Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:04:11 (27204): wrapper (7.7.26015): starting
14:04:11 (27204): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 14:04:11] Arguments: --nthreads 8
[2026-01-29 14:04:11] Threads: 8
[2026-01-29 14:04:11] Checking for CVMFS
[2026-01-29 14:04:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 14:04:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 14:04:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 14:04:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 14:04:16] 2.11.2.0 13652 64238 131656 155641 1 94 20319465 25165824 937 130560 0 25647283 99.816 17452132 3075 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-29 14:04:16] CVMFS is ok
[2026-01-29 14:04:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 14:04:16] Checking for apptainer binary...
[2026-01-29 14:04:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 14:04:16] Running /usr/bin/apptainer --version
[2026-01-29 14:04:17] apptainer version 1.3.2-1.el7
[2026-01-29 14:04:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 14:04:31] cg-vwn453.simple-grid.lan
[2026-01-29 14:04:31] apptainer works
[2026-01-29 14:04:31] Set ATHENA_PROC_NUMBER=8
[2026-01-29 14:04:31] Set ATHENA_CORE_NUMBER=8
[2026-01-29 14:04:31] Starting ATLAS job with PandaID=6986090363
[2026-01-29 14:04:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 18:10:30]  *** The last 200 lines of the pilot log: ***
[2026-01-29 18:10:30] 2026-01-29 17:09:32,642 | INFO     | total number of processed events: 400 (read)
[2026-01-29 18:10:30] 2026-01-29 17:09:32,644 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6986090363/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 18:10:30] 2026-01-29 17:09:32,645 | INFO     | extracted standard info from prmon json
[2026-01-29 18:10:30] 2026-01-29 17:09:32,645 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 18:10:30] 2026-01-29 17:09:32,645 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 18:10:30] 2026-01-29 17:09:32,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 18:10:30] 2026-01-29 17:09:32,645 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 18:10:30] 2026-01-29 17:09:32,652 | INFO     | fitting pss+swap vs Time
[2026-01-29 18:10:30] 2026-01-29 17:09:32,652 | INFO     | sum of square deviations: 3772712597.5
[2026-01-29 18:10:30] 2026-01-29 17:09:32,657 | INFO     | sum of deviations: 68085401350.499985
[2026-01-29 18:10:30] 2026-01-29 17:09:32,658 | INFO     | mean x: 1769699544.5
[2026-01-29 18:10:30] 2026-01-29 17:09:32,658 | INFO     | mean y: 2460369.1173913046
[2026-01-29 18:10:30] 2026-01-29 17:09:32,658 | INFO     | intersect: -31934958833.4275
[2026-01-29 18:10:30] 2026-01-29 17:09:32,658 | INFO     | chi2: 8.54374445249863
[2026-01-29 18:10:30] 2026-01-29 17:09:32,659 | INFO     | sum of square deviations: 3531973200.0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,661 | INFO     | sum of deviations: 82027442614.0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,661 | INFO     | mean x: 1769699392.0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,661 | INFO     | mean y: 2469030.808888889
[2026-01-29 18:10:30] 2026-01-29 17:09:32,661 | INFO     | intersect: -41097479100.53896
[2026-01-29 18:10:30] 2026-01-29 17:09:32,661 | INFO     | chi2: 7.8606195392091855
[2026-01-29 18:10:30] 2026-01-29 17:09:32,661 | INFO     | current chi2=7.8606195392091855 (change=7.995615003321692 %)
[2026-01-29 18:10:30] 2026-01-29 17:09:32,662 | INFO     | right removable region: 224
