Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:24:23 (628063): wrapper (7.7.26015): starting
08:24:23 (628063): wrapper: running run_atlas (--nthreads 12)
[2026-01-29 08:24:23] Arguments: --nthreads 12
[2026-01-29 08:24:23] Threads: 12
[2026-01-29 08:24:23] Checking for CVMFS
[2026-01-29 08:24:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 08:24:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 08:24:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 08:24:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 08:24:23] 2.13.3.0 587923 30 44504 155626 1 188 3314614 4096000 804 130560 0 114968 100.000 4 1 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-29 08:24:23] CVMFS is ok
[2026-01-29 08:24:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 08:24:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 08:24:23] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-29 08:24:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-29 08:24:23] Further information can be found at the LHC@home message board.
[2026-01-29 08:24:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 08:24:23] Checking for apptainer binary...
[2026-01-29 08:24:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 08:24:23] Running /usr/bin/apptainer --version
[2026-01-29 08:24:23] apptainer version 1.4.5
[2026-01-29 08:24:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 08:24:23] test-run
[2026-01-29 08:24:23] apptainer works
[2026-01-29 08:24:23] Set ATHENA_PROC_NUMBER=12
[2026-01-29 08:24:23] Set ATHENA_CORE_NUMBER=12
[2026-01-29 08:24:23] Starting ATLAS job with PandaID=6978071433
[2026-01-29 08:24:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 08:51:37]  *** The last 200 lines of the pilot log: ***
[2026-01-29 08:51:37]  is_altstaged=None
[2026-01-29 08:51:37]  is_tar=False
[2026-01-29 08:51:37]  lfn=log.48310670._002586.job.log.tgz.1
[2026-01-29 08:51:37]  mtime=0
[2026-01-29 08:51:37]  protocol_id=None
[2026-01-29 08:51:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-29 08:51:37]  replicas=None
[2026-01-29 08:51:37]  scope=mc23_13p6TeV
[2026-01-29 08:51:37]  status=None
[2026-01-29 08:51:37]  status_code=0
[2026-01-29 08:51:37]  storage_token=
[2026-01-29 08:51:37]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6978071433/log.48310670._002586.job.log.tgz.1
[2026-01-29 08:51:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/74/log.48310670._002586.job.log.tgz.1
[2026-01-29 08:51:37]  workdir=None
[2026-01-29 08:51:37] ]
[2026-01-29 08:51:37] 2026-01-29 08:50:53,158 | INFO     | transferring file log.48310670._002586.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6978071433/log.48310670._002586.job.log.tgz.1 to /var/lib/boinc
[2026-01-29 08:51:37] 2026-01-29 08:50:53,158 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6978071433/log.48310670._002586.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.483106
[2026-01-29 08:51:37] 2026-01-29 08:50:53,169 | INFO     | adding to output.list: log.48310670._002586.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/74/log.48310670._002586.job.log.tg
[2026-01-29 08:51:37] 2026-01-29 08:50:53,170 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-29 08:51:37] 2026-01-29 08:50:53,170 | INFO     | summary of transferred files:
[2026-01-29 08:51:37] 2026-01-29 08:50:53,170 | INFO     |  -- lfn=log.48310670._002586.job.log.tgz.1, status_code=0, status=transferred
[2026-01-29 08:51:37] 2026-01-29 08:50:53,170 | INFO     | stage-out finished correctly
[2026-01-29 08:51:37] 2026-01-29 08:50:53,206 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-29 08:51:37] 2026-01-29 08:50:53,578 | INFO     | time since job start (1584s) is within the limit (349056.0s)
[2026-01-29 08:51:37] 2026-01-29 08:50:54,079 | INFO     | job 6978071433 has state=finished
[2026-01-29 08:51:37] 2026-01-29 08:50:54,079 | INFO     | preparing for final server update for job 6978071433 in state='finished'
[2026-01-29 08:51:37] 2026-01-29 08:50:54,079 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-6978071433/jobReport.json
[2026-01-29 08:51:37] 2026-01-29 08:50:54,080 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-01-29 08:51:37] 2026-01-29 08:50:54,081 | INFO     | this job has now completed (state=finished)
[2026-01-29 08:51:37] 2026-01-29 08:50:54,081 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-29 08:51:37] 2026-01-29 08:50:54,081 | INFO     | log transfer has been attempted: DONE
[2026-01-29 08:51:37] 2026-01-29 08:50:54,081 | INFO     | job 6978071433 has finished - writing final server update
[2026-01-29 08:51:37] 2026-01-29 08:50:54,081 | INFO     | total number of processed events: 400 (read)
[2026-01-29 08:51:37] 2026-01-29 08:50:54,083 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6978071433/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 08:51:37] 2026-01-29 08:50:54,083 | INFO     | extracted standard info from prmon json
[2026-01-29 08:51:37] 2026-01-29 08:50:54,083 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 08:51:37] 2026-01-29 08:50:54,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 08:51:37] 2026-01-29 08:50:54,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 08:51:37] 2026-01-29 08:50:54,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 08:51:37] 2026-01-29 08:50:54,083 | INFO     | fitting pss+swap vs Time
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | sum of square deviations: 2120970.0
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | sum of deviations: 355957814.0
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | mean x: 1769675938.0
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | mean y: 2858067.8421052634
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | intersect: -296998032269.5411
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | chi2: 0.02902535634389336
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | current memory leak: 167.83 B/s (using 19 data points, chi2=0.03)
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | could have reported an average CPU frequency of 4291 MHz (4 samples)
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | ..............................
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | . Timing measurements:
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | . get job = 0 s
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | . initial setup = 3 s
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | . payload setup = 1 s
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | . stage-in = 0 s
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | . payload execution = 1567 s
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | . stage-out = 0 s
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | . log creation = 0 s
[2026-01-29 08:51:37] 2026-01-29 08:50:54,084 | INFO     | ..............................
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | 
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | job summary report
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | --------------------------------------------------
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | PanDA job id: 6978071433
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | task id: 48310670
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | errors: (none)
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | pilot state: finished 
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | transexitcode: 0
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | exeerrorcode: 0
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | exeerrordiag: 
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | exitcode: 0
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | exitmsg: OK
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | cpuconsumptiontime: 14510 s
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | nevents: 400
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | neventsw: 0
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | pid: 636486
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | pgrp: 636486
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | corecount: 12
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | event service: False
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | sizes: {0: 2284250, 11: 2284250, 1572: 2309072, 1573: 2318140, 1574: 2318278}
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | --------------------------------------------------
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | 
[2026-01-29 08:51:37] 2026-01-29 08:50:54,119 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-29 08:51:37] 2026-01-29 08:50:54,141 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,141 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,141 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | job 6978071433 has completed (purged errors)
[2026-01-29 08:51:37] 2026-01-29 08:50:54,142 | INFO     | overall cleanup function is called
[2026-01-29 08:51:37] 2026-01-29 08:50:54,613 | WARNING  | process 636486 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 08:51:37] 2026-01-29 08:50:54,635 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 08:51:37] 2026-01-29 08:50:54,661 | INFO     | number of running child processes to parent process 636486: 1
[2026-01-29 08:51:37] 2026-01-29 08:50:54,662 | INFO     | maximum number of monitored processes: 6
[2026-01-29 08:51:37] 2026-01-29 08:50:54,662 | INFO     | aborting job monitoring since job object (job id=6978071433) has expired
[2026-01-29 08:51:37] 2026-01-29 08:50:55,149 | INFO     | --- collectZombieJob: --- 10, [636486]
[2026-01-29 08:51:37] 2026-01-29 08:50:55,149 | INFO     | zombie collector waiting for pid 636486
[2026-01-29 08:51:37] 2026-01-29 08:50:55,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 08:51:37] 2026-01-29 08:50:55,149 | INFO     | collected zombie processes
[2026-01-29 08:51:37] 2026-01-29 08:50:55,149 | INFO     | will attempt to kill all subprocesses of pid=636486
[2026-01-29 08:51:37] 2026-01-29 08:50:55,176 | INFO     | process IDs to be killed: [636486] (in reverse order)
[2026-01-29 08:51:37] 2026-01-29 08:50:55,208 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 08:51:37] 2026-01-29 08:50:55,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 08:51:37] 2026-01-29 08:50:55,210 | INFO     | did not find any defunct processes belonging to 636486
[2026-01-29 08:51:37] 2026-01-29 08:50:55,210 | INFO     | did not find any defunct processes belonging to 636486
[2026-01-29 08:51:37] 2026-01-29 08:50:55,211 | INFO     | ready for new job
[2026-01-29 08:51:37] 2026-01-29 08:50:55,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 08:51:37] 2026-01-29 08:50:55,211 | INFO     | **************************************
[2026-01-29 08:51:37] 2026-01-29 08:50:55,211 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 08:51:37] 2026-01-29 08:50:55,211 | INFO     | **************************************
[2026-01-29 08:51:37] 2026-01-29 08:50:55,211 | INFO     | 
[2026-01-29 08:51:37] 2026-01-29 08:50:55,212 | INFO     | pilot is running in a VM
[2026-01-29 08:51:37] 2026-01-29 08:50:55,212 | INFO     | architecture information:
[2026-01-29 08:51:37] 2026-01-29 08:50:55,212 | INFO     | executing command: cat /etc/os-release
[2026-01-29 08:51:37] 2026-01-29 08:50:55,220 | INFO     | cat /etc/os-release:
[2026-01-29 08:51:37] NAME="CentOS Linux"
[2026-01-29 08:51:37] VERSION="7 (Core)"
[2026-01-29 08:51:37] ID="centos"
[2026-01-29 08:51:37] ID_LIKE="rhel fedora"
[2026-01-29 08:51:37] VERSION_ID="7"
[2026-01-29 08:51:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 08:51:37] ANSI_COLOR="0;31"
[2026-01-29 08:51:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 08:51:37] HOME_URL="https://www.centos.org/"
[2026-01-29 08:51:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 08:51:37] 
[2026-01-29 08:51:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 08:51:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 08:51:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 08:51:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 08:51:37] 
[2026-01-29 08:51:37] 2026-01-29 08:50:55,220 | INFO     | **************************************
[2026-01-29 08:51:37] 2026-01-29 08:50:55,723 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-29 08:51:37] 2026-01-29 08:50:55,739 | INFO     | sufficient remaining disk space (64984449024 B)
[2026-01-29 08:51:37] 2026-01-29 08:50:55,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 08:51:37] 2026-01-29 08:50:55,739 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 08:51:37] 2026-01-29 08:50:55,739 | INFO     | update_server=False
[2026-01-29 08:51:37] 2026-01-29 08:50:55,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 08:51:37] 2026-01-29 08:50:55,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 08:51:37] 2026-01-29 08:50:55,739 | INFO     | aborting loop
[2026-01-29 08:51:37] 2026-01-29 08:50:55,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 08:51:37] 2026-01-29 08:50:55,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 08:51:37] 2026-01-29 08:50:56,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 08:51:37] 2026-01-29 08:50:56,546 | INFO     | all data control threads have been joined
[2026-01-29 08:51:37] 2026-01-29 08:50:56,576 | INFO     | all payload control threads have been joined
[2026-01-29 08:51:37] 2026-01-29 08:50:56,742 | INFO     | [job] retrieve thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:56,744 | INFO     | [job] job monitor thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:56,745 | INFO     | [job] queue monitor thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:56,818 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:56,940 | INFO     | all job control threads have been joined
[2026-01-29 08:51:37] 2026-01-29 08:50:57,066 | INFO     | [payload] validate_post thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:57,438 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:57,439 | INFO     | [job] validate thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:57,455 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:57,461 | INFO     | [data] copytool_in thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:57,474 | INFO     | [payload] failed_post thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:57,551 | INFO     | [data] control thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:57,581 | INFO     | [payload] control thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:57,945 | INFO     | [job] control thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:58,217 | INFO     | [data] copytool_out thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:50:59,745 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:51:06,746 | INFO     | job.realtimelogging is not enabled
[2026-01-29 08:51:37] 2026-01-29 08:51:07,751 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 08:51:37] 2026-01-29 08:51:26,645 | INFO     | PID=631922 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-29 08:51:37] 2026-01-29 08:51:26,645 | INFO     | .. there are 2 such processes running
[2026-01-29 08:51:37] 2026-01-29 08:51:26,645 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 08:51:37] 2026-01-29 08:51:26,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 08:51:37] 2026-01-29 08:51:26,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 08:51:37] 2026-01-29 08:51:31,997 | INFO     | [monitor] cgroup control has ended
[2026-01-29 08:51:37] 2026-01-29 08:51:32,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138966947198784)>', '<ExcThread(monitor, started 138966460253952)>']
[2026-01-29 08:51:37] 2026-01-29 08:51:33,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 08:51:37] 2026-01-29 08:51:33,681 | INFO     | [monitor] control thread has ended
[2026-01-29 08:51:37] 2026-01-29 08:51:37,856 | INFO     | all workflow threads have been joined
[2026-01-29 08:51:37] 2026-01-29 08:51:37,856 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 08:51:37] 2026-01-29 08:51:37,856 | INFO     | traces error code: 0
[2026-01-29 08:51:37] 2026-01-29 08:51:37,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 08:51:37] 2026-01-29 08:51:37,894 [wrapper] ==== pilot stdout END ====
[2026-01-29 08:51:37] 2026-01-29 08:51:37,896 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 08:51:37] 2026-01-29 08:51:37,897 [wrapper] pilotpid: 631922
[2026-01-29 08:51:37] 2026-01-29 08:51:37,898 [wrapper] Pilot exit status: 0
[2026-01-29 08:51:37] 2026-01-29 08:51:37,901 [wrapper] pandaids: 6978071433
[2026-01-29 08:51:37] 2026-01-29 08:51:37,912 [wrapper] cleanup supervisor_pilot  641159 631923
[2026-01-29 08:51:37] 2026-01-29 08:51:37,912 [wrapper] Test setup, not cleaning
[2026-01-29 08:51:37] 2026-01-29 08:51:37,913 [wrapper] apfmon messages muted
[2026-01-29 08:51:37] 2026-01-29 08:51:37,914 [wrapper] ==== wrapper stdout END ====
[2026-01-29 08:51:37] 2026-01-29 08:51:37,915 [wrapper] ==== wrapper stderr END ====
[2026-01-29 08:51:37]  *** Error codes and diagnostics ***
[2026-01-29 08:51:37]     "exeErrorCode": 0,
[2026-01-29 08:51:37]     "exeErrorDiag": "",
[2026-01-29 08:51:37]     "pilotErrorCode": 0,
[2026-01-29 08:51:37]     "pilotErrorDiag": "",
[2026-01-29 08:51:37]  *** Listing of results directory ***
[2026-01-29 08:51:37] total 668876
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc    584422 Jan 23 00:32 pilot3.tar.gz
[2026-01-29 08:51:37] -rwx------ 1 boinc boinc     36322 Jan 23 00:33 runpilot2-wrapper.sh
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc      5111 Jan 23 00:37 queuedata.json
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc       100 Jan 29 08:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 08:51:37] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 08:24 run_atlas
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc       105 Jan 29 08:24 job.xml
[2026-01-29 08:51:37] -rw-r--r-- 2 boinc boinc     15845 Jan 29 08:24 start_atlas.sh
[2026-01-29 08:51:37] drwxrwx--x 2 boinc boinc      4096 Jan 29 08:24 shared
[2026-01-29 08:51:37] -rw-r--r-- 2 boinc boinc    597753 Jan 29 08:24 input.tar.gz
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc      7993 Jan 29 08:24 init_data.xml
[2026-01-29 08:51:37] -rw-r--r-- 2 boinc boinc 500812831 Jan 29 08:24 EVNT.48310665._000053.pool.root.1
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc         0 Jan 29 08:24 boinc_lockfile
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc      2524 Jan 29 08:24 pandaJob.out
[2026-01-29 08:51:37] -rw------- 1 boinc boinc   1005755 Jan 29 08:24 agis_schedconf.cvmfs.json
[2026-01-29 08:51:37] -rw------- 1 boinc boinc   1516246 Jan 29 08:24 agis_ddmendpoints.agis.ALL.json
[2026-01-29 08:51:37] -rw------- 1 boinc boinc       420 Jan 29 08:24 workernode_map.json
[2026-01-29 08:51:37] drwx------ 5 boinc boinc      4096 Jan 29 08:24 pilot3
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc       530 Jan 29 08:50 boinc_task_state.xml
[2026-01-29 08:51:37] -rw------- 1 boinc boinc 178881088 Jan 29 08:50 HITS.48310670._002586.pool.root.1
[2026-01-29 08:51:37] -rw------- 1 boinc boinc        95 Jan 29 08:50 pilot_heartbeat.json
[2026-01-29 08:51:37] -rw------- 1 boinc boinc      1019 Jan 29 08:50 memory_monitor_summary.json
[2026-01-29 08:51:37] -rw------- 1 boinc boinc    368859 Jan 29 08:50 log.48310670._002586.job.log.tgz.1
[2026-01-29 08:51:37] -rw------- 1 boinc boinc      6277 Jan 29 08:50 heartbeat.json
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc        27 Jan 29 08:51 wrapper_checkpoint.txt
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc      8192 Jan 29 08:51 boinc_mmap_file
[2026-01-29 08:51:37] -rw------- 1 boinc boinc      4959 Jan 29 08:51 pilotlog.txt
[2026-01-29 08:51:37] -rw------- 1 boinc boinc    274615 Jan 29 08:51 log.48310670._002586.job.log.1
[2026-01-29 08:51:37] -rw------- 1 boinc boinc       357 Jan 29 08:51 output.list
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc       620 Jan 29 08:51 runtime_log
[2026-01-29 08:51:37] -rw------- 1 boinc boinc    665600 Jan 29 08:51 result.tar.gz
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc      8889 Jan 29 08:51 runtime_log.err
[2026-01-29 08:51:37] -rw------- 1 boinc boinc       640 Jan 29 08:51 I7uLDm9HK38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIi1KDm210O1n.diag
[2026-01-29 08:51:37] -rw-r--r-- 1 boinc boinc     21611 Jan 29 08:51 stderr.txt
[2026-01-29 08:51:37] HITS file was successfully produced:
[2026-01-29 08:51:37] -rw------- 1 boinc boinc 178881088 Jan 29 08:50 shared/HITS.pool.root.1
[2026-01-29 08:51:37]  *** Contents of shared directory: ***
[2026-01-29 08:51:37] total 665024
[2026-01-29 08:51:37] -rw-r--r-- 2 boinc boinc     15845 Jan 29 08:24 start_atlas.sh
[2026-01-29 08:51:37] -rw-r--r-- 2 boinc boinc    597753 Jan 29 08:24 input.tar.gz
[2026-01-29 08:51:37] -rw-r--r-- 2 boinc boinc 500812831 Jan 29 08:24 ATLAS.root_0
[2026-01-29 08:51:37] -rw------- 1 boinc boinc 178881088 Jan 29 08:50 HITS.pool.root.1
[2026-01-29 08:51:37] -rw------- 1 boinc boinc    665600 Jan 29 08:51 result.tar.gz
08:51:39 (628063): run_atlas exited; CPU time 14514.952409
08:51:39 (628063): called boinc_finish(0)

</stderr_txt>
]]>

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