2026-01-31 20:18:34,142 | INFO     | mean x: 1769864287.221709
[2026-01-31 15:19:38] 2026-01-31 20:18:34,142 | INFO     | mean y: 2539973.5739030023
[2026-01-31 15:19:38] 2026-01-31 20:18:34,142 | INFO     | intersect: -1409210342.5771663
[2026-01-31 15:19:38] 2026-01-31 20:18:34,148 | INFO     | chi2: 0.7950511952507736
[2026-01-31 15:19:38] 2026-01-31 20:18:34,148 | INFO     | current chi2=0.7950511952507736 (change=1.2297394911261266 %)
[2026-01-31 15:19:38] 2026-01-31 20:18:34,148 | INFO     | left removable region: 20
[2026-01-31 15:19:38] 2026-01-31 20:18:34,150 | INFO     | sum of square deviations: 187079566526.52783
[2026-01-31 15:19:38] 2026-01-31 20:18:34,211 | INFO     | sum of deviations: 226406835991.1622
[2026-01-31 15:19:38] 2026-01-31 20:18:34,212 | INFO     | mean x: 1769864256.7195265
[2026-01-31 15:19:38] 2026-01-31 20:18:34,212 | INFO     | mean y: 2541366.7053254438
[2026-01-31 15:19:38] 2026-01-31 20:18:34,212 | INFO     | intersect: -2139378106.049587
[2026-01-31 15:19:38] 2026-01-31 20:18:34,213 | INFO     | chi2: 0.08755719244544653
[2026-01-31 15:19:38] 2026-01-31 20:18:34,213 | INFO     | current memory leak: 1.21 B/s (using 845 data points, chi2=0.09)
[2026-01-31 15:19:38] 2026-01-31 20:18:34,216 | INFO     | could have reported an average CPU frequency of 2600 MHz (33 samples)
[2026-01-31 15:19:38] 2026-01-31 20:18:34,216 | INFO     | ..............................
[2026-01-31 15:19:38] 2026-01-31 20:18:34,216 | INFO     | . Timing measurements:
[2026-01-31 15:19:38] 2026-01-31 20:18:34,216 | INFO     | . get job = 0 s
[2026-01-31 15:19:38] 2026-01-31 20:18:34,216 | INFO     | . initial setup = 1 s
[2026-01-31 15:19:38] 2026-01-31 20:18:34,217 | INFO     | . payload setup = 6 s
[2026-01-31 15:19:38] 2026-01-31 20:18:34,217 | INFO     | . stage-in = 0 s
[2026-01-31 15:19:38] 2026-01-31 20:18:34,217 | INFO     | . payload execution = 53413 s
[2026-01-31 15:19:38] 2026-01-31 20:18:34,217 | INFO     | . stage-out = 5 s
[2026-01-31 15:19:38] 2026-01-31 20:18:34,217 | INFO     | . log creation = 0 s
[2026-01-31 15:19:38] 2026-01-31 20:18:34,217 | INFO     | ..............................
[2026-01-31 15:19:38] 2026-01-31 20:18:34,668 | INFO     | time since job start (53445s) is within the limit (349056.0s)
[2026-01-31 15:19:38] 2026-01-31 20:18:34,755 | INFO     | 
[2026-01-31 15:19:38] 2026-01-31 20:18:34,755 | INFO     | job summary report
[2026-01-31 15:19:38] 2026-01-31 20:18:34,755 | INFO     | --------------------------------------------------
[2026-01-31 15:19:38] 2026-01-31 20:18:34,755 | INFO     | PanDA job id: 6986148652
[2026-01-31 15:19:38] 2026-01-31 20:18:34,755 | INFO     | task id: 48317931
[2026-01-31 15:19:38] 2026-01-31 20:18:34,756 | INFO     | errors: (none)
[2026-01-31 15:19:38] 2026-01-31 20:18:34,756 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 15:19:38] 2026-01-31 20:18:34,756 | INFO     | pilot state: finished 
[2026-01-31 15:19:38] 2026-01-31 20:18:34,756 | INFO     | transexitcode: 0
[2026-01-31 15:19:38] 2026-01-31 20:18:34,756 | INFO     | exeerrorcode: 0
[2026-01-31 15:19:38] 2026-01-31 20:18:34,756 | INFO     | exeerrordiag: 
[2026-01-31 15:19:38] 2026-01-31 20:18:34,756 | INFO     | exitcode: 0
[2026-01-31 15:19:38] 2026-01-31 20:18:34,756 | INFO     | exitmsg: OK
[2026-01-31 15:19:38] 2026-01-31 20:18:34,756 | INFO     | cpuconsumptiontime: 49436 s
[2026-01-31 15:19:38] 2026-01-31 20:18:34,756 | INFO     | nevents: 400
[2026-01-31 15:19:38] 2026-01-31 20:18:34,774 | INFO     | neventsw: 0
[2026-01-31 15:19:38] 2026-01-31 20:18:34,780 | INFO     | pid: 646983
[2026-01-31 15:19:38] 2026-01-31 20:18:34,780 | INFO     | pgrp: 646983
[2026-01-31 15:19:38] 2026-01-31 20:18:34,780 | INFO     | corecount: 8
[2026-01-31 15:19:38] 2026-01-31 20:18:34,780 | INFO     | event service: False
[2026-01-31 15:19:38] 2026-01-31 20:18:34,780 | INFO     | sizes: {0: 2277772, 1: 2278233, 12: 2278233, 53423: 2326353, 53424: 2326352, 53430: 2335406, 53432: 2335590, 53434: 2335848}
[2026-01-31 15:19:38] 2026-01-31 20:18:34,780 | INFO     | --------------------------------------------------
[2026-01-31 15:19:38] 2026-01-31 20:18:34,780 | INFO     | 
[2026-01-31 15:19:38] 2026-01-31 20:18:34,780 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-31 15:19:38] 2026-01-31 20:18:34,900 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,900 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,900 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,900 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,910 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 15:19:38] 2026-01-31 20:18:34,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,911 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 15:19:38] 2026-01-31 20:18:34,911 | INFO     | job 6986148652 has completed (purged errors)
[2026-01-31 15:19:38] 2026-01-31 20:18:34,911 | INFO     | overall cleanup function is called
[2026-01-31 15:19:38] 2026-01-31 20:18:35,959 | INFO     | --- collectZombieJob: --- 10, [646983]
[2026-01-31 15:19:38] 2026-01-31 20:18:35,959 | INFO     | zombie collector waiting for pid 646983
[2026-01-31 15:19:38] 2026-01-31 20:18:35,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 15:19:38] 2026-01-31 20:18:35,963 | INFO     | collected zombie processes
[2026-01-31 15:19:38] 2026-01-31 20:18:35,963 | INFO     | will attempt to kill all subprocesses of pid=646983
[2026-01-31 15:19:38] 2026-01-31 20:18:36,877 | INFO     | process IDs to be killed: [646983] (in reverse order)
[2026-01-31 15:19:38] 2026-01-31 20:18:37,145 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 15:19:38] 2026-01-31 20:18:37,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 15:19:38] 2026-01-31 20:18:37,225 | INFO     | did not find any defunct processes belonging to 646983
[2026-01-31 15:19:38] 2026-01-31 20:18:37,312 | INFO     | did not find any defunct processes belonging to 646983
[2026-01-31 15:19:38] 2026-01-31 20:18:37,312 | INFO     | ready for new job
[2026-01-31 15:19:38] 2026-01-31 20:18:37,312 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 15:19:38] 2026-01-31 20:18:37,332 | INFO     | **************************************
[2026-01-31 15:19:38] 2026-01-31 20:18:37,339 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 15:19:38] 2026-01-31 20:18:37,339 | INFO     | **************************************
[2026-01-31 15:19:38] 2026-01-31 20:18:37,339 | INFO     | 
[2026-01-31 15:19:38] 2026-01-31 20:18:37,347 | INFO     | architecture information:
[2026-01-31 15:19:38] 2026-01-31 20:18:37,359 | INFO     | executing command: cat /etc/os-release
[2026-01-31 15:19:38] 2026-01-31 20:18:37,528 | INFO     | cat /etc/os-release:
[2026-01-31 15:19:38] NAME="CentOS Linux"
[2026-01-31 15:19:38] VERSION="7 (Core)"
[2026-01-31 15:19:38] ID="centos"
[2026-01-31 15:19:38] ID_LIKE="rhel fedora"
[2026-01-31 15:19:38] VERSION_ID="7"
[2026-01-31 15:19:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 15:19:38] ANSI_COLOR="0;31"
[2026-01-31 15:19:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 15:19:38] HOME_URL="https://www.centos.org/"
[2026-01-31 15:19:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 15:19:38] 
[2026-01-31 15:19:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 15:19:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 15:19:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 15:19:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 15:19:38] 
[2026-01-31 15:19:38] 2026-01-31 20:18:37,529 | INFO     | **************************************
[2026-01-31 15:19:38] 2026-01-31 20:18:38,033 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-31 15:19:38] 2026-01-31 20:18:38,121 | INFO     | sufficient remaining disk space (72498544640 B)
[2026-01-31 15:19:38] 2026-01-31 20:18:38,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 15:19:38] 2026-01-31 20:18:38,121 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 15:19:38] 2026-01-31 20:18:38,121 | INFO     | update_server=False
[2026-01-31 15:19:38] 2026-01-31 20:18:38,121 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 15:19:38] 2026-01-31 20:18:38,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 15:19:38] 2026-01-31 20:18:38,317 | INFO     | aborting loop
[2026-01-31 15:19:38] 2026-01-31 20:18:38,760 | INFO     | all job control threads have been joined