[2026-01-29 18:10:30] 2026-01-29 17:09:32,662 | INFO     | sum of square deviations: 3531973200.0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,671 | INFO     | sum of deviations: -12812954657.000004
[2026-01-29 18:10:30] 2026-01-29 17:09:32,671 | INFO     | mean x: 1769699697.0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,671 | INFO     | mean y: 2511583.36
[2026-01-29 18:10:30] 2026-01-29 17:09:32,671 | INFO     | intersect: 6422458930.120062
[2026-01-29 18:10:30] 2026-01-29 17:09:32,672 | INFO     | chi2: 3.42573395061425
[2026-01-29 18:10:30] 2026-01-29 17:09:32,672 | INFO     | current chi2=3.42573395061425 (change=59.90360000043788 %)
[2026-01-29 18:10:30] 2026-01-29 17:09:32,672 | INFO     | sum of square deviations: 3301699115.0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,674 | INFO     | sum of deviations: -67604179731.500015
[2026-01-29 18:10:30] 2026-01-29 17:09:32,674 | INFO     | mean x: 1769699849.5
[2026-01-29 18:10:30] 2026-01-29 17:09:32,674 | INFO     | mean y: 2547759.15
[2026-01-29 18:10:30] 2026-01-29 17:09:32,674 | INFO     | intersect: 36238165400.0405
[2026-01-29 18:10:30] 2026-01-29 17:09:32,675 | INFO     | chi2: 1.0769179292428606
[2026-01-29 18:10:30] 2026-01-29 17:09:32,675 | INFO     | current chi2=1.0769179292428606 (change=68.5638772663661 %)
[2026-01-29 18:10:30] 2026-01-29 17:09:32,675 | INFO     | sum of square deviations: 3081657780.0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,677 | INFO     | sum of deviations: -71874877602.0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,677 | INFO     | mean x: 1769700002.0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,677 | INFO     | mean y: 2550648.2558139535
[2026-01-29 18:10:30] 2026-01-29 17:09:32,677 | INFO     | intersect: 41278052380.31678
[2026-01-29 18:10:30] 2026-01-29 17:09:32,678 | INFO     | chi2: 0.9917779131453841
[2026-01-29 18:10:30] 2026-01-29 17:09:32,678 | INFO     | current chi2=0.9917779131453841 (change=7.905896427718974 %)
[2026-01-29 18:10:30] 2026-01-29 17:09:32,678 | INFO     | left removable region: 30
[2026-01-29 18:10:30] 2026-01-29 17:09:32,679 | INFO     | sum of square deviations: 2263977332.5
[2026-01-29 18:10:30] 2026-01-29 17:09:32,680 | INFO     | sum of deviations: -36802572460.0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,680 | INFO     | mean x: 1769700276.5
[2026-01-29 18:10:30] 2026-01-29 17:09:32,680 | INFO     | mean y: 2547097.6391752576
[2026-01-29 18:10:30] 2026-01-29 17:09:32,680 | INFO     | intersect: 28770292129.10286
[2026-01-29 18:10:30] 2026-01-29 17:09:32,681 | INFO     | chi2: 0.18074035386206985
[2026-01-29 18:10:30] 2026-01-29 17:09:32,681 | INFO     | current memory leak: -16.26 B/s (using 194 data points, chi2=0.18)
[2026-01-29 18:10:30] 2026-01-29 17:09:32,681 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-01-29 18:10:30] 2026-01-29 17:09:32,682 | INFO     | ..............................
[2026-01-29 18:10:30] 2026-01-29 17:09:32,682 | INFO     | . Timing measurements:
[2026-01-29 18:10:30] 2026-01-29 17:09:32,682 | INFO     | . get job = 0 s
[2026-01-29 18:10:30] 2026-01-29 17:09:32,682 | INFO     | . initial setup = 128 s
[2026-01-29 18:10:30] 2026-01-29 17:09:32,682 | INFO     | . payload setup = 149 s
[2026-01-29 18:10:30] 2026-01-29 17:09:32,682 | INFO     | . stage-in = 0 s
[2026-01-29 18:10:30] 2026-01-29 17:09:32,682 | INFO     | . payload execution = 14146 s
[2026-01-29 18:10:30] 2026-01-29 17:09:32,682 | INFO     | . stage-out = 5 s
[2026-01-29 18:10:30] 2026-01-29 17:09:32,682 | INFO     | . log creation = 1 s
[2026-01-29 18:10:30] 2026-01-29 17:09:32,682 | INFO     | ..............................
[2026-01-29 18:10:30] 2026-01-29 17:09:32,826 | INFO     | 
[2026-01-29 18:10:30] 2026-01-29 17:09:32,826 | INFO     | job summary report
[2026-01-29 18:10:30] 2026-01-29 17:09:32,827 | INFO     | --------------------------------------------------
[2026-01-29 18:10:30] 2026-01-29 17:09:32,827 | INFO     | PanDA job id: 6986090363
[2026-01-29 18:10:30] 2026-01-29 17:09:32,827 | INFO     | task id: 48310620
[2026-01-29 18:10:30] 2026-01-29 17:09:32,827 | INFO     | errors: (none)
[2026-01-29 18:10:30] 2026-01-29 17:09:32,827 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 18:10:30] 2026-01-29 17:09:32,827 | INFO     | pilot state: finished 
[2026-01-29 18:10:30] 2026-01-29 17:09:32,827 | INFO     | transexitcode: 0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,827 | INFO     | exeerrorcode: 0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,827 | INFO     | exeerrordiag: 
[2026-01-29 18:10:30] 2026-01-29 17:09:32,827 | INFO     | exitcode: 0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,828 | INFO     | exitmsg: OK
[2026-01-29 18:10:30] 2026-01-29 17:09:32,828 | INFO     | cpuconsumptiontime: 51091 s
[2026-01-29 18:10:30] 2026-01-29 17:09:32,828 | INFO     | nevents: 400
[2026-01-29 18:10:30] 2026-01-29 17:09:32,828 | INFO     | neventsw: 0
[2026-01-29 18:10:30] 2026-01-29 17:09:32,828 | INFO     | pid: 3340
[2026-01-29 18:10:30] 2026-01-29 17:09:32,828 | INFO     | pgrp: 3340
[2026-01-29 18:10:30] 2026-01-29 17:09:32,828 | INFO     | corecount: 8
[2026-01-29 18:10:30] 2026-01-29 17:09:32,828 | INFO     | event service: False
[2026-01-29 18:10:30] 2026-01-29 17:09:32,828 | INFO     | sizes: {0: 2283088, 1: 2284147, 2: 2284235, 12: 2284235, 14299: 2314985, 14304: 2324880, 14305: 2325258}
[2026-01-29 18:10:30] 2026-01-29 17:09:32,828 | INFO     | --------------------------------------------------
[2026-01-29 18:10:30] 2026-01-29 17:09:32,828 | INFO     | 
[2026-01-29 18:10:30] 2026-01-29 17:09:32,829 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-01-29 18:10:30] 2026-01-29 17:09:33,388 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,389 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,389 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,389 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,389 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,390 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,390 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,391 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 18:10:30] 2026-01-29 17:09:33,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,391 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 18:10:30] 2026-01-29 17:09:33,391 | INFO     | job 6986090363 has completed (purged errors)
[2026-01-29 18:10:30] 2026-01-29 17:09:33,391 | INFO     | overall cleanup function is called
[2026-01-29 18:10:30] 2026-01-29 17:09:33,466 | INFO     | PID=31278 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 18:10:30] 2026-01-29 17:09:33,466 | INFO     | .. there are 2 such processes running
[2026-01-29 18:10:30] 2026-01-29 17:09:34,406 | INFO     | --- collectZombieJob: --- 10, [3340]
[2026-01-29 18:10:30] 2026-01-29 17:09:34,406 | INFO     | zombie collector waiting for pid 3340
[2026-01-29 18:10:30] 2026-01-29 17:09:34,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 18:10:30] 2026-01-29 17:09:34,406 | INFO     | collected zombie processes
[2026-01-29 18:10:30] 2026-01-29 17:09:34,407 | INFO     | will attempt to kill all subprocesses of pid=3340
[2026-01-29 18:10:30] 2026-01-29 17:09:34,502 | INFO     | process IDs to be killed: [3340] (in reverse order)
[2026-01-29 18:10:30] 2026-01-29 17:09:35,508 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 18:10:30] 2026-01-29 17:09:35,509 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 18:10:30] 2026-01-29 17:09:35,511 | INFO     | did not find any defunct processes belonging to 3340
[2026-01-29 18:10:30] 2026-01-29 17:09:35,512 | INFO     | did not find any defunct processes belonging to 3340
[2026-01-29 18:10:30] 2026-01-29 17:09:35,513 | INFO     | ready for new job
[2026-01-29 18:10:30] 2026-01-29 17:09:35,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 18:10:30] 2026-01-29 17:09:35,515 | INFO     | **************************************
[2026-01-29 18:10:30] 2026-01-29 17:09:35,515 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 18:10:30] 2026-01-29 17:09:35,515 | INFO     | **************************************
[2026-01-29 18:10:30] 2026-01-29 17:09:35,515 | INFO     | 
[2026-01-29 18:10:30] 2026-01-29 17:09:35,516 | INFO     | pilot is running in a VM
[2026-01-29 18:10:30] 2026-01-29 17:09:35,516 | INFO     | architecture information:
[2026-01-29 18:10:30] 2026-01-29 17:09:35,522 | INFO     | executing command: cat /etc/os-release
[2026-01-29 18:10:30] 2026-01-29 17:09:35,911 | INFO     | cat /etc/os-release:
[2026-01-29 18:10:30] NAME="CentOS Linux"
[2026-01-29 18:10:30] VERSION="7 (Core)"
[2026-01-29 18:10:30] ID="centos"
[2026-01-29 18:10:30] ID_LIKE="rhel fedora"
[2026-01-29 18:10:30] VERSION_ID="7"
[2026-01-29 18:10:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 18:10:30] ANSI_COLOR="0;31"
[2026-01-29 18:10:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 18:10:30] HOME_URL="https://www.centos.org/"
[2026-01-29 18:10:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 18:10:30] 
[2026-01-29 18:10:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 18:10:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 18:10:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 18:10:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 18:10:30] 
[2026-01-29 18:10:30] 2026-01-29 17:09:35,912 | INFO     | **************************************
[2026-01-29 18:10:30] 2026-01-29 17:09:36,415 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-01-29 18:10:30] 2026-01-29 17:09:36,564 | INFO     | sufficient remaining disk space (495248736256 B)
[2026-01-29 18:10:30] 2026-01-29 17:09:36,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 18:10:30] 2026-01-29 17:09:36,564 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 18:10:30] 2026-01-29 17:09:36,565 | INFO     | update_server=False
[2026-01-29 18:10:30] 2026-01-29 17:09:36,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 18:10:30] 2026-01-29 17:09:36,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 18:10:30] 2026-01-29 17:09:36,567 | INFO     | aborting loop
[2026-01-29 18:10:30] 2026-01-29 17:09:37,071 | INFO     | all data control threads have been joined
[2026-01-29 18:10:30] 2026-01-29 17:09:37,571 | INFO     | [job] retrieve thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:37,573 | INFO     | [job] job monitor thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:37,587 | INFO     | [payload] validate_post thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:37,625 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:37,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 18:10:30] 2026-01-29 17:09:37,755 | INFO     | [payload] failed_post thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:37,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 18:10:30] 2026-01-29 17:09:37,951 | INFO     | [data] copytool_in thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:37,974 | INFO     | all job control threads have been joined
[2026-01-29 18:10:30] 2026-01-29 17:09:37,998 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:38,064 | INFO     | all payload control threads have been joined
[2026-01-29 18:10:30] 2026-01-29 17:09:38,077 | INFO     | [data] control thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:38,453 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:38,583 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:38,608 | INFO     | [job] validate thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:38,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 18:10:30] 2026-01-29 17:09:38,847 | INFO     | [job] queue monitor thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:38,980 | INFO     | [job] control thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:39,070 | INFO     | [payload] control thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:39,753 | INFO     | [data] copytool_out thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:09:42,658 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 18:10:30] 2026-01-29 17:10:05,602 | INFO     | PID=31278 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 18:10:30] 2026-01-29 17:10:05,603 | INFO     | .. there are 2 such processes running
[2026-01-29 18:10:30] 2026-01-29 17:10:05,603 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 18:10:30] 2026-01-29 17:10:05,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 18:10:30] 2026-01-29 17:10:05,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 18:10:30] 2026-01-29 17:10:19,665 | INFO     | [monitor] cgroup control has ended
[2026-01-29 18:10:30] 2026-01-29 17:10:20,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139688674146112)>', '<ExcThread(monitor, started 139688056690432)>']
[2026-01-29 18:10:30] 2026-01-29 17:10:20,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 18:10:30] 2026-01-29 17:10:20,694 | INFO     | [monitor] control thread has ended
[2026-01-29 18:10:30] 2026-01-29 17:10:25,034 | INFO     | all workflow threads have been joined
[2026-01-29 18:10:30] 2026-01-29 17:10:25,034 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 18:10:30] 2026-01-29 17:10:25,034 | INFO     | traces error code: 0
[2026-01-29 18:10:30] 2026-01-29 17:10:25,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 18:10:30] 2026-01-29 17:10:25,425 [wrapper] ==== pilot stdout END ====
[2026-01-29 18:10:30] 2026-01-29 17:10:25,524 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 18:10:30] 2026-01-29 17:10:25,629 [wrapper] pilotpid: 31278
[2026-01-29 18:10:30] 2026-01-29 17:10:25,721 [wrapper] Pilot exit status: 0
[2026-01-29 18:10:30] 2026-01-29 17:10:26,226 [wrapper] pandaids: 6986090363
[2026-01-29 18:10:30] 2026-01-29 17:10:27,090 [wrapper] cleanup supervisor_pilot  9961 31279
[2026-01-29 18:10:30] 2026-01-29 17:10:27,184 [wrapper] Test setup, not cleaning
[2026-01-29 18:10:30] 2026-01-29 17:10:27,280 [wrapper] apfmon messages muted
[2026-01-29 18:10:30] 2026-01-29 17:10:27,341 [wrapper] ==== wrapper stdout END ====
[2026-01-29 18:10:30] 2026-01-29 17:10:27,444 [wrapper] ==== wrapper stderr END ====
[2026-01-29 18:10:30]  *** Error codes and diagnostics ***
[2026-01-29 18:10:30]     "exeErrorCode": 0,
[2026-01-29 18:10:30]     "exeErrorDiag": "",
[2026-01-29 18:10:30]     "pilotErrorCode": 0,
[2026-01-29 18:10:30]     "pilotErrorDiag": "",
[2026-01-29 18:10:30]  *** Listing of results directory ***
[2026-01-29 18:10:30] total 721144
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc      5111 Jan 28 16:24 queuedata.json
[2026-01-29 18:10:30] -rwx------. 1 boinc boinc     36322 Jan 28 16:24 runpilot2-wrapper.sh
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc    584422 Jan 28 16:24 pilot3.tar.gz
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc       100 Jan 29 14:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 18:10:30] -rwxr-xr-x. 1 boinc boinc      7986 Jan 29 14:04 run_atlas
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc       105 Jan 29 14:04 job.xml
[2026-01-29 18:10:30] -rw-r--r--. 2 boinc boinc 533862774 Jan 29 14:04 EVNT.48310618._000019.pool.root.1
[2026-01-29 18:10:30] -rw-r--r--. 2 boinc boinc     15845 Jan 29 14:04 start_atlas.sh
[2026-01-29 18:10:30] drwxrwx--x. 2 boinc boinc        68 Jan 29 14:04 shared
[2026-01-29 18:10:30] -rw-r--r--. 2 boinc boinc    597743 Jan 29 14:04 input.tar.gz
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc      6392 Jan 29 14:04 init_data.xml
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc         0 Jan 29 14:04 boinc_lockfile
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc      2520 Jan 29 14:04 pandaJob.out
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc       413 Jan 29 14:10 workernode_map.json
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc   1010005 Jan 29 14:10 agis_schedconf.cvmfs.json
[2026-01-29 18:10:30] drwx------. 5 boinc boinc      4096 Jan 29 14:10 pilot3
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc 195664735 Jan 29 18:07 HITS.48310620._000753.pool.root.1
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc       531 Jan 29 18:08 boinc_task_state.xml
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc      1012 Jan 29 18:09 memory_monitor_summary.json
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc   1511668 Jan 29 18:09 agis_ddmendpoints.agis.ALL.json
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc    486302 Jan 29 18:09 log.48310620._000753.job.log.tgz.1
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc      6317 Jan 29 18:09 heartbeat.json
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc        95 Jan 29 18:10 pilot_heartbeat.json
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc        28 Jan 29 18:10 wrapper_checkpoint.txt
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc      8192 Jan 29 18:10 boinc_mmap_file
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc      4881 Jan 29 18:10 pilotlog.txt
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc   2014450 Jan 29 18:10 log.48310620._000753.job.log.1
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc       357 Jan 29 18:10 output.list
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc       620 Jan 29 18:10 runtime_log
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc   2519040 Jan 29 18:10 result.tar.gz
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc       656 Jan 29 18:10 YklLDm0ZM58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvMGKDmE2ysMm.diag
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc      8832 Jan 29 18:10 runtime_log.err
[2026-01-29 18:10:30] -rw-r--r--. 1 boinc boinc     20768 Jan 29 18:10 stderr.txt
[2026-01-29 18:10:30] HITS file was successfully produced:
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc 195664735 Jan 29 18:07 shared/HITS.pool.root.1
[2026-01-29 18:10:30]  *** Contents of shared directory: ***
[2026-01-29 18:10:30] total 715492
[2026-01-29 18:10:30] -rw-r--r--. 2 boinc boinc 533862774 Jan 29 14:04 ATLAS.root_0
[2026-01-29 18:10:30] -rw-r--r--. 2 boinc boinc     15845 Jan 29 14:04 start_atlas.sh
[2026-01-29 18:10:30] -rw-r--r--. 2 boinc boinc    597743 Jan 29 14:04 input.tar.gz
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc 195664735 Jan 29 18:07 HITS.pool.root.1
[2026-01-29 18:10:30] -rw-------. 1 boinc boinc   2519040 Jan 29 18:10 result.tar.gz
18:10:31 (27204): run_atlas exited; CPU time 51239.967733
18:10:31 (27204): called boinc_finish(0)

</stderr_txt>
]]>

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