Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:00:01 (5453): wrapper (7.7.26015): starting
07:00:01 (5453): wrapper: running run_atlas (--nthreads 8)
[2026-01-30 07:00:01] Arguments: --nthreads 8
[2026-01-30 07:00:01] Threads: 8
[2026-01-30 07:00:01] Checking for CVMFS
[2026-01-30 07:00:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-30 07:00:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-30 07:00:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-30 07:00:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-30 07:00:47] 2.13.3.0 5670 0 25528 155652 3 1 1723278 4096000 0 130560 0 0 0.000 1336 197 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://131.225.189.146:3126 1
[2026-01-30 07:00:47] CVMFS is ok
[2026-01-30 07:00:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-30 07:00:47] Checking for apptainer binary...
[2026-01-30 07:00:47] apptainer is not installed, using version from CVMFS
[2026-01-30 07:00:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-30 07:00:48] gp
[2026-01-30 07:00:48] apptainer works
[2026-01-30 07:00:48] Set ATHENA_PROC_NUMBER=8
[2026-01-30 07:00:48] Set ATHENA_CORE_NUMBER=8
[2026-01-30 07:00:48] Starting ATLAS job with PandaID=6985858426
[2026-01-30 07:00:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-30 09:45:27]  *** The last 200 lines of the pilot log: ***
[2026-01-30 09:45:27] 2026-01-29 22:44:42,530 | INFO     | time since job start (9756s) is within the limit (349056.0s)
[2026-01-30 09:45:27] 2026-01-29 22:44:43,619 | INFO     | monitor loop #712: job 0:6985858426 is in state 'finished'
[2026-01-30 09:45:27] 2026-01-29 22:44:43,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,340 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,340 | INFO     | reading metadata from: /var/lib/boinc-client/slots/7/PanDA_Pilot-6985858426/jobReport.json
[2026-01-30 09:45:27] 2026-01-29 22:44:44,344 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/7/workernode_map.json
[2026-01-30 09:45:27] 2026-01-29 22:44:44,345 | INFO     | this job has now completed (state=finished)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,345 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,345 | INFO     | log transfer has been attempted: DONE
[2026-01-30 09:45:27] 2026-01-29 22:44:44,346 | INFO     | job 6985858426 has finished - writing final server update
[2026-01-30 09:45:27] 2026-01-29 22:44:44,346 | INFO     | total number of processed events: 400 (read)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,350 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6985858426/memory_monitor_summary.json (trf name=prmon)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,351 | INFO     | extracted standard info from prmon json
[2026-01-30 09:45:27] 2026-01-29 22:44:44,351 | INFO     | extracted standard memory fields from prmon json
[2026-01-30 09:45:27] 2026-01-29 22:44:44,351 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-30 09:45:27] 2026-01-29 22:44:44,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-30 09:45:27] 2026-01-29 22:44:44,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-30 09:45:27] 2026-01-29 22:44:44,356 | INFO     | fitting pss+swap vs Time
[2026-01-30 09:45:27] 2026-01-29 22:44:44,357 | INFO     | sum of square deviations: 1270051720.0
[2026-01-30 09:45:27] 2026-01-29 22:44:44,358 | INFO     | sum of deviations: 23837142111.5
[2026-01-30 09:45:27] 2026-01-29 22:44:44,359 | INFO     | mean x: 1769721805.5
[2026-01-30 09:45:27] 2026-01-29 22:44:44,359 | INFO     | mean y: 2488051.66875
[2026-01-30 09:45:27] 2026-01-29 22:44:44,359 | INFO     | intersect: -33212781461.5475
[2026-01-30 09:45:27] 2026-01-29 22:44:44,360 | INFO     | chi2: 2.9999606310718954
[2026-01-30 09:45:27] 2026-01-29 22:44:44,360 | INFO     | sum of square deviations: 1154663510.0
[2026-01-30 09:45:27] 2026-01-29 22:44:44,361 | INFO     | sum of deviations: 33076600289.000015
[2026-01-30 09:45:27] 2026-01-29 22:44:44,362 | INFO     | mean x: 1769721653.0
[2026-01-30 09:45:27] 2026-01-29 22:44:44,362 | INFO     | mean y: 2499925.187096774
[2026-01-30 09:45:27] 2026-01-29 22:44:44,362 | INFO     | intersect: -50693114192.790344
[2026-01-30 09:45:27] 2026-01-29 22:44:44,362 | INFO     | chi2: 2.3297764213375225
[2026-01-30 09:45:27] 2026-01-29 22:44:44,363 | INFO     | current chi2=2.3297764213375225 (change=22.33976682203706 %)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,363 | INFO     | right removable region: 154
[2026-01-30 09:45:27] 2026-01-29 22:44:44,363 | INFO     | sum of square deviations: 1154663510.0
[2026-01-30 09:45:27] 2026-01-29 22:44:44,364 | INFO     | sum of deviations: -12383763720.0
[2026-01-30 09:45:27] 2026-01-29 22:44:44,365 | INFO     | mean x: 1769721958.0
[2026-01-30 09:45:27] 2026-01-29 22:44:44,365 | INFO     | mean y: 2535712.412903226
[2026-01-30 09:45:27] 2026-01-29 22:44:44,365 | INFO     | intersect: 18982799995.613262
[2026-01-30 09:45:27] 2026-01-29 22:44:44,366 | INFO     | chi2: 0.9033441354272331
[2026-01-30 09:45:27] 2026-01-29 22:44:44,366 | INFO     | current chi2=0.9033441354272331 (change=69.88813366179191 %)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,366 | INFO     | sum of square deviations: 1046484737.5
[2026-01-30 09:45:27] 2026-01-29 22:44:44,367 | INFO     | sum of deviations: -13299532320.0
[2026-01-30 09:45:27] 2026-01-29 22:44:44,368 | INFO     | mean x: 1769722110.5
[2026-01-30 09:45:27] 2026-01-29 22:44:44,368 | INFO     | mean y: 2536778.986666667
[2026-01-30 09:45:27] 2026-01-29 22:44:44,368 | INFO     | intersect: 22493525479.15714
[2026-01-30 09:45:27] 2026-01-29 22:44:44,368 | INFO     | chi2: 0.7879018149971219
[2026-01-30 09:45:27] 2026-01-29 22:44:44,369 | INFO     | current chi2=0.7879018149971219 (change=12.779439850518681 %)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,369 | INFO     | left removable region: 20
[2026-01-30 09:45:27] 2026-01-29 22:44:44,369 | INFO     | sum of square deviations: 746051197.5
[2026-01-30 09:45:27] 2026-01-29 22:44:44,370 | INFO     | sum of deviations: 1917583220.4999998
[2026-01-30 09:45:27] 2026-01-29 22:44:44,370 | INFO     | mean x: 1769722232.5
[2026-01-30 09:45:27] 2026-01-29 22:44:44,371 | INFO     | mean y: 2542554.8582089553
[2026-01-30 09:45:27] 2026-01-29 22:44:44,371 | INFO     | intersect: -4546193067.254105
[2026-01-30 09:45:27] 2026-01-29 22:44:44,371 | INFO     | chi2: 0.0013990128312040752
[2026-01-30 09:45:27] 2026-01-29 22:44:44,372 | INFO     | current memory leak: 2.57 B/s (using 134 data points, chi2=0.00)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,372 | INFO     | could have reported an average CPU frequency of 1547 MHz (9 samples)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,372 | INFO     | ..............................
[2026-01-30 09:45:27] 2026-01-29 22:44:44,372 | INFO     | . Timing measurements:
[2026-01-30 09:45:27] 2026-01-29 22:44:44,373 | INFO     | . get job = 0 s
[2026-01-30 09:45:27] 2026-01-29 22:44:44,373 | INFO     | . initial setup = 13 s
[2026-01-30 09:45:27] 2026-01-29 22:44:44,373 | INFO     | . payload setup = 12 s
[2026-01-30 09:45:27] 2026-01-29 22:44:44,373 | INFO     | . stage-in = 0 s
[2026-01-30 09:45:27] 2026-01-29 22:44:44,373 | INFO     | . payload execution = 9722 s
[2026-01-30 09:45:27] 2026-01-29 22:44:44,373 | INFO     | . stage-out = 0 s
[2026-01-30 09:45:27] 2026-01-29 22:44:44,373 | INFO     | . log creation = 0 s
[2026-01-30 09:45:27] 2026-01-29 22:44:44,374 | INFO     | ..............................
[2026-01-30 09:45:27] 2026-01-29 22:44:44,459 | INFO     | 
[2026-01-30 09:45:27] 2026-01-29 22:44:44,459 | INFO     | job summary report
[2026-01-30 09:45:27] 2026-01-29 22:44:44,459 | INFO     | --------------------------------------------------
[2026-01-30 09:45:27] 2026-01-29 22:44:44,459 | INFO     | PanDA job id: 6985858426
[2026-01-30 09:45:27] 2026-01-29 22:44:44,460 | INFO     | task id: 48317872
[2026-01-30 09:45:27] 2026-01-29 22:44:44,460 | INFO     | errors: (none)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,460 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-30 09:45:27] 2026-01-29 22:44:44,460 | INFO     | pilot state: finished 
[2026-01-30 09:45:27] 2026-01-29 22:44:44,460 | INFO     | transexitcode: 0
[2026-01-30 09:45:27] 2026-01-29 22:44:44,461 | INFO     | exeerrorcode: 0
[2026-01-30 09:45:27] 2026-01-29 22:44:44,461 | INFO     | exeerrordiag: 
[2026-01-30 09:45:27] 2026-01-29 22:44:44,461 | INFO     | exitcode: 0
[2026-01-30 09:45:27] 2026-01-29 22:44:44,461 | INFO     | exitmsg: OK
[2026-01-30 09:45:27] 2026-01-29 22:44:44,461 | INFO     | cpuconsumptiontime: 69594 s
[2026-01-30 09:45:27] 2026-01-29 22:44:44,461 | INFO     | nevents: 400
[2026-01-30 09:45:27] 2026-01-29 22:44:44,461 | INFO     | neventsw: 0
[2026-01-30 09:45:27] 2026-01-29 22:44:44,462 | INFO     | pid: 14191
[2026-01-30 09:45:27] 2026-01-29 22:44:44,462 | INFO     | pgrp: 14191
[2026-01-30 09:45:27] 2026-01-29 22:44:44,462 | INFO     | corecount: 8
[2026-01-30 09:45:27] 2026-01-29 22:44:44,462 | INFO     | event service: False
[2026-01-30 09:45:27] 2026-01-29 22:44:44,462 | INFO     | sizes: {0: 2277175, 1: 2278300, 12: 2278300, 9738: 2306726, 9740: 2315738, 9742: 2315794, 9746: 2316180}
[2026-01-30 09:45:27] 2026-01-29 22:44:44,462 | INFO     | --------------------------------------------------
[2026-01-30 09:45:27] 2026-01-29 22:44:44,463 | INFO     | 
[2026-01-30 09:45:27] 2026-01-29 22:44:44,463 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2026-01-30 09:45:27] 2026-01-29 22:44:44,510 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,511 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,511 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,511 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,512 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,513 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,514 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-30 09:45:27] 2026-01-29 22:44:44,514 | INFO     | job 6985858426 has completed (purged errors)
[2026-01-30 09:45:27] 2026-01-29 22:44:44,514 | INFO     | overall cleanup function is called
[2026-01-30 09:45:27] 2026-01-29 22:44:45,526 | INFO     | --- collectZombieJob: --- 10, [14191]
[2026-01-30 09:45:27] 2026-01-29 22:44:45,527 | INFO     | zombie collector waiting for pid 14191
[2026-01-30 09:45:27] 2026-01-29 22:44:45,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-30 09:45:27] 2026-01-29 22:44:45,527 | INFO     | collected zombie processes
[2026-01-30 09:45:27] 2026-01-29 22:44:45,527 | INFO     | will attempt to kill all subprocesses of pid=14191
[2026-01-30 09:45:27] 2026-01-29 22:44:45,641 | INFO     | process IDs to be killed: [14191] (in reverse order)
[2026-01-30 09:45:27] 2026-01-29 22:44:45,716 | WARNING  | found no corresponding commands to process id(s)
[2026-01-30 09:45:27] 2026-01-29 22:44:45,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-30 09:45:27] 2026-01-29 22:44:45,720 | INFO     | did not find any defunct processes belonging to 14191
[2026-01-30 09:45:27] 2026-01-29 22:44:45,723 | INFO     | did not find any defunct processes belonging to 14191
[2026-01-30 09:45:27] 2026-01-29 22:44:45,723 | INFO     | ready for new job
[2026-01-30 09:45:27] 2026-01-29 22:44:45,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-30 09:45:27] 2026-01-29 22:44:45,725 | INFO     | **************************************
[2026-01-30 09:45:27] 2026-01-29 22:44:45,725 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-30 09:45:27] 2026-01-29 22:44:45,725 | INFO     | **************************************
[2026-01-30 09:45:27] 2026-01-29 22:44:45,725 | INFO     | 
[2026-01-30 09:45:27] 2026-01-29 22:44:45,726 | INFO     | architecture information:
[2026-01-30 09:45:27] 2026-01-29 22:44:45,726 | INFO     | executing command: cat /etc/os-release
[2026-01-30 09:45:27] 2026-01-29 22:44:45,745 | INFO     | cat /etc/os-release:
[2026-01-30 09:45:27] NAME="CentOS Linux"
[2026-01-30 09:45:27] VERSION="7 (Core)"
[2026-01-30 09:45:27] ID="centos"
[2026-01-30 09:45:27] ID_LIKE="rhel fedora"
[2026-01-30 09:45:27] VERSION_ID="7"
[2026-01-30 09:45:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-30 09:45:27] ANSI_COLOR="0;31"
[2026-01-30 09:45:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-30 09:45:27] HOME_URL="https://www.centos.org/"
[2026-01-30 09:45:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-30 09:45:27] 
[2026-01-30 09:45:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-30 09:45:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-30 09:45:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-30 09:45:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-30 09:45:27] 
[2026-01-30 09:45:27] 2026-01-29 22:44:45,746 | INFO     | **************************************
[2026-01-30 09:45:27] 2026-01-29 22:44:46,249 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2026-01-30 09:45:27] 2026-01-29 22:44:46,287 | INFO     | sufficient remaining disk space (27110932480 B)
[2026-01-30 09:45:27] 2026-01-29 22:44:46,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-30 09:45:27] 2026-01-29 22:44:46,288 | INFO     | current server update state: UPDATING_FINAL
[2026-01-30 09:45:27] 2026-01-29 22:44:46,288 | INFO     | update_server=False
[2026-01-30 09:45:27] 2026-01-29 22:44:46,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-30 09:45:27] 2026-01-29 22:44:46,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-30 09:45:27] 2026-01-29 22:44:46,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-30 09:45:27] 2026-01-29 22:44:46,289 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-30 09:45:27] 2026-01-29 22:44:46,906 | INFO     | all data control threads have been joined
[2026-01-30 09:45:27] 2026-01-29 22:44:47,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-30 09:45:27] 2026-01-29 22:44:47,128 | INFO     | aborting loop
[2026-01-30 09:45:27] 2026-01-29 22:44:47,266 | INFO     | all job control threads have been joined
[2026-01-30 09:45:27] 2026-01-29 22:44:47,294 | INFO     | [job] retrieve thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:47,295 | INFO     | [job] queue monitor thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:47,438 | INFO     | [data] copytool_in thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:47,547 | INFO     | all payload control threads have been joined
[2026-01-30 09:45:27] 2026-01-29 22:44:47,610 | INFO     | [payload] failed_post thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:47,912 | INFO     | [data] control thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:48,036 | INFO     | [job] validate thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:48,055 | INFO     | [job] create_data_payload thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:48,133 | INFO     | [job] job monitor thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:48,183 | INFO     | [payload] validate_post thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:48,271 | INFO     | [job] control thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:48,294 | INFO     | [data] copytool_out thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:48,467 | INFO     | [payload] validate_pre thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:48,552 | INFO     | [payload] control thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:48,769 | INFO     | [payload] execute_payloads thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:50,296 | INFO     | [data] queue_monitor thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:44:57,097 | INFO     | job.realtimelogging is not enabled
[2026-01-30 09:45:27] 2026-01-29 22:44:58,102 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-30 09:45:27] 2026-01-29 22:45:15,668 | INFO     | PID=9783 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-30 09:45:27] 2026-01-29 22:45:15,668 | INFO     | found 0 job(s) in 20 queues
[2026-01-30 09:45:27] 2026-01-29 22:45:15,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-30 09:45:27] 2026-01-29 22:45:15,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-30 09:45:27] 2026-01-29 22:45:21,817 | INFO     | [monitor] cgroup control has ended
[2026-01-30 09:45:27] 2026-01-29 22:45:21,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132955421562688)>', '<ExcThread(monitor, started 132955101959936)>']
[2026-01-30 09:45:27] 2026-01-29 22:45:22,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-30 09:45:27] 2026-01-29 22:45:22,704 | INFO     | [monitor] control thread has ended
[2026-01-30 09:45:27] 2026-01-29 22:45:27,023 | INFO     | all workflow threads have been joined
[2026-01-30 09:45:27] 2026-01-29 22:45:27,024 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-30 09:45:27] 2026-01-29 22:45:27,024 | INFO     | traces error code: 0
[2026-01-30 09:45:27] 2026-01-29 22:45:27,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-30 09:45:27] 2026-01-29 22:45:27,185 [wrapper] ==== pilot stdout END ====
[2026-01-30 09:45:27] 2026-01-29 22:45:27,191 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-30 09:45:27] 2026-01-29 22:45:27,196 [wrapper] pilotpid: 9783
[2026-01-30 09:45:27] 2026-01-29 22:45:27,202 [wrapper] Pilot exit status: 0
[2026-01-30 09:45:27] 2026-01-29 22:45:27,224 [wrapper] pandaids: 6985858426
[2026-01-30 09:45:27] 2026-01-29 22:45:27,288 [wrapper] cleanup supervisor_pilot   19515 9784
[2026-01-30 09:45:27] 2026-01-29 22:45:27,294 [wrapper] Test setup, not cleaning
[2026-01-30 09:45:27] 2026-01-29 22:45:27,300 [wrapper] apfmon messages muted
[2026-01-30 09:45:27] 2026-01-29 22:45:27,306 [wrapper] ==== wrapper stdout END ====
[2026-01-30 09:45:27] 2026-01-29 22:45:27,312 [wrapper] ==== wrapper stderr END ====
[2026-01-30 09:45:27]  *** Error codes and diagnostics ***
[2026-01-30 09:45:27]     "exeErrorCode": 0,
[2026-01-30 09:45:27]     "exeErrorDiag": "",
[2026-01-30 09:45:27]     "pilotErrorCode": 0,
[2026-01-30 09:45:27]     "pilotErrorDiag": "",
[2026-01-30 09:45:27]  *** Listing of results directory ***
[2026-01-30 09:45:27] total 676592
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc      5111 Jan 29 02:24 queuedata.json
[2026-01-30 09:45:27] -rwx------ 1 boinc boinc     36322 Jan 29 02:24 runpilot2-wrapper.sh
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc    584422 Jan 29 02:24 pilot3.tar.gz
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc       100 Jan 30 07:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-30 09:45:27] -rwxr-xr-x 1 boinc boinc      7986 Jan 30 07:00 run_atlas
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc       105 Jan 30 07:00 job.xml
[2026-01-30 09:45:27] -rw-r--r-- 2 boinc boinc 497457413 Jan 30 07:00 EVNT.48317869._000144.pool.root.1
[2026-01-30 09:45:27] drwxrwx--x 2 boinc boinc      4096 Jan 30 07:00 shared
[2026-01-30 09:45:27] -rw-r--r-- 2 boinc boinc    597740 Jan 30 07:00 input.tar.gz
[2026-01-30 09:45:27] -rw-r--r-- 2 boinc boinc     15845 Jan 30 07:00 start_atlas.sh
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc         0 Jan 30 07:00 boinc_setup_complete
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc      9217 Jan 30 07:00 init_data.xml
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc         0 Jan 30 07:00 boinc_lockfile
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc      2515 Jan 30 07:00 pandaJob.out
[2026-01-30 09:45:27] -rw------- 1 boinc boinc   1009660 Jan 30 07:01 agis_schedconf.cvmfs.json
[2026-01-30 09:45:27] -rw------- 1 boinc boinc   1511668 Jan 30 07:01 agis_ddmendpoints.agis.ALL.json
[2026-01-30 09:45:27] -rw------- 1 boinc boinc       424 Jan 30 07:02 workernode_map.json
[2026-01-30 09:45:27] drwx------ 5 boinc boinc      4096 Jan 30 07:02 pilot3
[2026-01-30 09:45:27] -rw------- 1 boinc boinc 187862755 Jan 30 09:44 HITS.48317872._007217.pool.root.1
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc       531 Jan 30 09:44 boinc_task_state.xml
[2026-01-30 09:45:27] -rw------- 1 boinc boinc      1032 Jan 30 09:44 memory_monitor_summary.json
[2026-01-30 09:45:27] -rw------- 1 boinc boinc    431401 Jan 30 09:44 log.48317872._007217.job.log.tgz.1
[2026-01-30 09:45:27] -rw------- 1 boinc boinc        95 Jan 30 09:44 pilot_heartbeat.json
[2026-01-30 09:45:27] -rw------- 1 boinc boinc      6321 Jan 30 09:44 heartbeat.json
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc        27 Jan 30 09:45 wrapper_checkpoint.txt
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc      8192 Jan 30 09:45 boinc_mmap_file
[2026-01-30 09:45:27] -rw------- 1 boinc boinc      4820 Jan 30 09:45 pilotlog.txt
[2026-01-30 09:45:27] -rw------- 1 boinc boinc   1348485 Jan 30 09:45 log.48317872._007217.job.log.1
[2026-01-30 09:45:27] -rw------- 1 boinc boinc       357 Jan 30 09:45 output.list
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc       620 Jan 30 09:45 runtime_log
[2026-01-30 09:45:27] -rw------- 1 boinc boinc   1802240 Jan 30 09:45 result.tar.gz
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc      8863 Jan 30 09:45 runtime_log.err
[2026-01-30 09:45:27] -rw------- 1 boinc boinc       642 Jan 30 09:45 aGRLDm0ZM58n9Rq4apOajLDm4fhM0noT9bVooX4SDmQJGKDmO4yvdm.diag
[2026-01-30 09:45:27] -rw-r--r-- 1 boinc boinc     20978 Jan 30 09:45 stderr.txt
[2026-01-30 09:45:27] HITS file was successfully produced:
[2026-01-30 09:45:27] -rw------- 1 boinc boinc 187862755 Jan 30 09:44 shared/HITS.pool.root.1
[2026-01-30 09:45:27]  *** Contents of shared directory: ***
[2026-01-30 09:45:27] total 671628
[2026-01-30 09:45:27] -rw-r--r-- 2 boinc boinc 497457413 Jan 30 07:00 ATLAS.root_0
[2026-01-30 09:45:27] -rw-r--r-- 2 boinc boinc    597740 Jan 30 07:00 input.tar.gz
[2026-01-30 09:45:27] -rw-r--r-- 2 boinc boinc     15845 Jan 30 07:00 start_atlas.sh
[2026-01-30 09:45:27] -rw------- 1 boinc boinc 187862755 Jan 30 09:44 HITS.pool.root.1
[2026-01-30 09:45:27] -rw------- 1 boinc boinc   1802240 Jan 30 09:45 result.tar.gz
09:45:29 (5453): run_atlas exited; CPU time 69519.610288
09:45:29 (5453): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN