Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:45:28 (28351): wrapper (7.7.26015): starting
17:45:28 (28351): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 17:45:28] Arguments: --nthreads 8
[2026-01-29 17:45:28] Threads: 8
[2026-01-29 17:45:28] Checking for CVMFS
[2026-01-29 17:45:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 17:45:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 17:45:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 17:45:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 17:45:29] 2.11.2.0 24514 64473 142616 155647 2 117 22860750 25165825 503 130560 0 26207762 99.824 18555864 3428 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-29 17:45:29] CVMFS is ok
[2026-01-29 17:45:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 17:45:29] Checking for apptainer binary...
[2026-01-29 17:45:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 17:45:29] Running /usr/bin/apptainer --version
[2026-01-29 17:45:29] apptainer version 1.3.2-1.el7
[2026-01-29 17:45:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 17:45:31] cg-vwn473.simple-grid.lan
[2026-01-29 17:45:31] apptainer works
[2026-01-29 17:45:31] Set ATHENA_PROC_NUMBER=8
[2026-01-29 17:45:31] Set ATHENA_CORE_NUMBER=8
[2026-01-29 17:45:31] Starting ATLAS job with PandaID=6986090188
[2026-01-29 17:45:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 21:17:30]  *** The last 200 lines of the pilot log: ***
[2026-01-29 21:17:30] 2026-01-29 20:16:28,065 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6986090188/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 21:17:30] 2026-01-29 20:16:28,065 | INFO     | extracted standard info from prmon json
[2026-01-29 21:17:30] 2026-01-29 20:16:28,065 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 21:17:30] 2026-01-29 20:16:28,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 21:17:30] 2026-01-29 20:16:28,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 21:17:30] 2026-01-29 20:16:28,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 21:17:30] 2026-01-29 20:16:28,070 | INFO     | fitting pss+swap vs Time
[2026-01-29 21:17:30] 2026-01-29 20:16:28,070 | INFO     | sum of square deviations: 2750295288.0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,072 | INFO     | sum of deviations: -13997157844.0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,072 | INFO     | mean x: 1769711470.0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,072 | INFO     | mean y: 2505355.884057971
[2026-01-29 21:17:30] 2026-01-29 20:16:28,072 | INFO     | intersect: 9009149439.523731
[2026-01-29 21:17:30] 2026-01-29 20:16:28,072 | INFO     | chi2: 2.4089106671361127
[2026-01-29 21:17:30] 2026-01-29 20:16:28,073 | INFO     | sum of square deviations: 2555770710.5
[2026-01-29 21:17:30] 2026-01-29 20:16:28,074 | INFO     | sum of deviations: -51981607.49999434
[2026-01-29 21:17:30] 2026-01-29 20:16:28,074 | INFO     | mean x: 1769711317.5
[2026-01-29 21:17:30] 2026-01-29 20:16:28,074 | INFO     | mean y: 2516078.292079208
[2026-01-29 21:17:30] 2026-01-29 20:16:28,074 | INFO     | intersect: 38510089.30278754
[2026-01-29 21:17:30] 2026-01-29 20:16:28,075 | INFO     | chi2: 1.6463293020059038
[2026-01-29 21:17:30] 2026-01-29 20:16:28,075 | INFO     | current chi2=1.6463293020059038 (change=31.656689288391952 %)
[2026-01-29 21:17:30] 2026-01-29 20:16:28,075 | INFO     | sum of square deviations: 2370641658.0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,076 | INFO     | sum of deviations: -153966684.00000528
[2026-01-29 21:17:30] 2026-01-29 20:16:28,076 | INFO     | mean x: 1769711165.0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,076 | INFO     | mean y: 2515994.269035533
[2026-01-29 21:17:30] 2026-01-29 20:16:28,077 | INFO     | intersect: 117453888.31697528
[2026-01-29 21:17:30] 2026-01-29 20:16:28,077 | INFO     | chi2: 1.6460963613619815
[2026-01-29 21:17:30] 2026-01-29 20:16:28,077 | INFO     | current chi2=1.6460963613619815 (change=0.014149091778813754 %)
[2026-01-29 21:17:30] 2026-01-29 20:16:28,077 | INFO     | right removable region: 196
[2026-01-29 21:17:30] 2026-01-29 20:16:28,077 | INFO     | sum of square deviations: 2555770710.5
[2026-01-29 21:17:30] 2026-01-29 20:16:28,079 | INFO     | sum of deviations: -44726543372.5
[2026-01-29 21:17:30] 2026-01-29 20:16:28,079 | INFO     | mean x: 1769711622.5
[2026-01-29 21:17:30] 2026-01-29 20:16:28,079 | INFO     | mean y: 2529166.589108911
[2026-01-29 21:17:30] 2026-01-29 20:16:28,079 | INFO     | intersect: 30972867513.208015
[2026-01-29 21:17:30] 2026-01-29 20:16:28,079 | INFO     | chi2: 0.9657065780331681
[2026-01-29 21:17:30] 2026-01-29 20:16:28,080 | INFO     | current chi2=0.9657065780331681 (change=59.9110672218796 %)
[2026-01-29 21:17:30] 2026-01-29 20:16:28,080 | INFO     | sum of square deviations: 2370641658.0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,081 | INFO     | sum of deviations: -42374791676.00001
[2026-01-29 21:17:30] 2026-01-29 20:16:28,081 | INFO     | mean x: 1769711775.0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,082 | INFO     | mean y: 2527180.8984771576
[2026-01-29 21:17:30] 2026-01-29 20:16:28,082 | INFO     | intersect: 31635805681.3091
[2026-01-29 21:17:30] 2026-01-29 20:16:28,082 | INFO     | chi2: 0.9492281089161259
[2026-01-29 21:17:30] 2026-01-29 20:16:28,082 | INFO     | current chi2=0.9492281089161259 (change=1.7063639714045973 %)
[2026-01-29 21:17:30] 2026-01-29 20:16:28,082 | INFO     | left removable region: 20
[2026-01-29 21:17:30] 2026-01-29 20:16:28,083 | INFO     | sum of square deviations: 1690450300.0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,084 | INFO     | sum of deviations: -13960656176.000002
[2026-01-29 21:17:30] 2026-01-29 20:16:28,084 | INFO     | mean x: 1769711744.5
[2026-01-29 21:17:30] 2026-01-29 20:16:28,084 | INFO     | mean y: 2525837.8636363638
[2026-01-29 21:17:30] 2026-01-29 20:16:28,084 | INFO     | intersect: 14617766046.69655
[2026-01-29 21:17:30] 2026-01-29 20:16:28,085 | INFO     | chi2: 0.1081988549594166
[2026-01-29 21:17:30] 2026-01-29 20:16:28,085 | INFO     | current memory leak: -8.26 B/s (using 176 data points, chi2=0.11)
[2026-01-29 21:17:30] 2026-01-29 20:16:28,085 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2026-01-29 21:17:30] 2026-01-29 20:16:28,086 | INFO     | ..............................
[2026-01-29 21:17:30] 2026-01-29 20:16:28,086 | INFO     | . Timing measurements:
[2026-01-29 21:17:30] 2026-01-29 20:16:28,086 | INFO     | . get job = 0 s
[2026-01-29 21:17:30] 2026-01-29 20:16:28,086 | INFO     | . initial setup = 7 s
[2026-01-29 21:17:30] 2026-01-29 20:16:28,086 | INFO     | . payload setup = 8 s
[2026-01-29 21:17:30] 2026-01-29 20:16:28,086 | INFO     | . stage-in = 0 s
[2026-01-29 21:17:30] 2026-01-29 20:16:28,086 | INFO     | . payload execution = 12599 s
[2026-01-29 21:17:30] 2026-01-29 20:16:28,086 | INFO     | . stage-out = 6 s
[2026-01-29 21:17:30] 2026-01-29 20:16:28,086 | INFO     | . log creation = 1 s
[2026-01-29 21:17:30] 2026-01-29 20:16:28,086 | INFO     | ..............................
[2026-01-29 21:17:30] 2026-01-29 20:16:28,197 | INFO     | 
[2026-01-29 21:17:30] 2026-01-29 20:16:28,197 | INFO     | job summary report
[2026-01-29 21:17:30] 2026-01-29 20:16:28,198 | INFO     | --------------------------------------------------
[2026-01-29 21:17:30] 2026-01-29 20:16:28,198 | INFO     | PanDA job id: 6986090188
[2026-01-29 21:17:30] 2026-01-29 20:16:28,198 | INFO     | task id: 48310620
[2026-01-29 21:17:30] 2026-01-29 20:16:28,198 | INFO     | errors: (none)
[2026-01-29 21:17:30] 2026-01-29 20:16:28,198 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 21:17:30] 2026-01-29 20:16:28,198 | INFO     | pilot state: finished 
[2026-01-29 21:17:30] 2026-01-29 20:16:28,198 | INFO     | transexitcode: 0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,198 | INFO     | exeerrorcode: 0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,198 | INFO     | exeerrordiag: 
[2026-01-29 21:17:30] 2026-01-29 20:16:28,198 | INFO     | exitcode: 0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,199 | INFO     | exitmsg: OK
[2026-01-29 21:17:30] 2026-01-29 20:16:28,199 | INFO     | cpuconsumptiontime: 50647 s
[2026-01-29 21:17:30] 2026-01-29 20:16:28,199 | INFO     | nevents: 400
[2026-01-29 21:17:30] 2026-01-29 20:16:28,199 | INFO     | neventsw: 0
[2026-01-29 21:17:30] 2026-01-29 20:16:28,199 | INFO     | pid: 4379
[2026-01-29 21:17:30] 2026-01-29 20:16:28,199 | INFO     | pgrp: 4379
[2026-01-29 21:17:30] 2026-01-29 20:16:28,199 | INFO     | corecount: 8
[2026-01-29 21:17:30] 2026-01-29 20:16:28,199 | INFO     | event service: False
[2026-01-29 21:17:30] 2026-01-29 20:16:28,199 | INFO     | sizes: {0: 2277777, 1: 2278238, 11: 2278238, 12612: 2308108, 12619: 2317302}
[2026-01-29 21:17:30] 2026-01-29 20:16:28,199 | INFO     | --------------------------------------------------
[2026-01-29 21:17:30] 2026-01-29 20:16:28,200 | INFO     | 
[2026-01-29 21:17:30] 2026-01-29 20:16:28,200 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-29 21:17:30] 2026-01-29 20:16:28,570 | INFO     | time since job start (12630s) is within the limit (349056.0s)
[2026-01-29 21:17:30] 2026-01-29 20:16:28,643 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,643 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,643 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,643 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,644 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,644 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 21:17:30] 2026-01-29 20:16:28,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,645 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 21:17:30] 2026-01-29 20:16:28,645 | INFO     | job 6986090188 has completed (purged errors)
[2026-01-29 21:17:30] 2026-01-29 20:16:28,645 | INFO     | overall cleanup function is called
[2026-01-29 21:17:30] 2026-01-29 20:16:29,656 | INFO     | --- collectZombieJob: --- 10, [4379]
[2026-01-29 21:17:30] 2026-01-29 20:16:29,656 | INFO     | zombie collector waiting for pid 4379
[2026-01-29 21:17:30] 2026-01-29 20:16:29,657 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 21:17:30] 2026-01-29 20:16:29,657 | INFO     | collected zombie processes
[2026-01-29 21:17:30] 2026-01-29 20:16:29,657 | INFO     | will attempt to kill all subprocesses of pid=4379
[2026-01-29 21:17:30] 2026-01-29 20:16:29,687 | INFO     | PID=32329 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 21:17:30] 2026-01-29 20:16:29,687 | INFO     | .. there are 2 such processes running
[2026-01-29 21:17:30] 2026-01-29 20:16:29,753 | INFO     | process IDs to be killed: [4379] (in reverse order)
[2026-01-29 21:17:30] 2026-01-29 20:16:30,580 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 21:17:30] 2026-01-29 20:16:30,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 21:17:30] 2026-01-29 20:16:30,582 | INFO     | did not find any defunct processes belonging to 4379
[2026-01-29 21:17:30] 2026-01-29 20:16:30,584 | INFO     | did not find any defunct processes belonging to 4379
[2026-01-29 21:17:30] 2026-01-29 20:16:30,584 | INFO     | ready for new job
[2026-01-29 21:17:30] 2026-01-29 20:16:30,584 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 21:17:30] 2026-01-29 20:16:30,586 | INFO     | **************************************
[2026-01-29 21:17:30] 2026-01-29 20:16:30,586 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 21:17:30] 2026-01-29 20:16:30,586 | INFO     | **************************************
[2026-01-29 21:17:30] 2026-01-29 20:16:30,586 | INFO     | 
[2026-01-29 21:17:30] 2026-01-29 20:16:30,587 | INFO     | pilot is running in a VM
[2026-01-29 21:17:30] 2026-01-29 20:16:30,587 | INFO     | architecture information:
[2026-01-29 21:17:30] 2026-01-29 20:16:30,593 | INFO     | executing command: cat /etc/os-release
[2026-01-29 21:17:30] 2026-01-29 20:16:30,802 | INFO     | cat /etc/os-release:
[2026-01-29 21:17:30] NAME="CentOS Linux"
[2026-01-29 21:17:30] VERSION="7 (Core)"
[2026-01-29 21:17:30] ID="centos"
[2026-01-29 21:17:30] ID_LIKE="rhel fedora"
[2026-01-29 21:17:30] VERSION_ID="7"
[2026-01-29 21:17:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 21:17:30] ANSI_COLOR="0;31"
[2026-01-29 21:17:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 21:17:30] HOME_URL="https://www.centos.org/"
[2026-01-29 21:17:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 21:17:30] 
[2026-01-29 21:17:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 21:17:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 21:17:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 21:17:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 21:17:30] 
[2026-01-29 21:17:30] 2026-01-29 20:16:30,805 | INFO     | **************************************
[2026-01-29 21:17:30] 2026-01-29 20:16:31,308 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-29 21:17:30] 2026-01-29 20:16:31,523 | INFO     | sufficient remaining disk space (496263757824 B)
[2026-01-29 21:17:30] 2026-01-29 20:16:31,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 21:17:30] 2026-01-29 20:16:31,523 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 21:17:30] 2026-01-29 20:16:31,523 | INFO     | update_server=False
[2026-01-29 21:17:30] 2026-01-29 20:16:31,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 21:17:30] 2026-01-29 20:16:31,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 21:17:30] 2026-01-29 20:16:31,752 | INFO     | all data control threads have been joined
[2026-01-29 21:17:30] 2026-01-29 20:16:31,906 | INFO     | all job control threads have been joined
[2026-01-29 21:17:30] 2026-01-29 20:16:32,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 21:17:30] 2026-01-29 20:16:32,377 | INFO     | aborting loop
[2026-01-29 21:17:30] 2026-01-29 20:16:32,529 | INFO     | [job] retrieve thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:32,758 | INFO     | [data] control thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:32,764 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:32,894 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:32,912 | INFO     | [job] control thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:32,954 | INFO     | all payload control threads have been joined
[2026-01-29 21:17:30] 2026-01-29 20:16:33,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 21:17:30] 2026-01-29 20:16:33,273 | INFO     | [data] copytool_in thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:33,383 | INFO     | [job] job monitor thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:33,406 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:33,517 | INFO     | [payload] failed_post thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:33,537 | INFO     | [data] copytool_out thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:33,763 | INFO     | [payload] validate_post thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:33,840 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:33,884 | INFO     | [job] validate thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:33,960 | INFO     | [payload] control thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:34,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 21:17:30] 2026-01-29 20:16:34,217 | INFO     | [job] queue monitor thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:16:38,077 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 21:17:30] 2026-01-29 20:17:01,803 | INFO     | PID=32329 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 21:17:30] 2026-01-29 20:17:01,804 | INFO     | .. there are 2 such processes running
[2026-01-29 21:17:30] 2026-01-29 20:17:01,805 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 21:17:30] 2026-01-29 20:17:01,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 21:17:30] 2026-01-29 20:17:01,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 21:17:30] 2026-01-29 20:17:19,564 | INFO     | [monitor] cgroup control has ended
[2026-01-29 21:17:30] 2026-01-29 20:17:20,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140201690912576)>', '<ExcThread(monitor, started 140200885876480)>']
[2026-01-29 21:17:30] 2026-01-29 20:17:20,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 21:17:30] 2026-01-29 20:17:20,917 | INFO     | [monitor] control thread has ended
[2026-01-29 21:17:30] 2026-01-29 20:17:25,597 | INFO     | all workflow threads have been joined
[2026-01-29 21:17:30] 2026-01-29 20:17:25,597 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 21:17:30] 2026-01-29 20:17:25,598 | INFO     | traces error code: 0
[2026-01-29 21:17:30] 2026-01-29 20:17:25,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 21:17:30] 2026-01-29 20:17:25,966 [wrapper] ==== pilot stdout END ====
[2026-01-29 21:17:30] 2026-01-29 20:17:26,003 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 21:17:30] 2026-01-29 20:17:26,128 [wrapper] pilotpid: 32329
[2026-01-29 21:17:30] 2026-01-29 20:17:26,220 [wrapper] Pilot exit status: 0
[2026-01-29 21:17:30] 2026-01-29 20:17:26,681 [wrapper] pandaids: 6986090188
[2026-01-29 21:17:30] 2026-01-29 20:17:27,700 [wrapper] cleanup supervisor_pilot 26263 32330
[2026-01-29 21:17:30] 2026-01-29 20:17:27,770 [wrapper] Test setup, not cleaning
[2026-01-29 21:17:30] 2026-01-29 20:17:27,870 [wrapper] apfmon messages muted
[2026-01-29 21:17:30] 2026-01-29 20:17:27,940 [wrapper] ==== wrapper stdout END ====
[2026-01-29 21:17:30] 2026-01-29 20:17:28,033 [wrapper] ==== wrapper stderr END ====
[2026-01-29 21:17:30]  *** Error codes and diagnostics ***
[2026-01-29 21:17:30]     "exeErrorCode": 0,
[2026-01-29 21:17:30]     "exeErrorDiag": "",
[2026-01-29 21:17:30]     "pilotErrorCode": 0,
[2026-01-29 21:17:30]     "pilotErrorDiag": "",
[2026-01-29 21:17:30]  *** Listing of results directory ***
[2026-01-29 21:17:30] total 718232
[2026-01-29 21:17:30] -rwx------. 1 boinc boinc     36322 Jan 28 16:25 runpilot2-wrapper.sh
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc    584422 Jan 28 16:25 pilot3.tar.gz
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc      5111 Jan 28 16:26 queuedata.json
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc       100 Jan 29 17:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 21:17:30] -rwxr-xr-x. 1 boinc boinc      7986 Jan 29 17:45 run_atlas
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc       105 Jan 29 17:45 job.xml
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc      6392 Jan 29 17:45 init_data.xml
[2026-01-29 21:17:30] -rw-r--r--. 2 boinc boinc 532678570 Jan 29 17:45 EVNT.48310618._000018.pool.root.1
[2026-01-29 21:17:30] -rw-r--r--. 2 boinc boinc     15845 Jan 29 17:45 start_atlas.sh
[2026-01-29 21:17:30] drwxrwx--x. 2 boinc boinc        68 Jan 29 17:45 shared
[2026-01-29 21:17:30] -rw-r--r--. 2 boinc boinc    597753 Jan 29 17:45 input.tar.gz
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc         0 Jan 29 17:45 boinc_lockfile
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc      2520 Jan 29 17:45 pandaJob.out
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc   1009660 Jan 29 17:45 agis_schedconf.cvmfs.json
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc       415 Jan 29 17:45 workernode_map.json
[2026-01-29 21:17:30] drwx------. 5 boinc boinc      4096 Jan 29 17:45 pilot3
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc 194365425 Jan 29 21:15 HITS.48310620._000711.pool.root.1
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc       531 Jan 29 21:15 boinc_task_state.xml
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc      1019 Jan 29 21:16 memory_monitor_summary.json
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc   1511668 Jan 29 21:16 agis_ddmendpoints.agis.ALL.json
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc    472397 Jan 29 21:16 log.48310620._000711.job.log.tgz.1
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc      6316 Jan 29 21:16 heartbeat.json
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc      8192 Jan 29 21:17 boinc_mmap_file
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc        28 Jan 29 21:17 wrapper_checkpoint.txt
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc        95 Jan 29 21:17 pilot_heartbeat.json
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc      4881 Jan 29 21:17 pilotlog.txt
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc   1777693 Jan 29 21:17 log.48310620._000711.job.log.1
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc       357 Jan 29 21:17 output.list
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc       620 Jan 29 21:17 runtime_log
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc   2263040 Jan 29 21:17 result.tar.gz
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc      8832 Jan 29 21:17 runtime_log.err
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc       654 Jan 29 21:17 BRULDmzaM58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqRGKDmqC3QTo.diag
[2026-01-29 21:17:30] -rw-r--r--. 1 boinc boinc     20782 Jan 29 21:17 stderr.txt
[2026-01-29 21:17:30] HITS file was successfully produced:
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc 194365425 Jan 29 21:15 shared/HITS.pool.root.1
[2026-01-29 21:17:30]  *** Contents of shared directory: ***
[2026-01-29 21:17:30] total 712820
[2026-01-29 21:17:30] -rw-r--r--. 2 boinc boinc 532678570 Jan 29 17:45 ATLAS.root_0
[2026-01-29 21:17:30] -rw-r--r--. 2 boinc boinc     15845 Jan 29 17:45 start_atlas.sh
[2026-01-29 21:17:30] -rw-r--r--. 2 boinc boinc    597753 Jan 29 17:45 input.tar.gz
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc 194365425 Jan 29 21:15 HITS.pool.root.1
[2026-01-29 21:17:30] -rw-------. 1 boinc boinc   2263040 Jan 29 21:17 result.tar.gz
21:17:32 (28351): run_atlas exited; CPU time 50756.591170
21:17:32 (28351): called boinc_finish(0)

</stderr_txt>
]]>

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