[2026-01-31 15:19:38] 2026-01-31 20:18:39,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 15:19:38] 2026-01-31 20:18:39,128 | INFO     | [job] retrieve thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:39,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 15:19:38] 2026-01-31 20:18:39,152 | INFO     | [job] validate thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:39,156 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:39,172 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:39,226 | INFO     | all data control threads have been joined
[2026-01-31 15:19:38] 2026-01-31 20:18:39,322 | INFO     | [job] job monitor thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:39,375 | INFO     | all payload control threads have been joined
[2026-01-31 15:19:38] 2026-01-31 20:18:39,430 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:39,437 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:39,766 | INFO     | [job] control thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:39,774 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 15:19:38] 2026-01-31 20:18:39,871 | INFO     | [payload] validate_post thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:39,937 | INFO     | [payload] failed_post thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:40,109 | INFO     | [data] copytool_in thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:40,265 | INFO     | [data] control thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:40,381 | INFO     | [payload] control thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:40,779 | INFO     | [job] queue monitor thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:41,157 | INFO     | [data] copytool_out thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:18:43,122 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 15:19:38] 2026-01-31 20:19:08,399 | INFO     | PID=633226 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-31 15:19:38] 2026-01-31 20:19:08,399 | INFO     | .. there are 27 such processes running
[2026-01-31 15:19:38] 2026-01-31 20:19:08,399 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 15:19:38] 2026-01-31 20:19:08,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 15:19:38] 2026-01-31 20:19:08,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 15:19:38] 2026-01-31 20:19:31,026 | INFO     | [monitor] cgroup control has ended
[2026-01-31 15:19:38] 2026-01-31 20:19:31,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986984273728)>', '<ExcThread(monitor, started 139986238158592)>']
[2026-01-31 15:19:38] 2026-01-31 20:19:31,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 15:19:38] 2026-01-31 20:19:31,553 | INFO     | [monitor] control thread has ended
[2026-01-31 15:19:38] 2026-01-31 20:19:36,319 | INFO     | all workflow threads have been joined
[2026-01-31 15:19:38] 2026-01-31 20:19:36,319 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 15:19:38] 2026-01-31 20:19:36,319 | INFO     | traces error code: 0
[2026-01-31 15:19:38] 2026-01-31 20:19:36,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 15:19:38] 2026-01-31 20:19:37,017 [wrapper] ==== pilot stdout END ====
[2026-01-31 15:19:38] 2026-01-31 20:19:37,021 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 15:19:38] 2026-01-31 20:19:37,024 [wrapper] pilotpid: 633226
[2026-01-31 15:19:38] 2026-01-31 20:19:37,030 [wrapper] Pilot exit status: 0
[2026-01-31 15:19:38] 2026-01-31 20:19:37,068 [wrapper] pandaids: 6986148652 6986148652
[2026-01-31 15:19:38] 2026-01-31 20:19:37,221 [wrapper] cleanup supervisor_pilot 3439332 633227
[2026-01-31 15:19:38] 2026-01-31 20:19:37,224 [wrapper] Test setup, not cleaning
[2026-01-31 15:19:38] 2026-01-31 20:19:37,278 [wrapper] apfmon messages muted
[2026-01-31 15:19:38] 2026-01-31 20:19:37,313 [wrapper] ==== wrapper stdout END ====
[2026-01-31 15:19:38] 2026-01-31 20:19:37,369 [wrapper] ==== wrapper stderr END ====
[2026-01-31 15:19:38]  *** Error codes and diagnostics ***
[2026-01-31 15:19:38]     "exeErrorCode": 0,
[2026-01-31 15:19:38]     "exeErrorDiag": "",
[2026-01-31 15:19:38]     "pilotErrorCode": 0,
[2026-01-31 15:19:38]     "pilotErrorDiag": "",
[2026-01-31 15:19:38]  *** Listing of results directory ***
[2026-01-31 15:19:38] total 1162992
[2026-01-31 15:19:38] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-31 15:19:38] -rwx------. 1 boincer umatlas     36322 Jan 28 12:06 runpilot2-wrapper.sh
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas      5111 Jan 28 12:08 queuedata.json
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas    584422 Jan 28 12:08 pilot3.tar.gz
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas       100 Jan 31 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 15:19:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 31 00:04 run_atlas
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas       105 Jan 31 00:04 job.xml
[2026-01-31 15:19:38] -rw-r--r--. 3 boincer umatlas 495442740 Jan 31 00:04 EVNT.48317929._000031.pool.root.1
[2026-01-31 15:19:38] -rw-r--r--. 3 boincer umatlas 495442740 Jan 31 00:04 ATLAS.root_0
[2026-01-31 15:19:38] -rw-r--r--. 2 boincer umatlas     15845 Jan 31 00:04 start_atlas.sh
[2026-01-31 15:19:38] drwxrwx--x. 2 boincer umatlas      4096 Jan 31 00:04 shared
[2026-01-31 15:19:38] -rw-r--r--. 2 boincer umatlas    597751 Jan 31 00:04 input.tar.gz
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas         0 Jan 31 00:04 boinc_lockfile
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas      2507 Jan 31 00:27 pandaJob.out
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas        57 Jan 31 00:27 setup.sh.local
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas   1010528 Jan 31 00:27 agis_schedconf.cvmfs.json
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas       432 Jan 31 00:27 workernode_map.json
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas      6656 Jan 31 15:13 init_data.xml
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas 181515380 Jan 31 15:17 HITS.48317931._004348.pool.root.1
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas       531 Jan 31 15:17 boinc_task_state.xml
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas      1049 Jan 31 15:18 memory_monitor_summary.json
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas   1511668 Jan 31 15:18 agis_ddmendpoints.agis.ALL.json
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas    926522 Jan 31 15:18 log.48317931._004348.job.log.tgz.1
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas      6384 Jan 31 15:18 heartbeat.json
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas        96 Jan 31 15:18 pilot_heartbeat.json
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas      8192 Jan 31 15:19 boinc_mmap_file
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas        28 Jan 31 15:19 wrapper_checkpoint.txt
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas      4819 Jan 31 15:19 pilotlog.txt
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas   6351233 Jan 31 15:19 log.48317931._004348.job.log.1
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas       357 Jan 31 15:19 output.list
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas       620 Jan 31 15:19 runtime_log
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas   7290880 Jan 31 15:19 result.tar.gz
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas       782 Jan 31 15:19 uqDLDm7AO58n9Rq4apOajLDm4fhM0noT9bVooX4SDmfdGKDmGQjPTo.diag
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas      9412 Jan 31 15:19 runtime_log.err
[2026-01-31 15:19:38] -rw-r--r--. 1 boincer umatlas     23309 Jan 31 15:19 stderr.txt
[2026-01-31 15:19:38] HITS file was successfully produced:
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas 181515380 Jan 31 15:17 shared/HITS.pool.root.1
[2026-01-31 15:19:38]  *** Contents of shared directory: ***
[2026-01-31 15:19:38] total 668824
[2026-01-31 15:19:38] -rw-r--r--. 3 boincer umatlas 495442740 Jan 31 00:04 ATLAS.root_0
[2026-01-31 15:19:38] -rw-r--r--. 2 boincer umatlas     15845 Jan 31 00:04 start_atlas.sh
[2026-01-31 15:19:38] -rw-r--r--. 2 boincer umatlas    597751 Jan 31 00:04 input.tar.gz
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas 181515380 Jan 31 15:17 HITS.pool.root.1
[2026-01-31 15:19:38] -rw-------. 1 boincer umatlas   7290880 Jan 31 15:19 result.tar.gz
15:19:39 (618621): run_atlas exited; CPU time 51621.055495
15:19:39 (618621): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN