Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:10 (297653): wrapper (7.7.26015): starting
00:01:10 (297653): wrapper: running run_atlas (--nthreads 11)
[2026-01-29 00:01:10] Arguments: --nthreads 11
[2026-01-29 00:01:10] Threads: 11
[2026-01-29 00:01:10] Checking for CVMFS
[2026-01-29 00:01:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 00:01:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 00:01:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 00:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 00:01:12] 2.13.3.0 11596 3692 90700 155626 1 484 23612679 40960001 14281 16776704 0 1908072 99.668 1038435 10845 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-29 00:01:12] CVMFS is ok
[2026-01-29 00:01:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 00:01:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 00:01:12] Further information can be found at the LHC@home message board.
[2026-01-29 00:01:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 00:01:12] Checking for apptainer binary...
[2026-01-29 00:01:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 00:01:12] Running /usr/bin/apptainer --version
[2026-01-29 00:01:12] apptainer version 1.4.5-2.el9
[2026-01-29 00:01:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 00:01:13] c7-10-13.aglt2.org
[2026-01-29 00:01:13] apptainer works
[2026-01-29 00:01:13] Set ATHENA_PROC_NUMBER=11
[2026-01-29 00:01:13] Set ATHENA_CORE_NUMBER=11
[2026-01-29 00:01:13] Starting ATLAS job with PandaID=6990486742
[2026-01-29 00:01:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:20:08 (297653): BOINC client no longer exists - exiting
14:20:08 (297653): timer handler: client dead, exiting
14:31:38 (1257158): wrapper (7.7.26015): starting
14:31:38 (1257158): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 14:31:39] Arguments: --nthreads 8
[2026-01-29 14:31:39] Threads: 8
[2026-01-29 14:31:39] This job has been restarted, cleaning up previous attempt
[2026-01-29 14:31:39] Checking for CVMFS
[2026-01-29 14:31:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 14:31:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 14:31:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 14:31:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 14:31:41] 2.13.3.0 11596 4563 80272 155652 0 17 25257548 40960000 12560 16776704 0 2190292 99.688 1186845 10925 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-29 14:31:41] CVMFS is ok
[2026-01-29 14:31:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 14:31:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 14:31:42] Further information can be found at the LHC@home message board.
[2026-01-29 14:31:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 14:31:42] Checking for apptainer binary...
[2026-01-29 14:31:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 14:31:42] Running /usr/bin/apptainer --version
[2026-01-29 14:31:42] apptainer version 1.4.5-2.el9
[2026-01-29 14:31:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 14:31:42] c7-10-13.aglt2.org
[2026-01-29 14:31:42] apptainer works
[2026-01-29 14:31:42] Set ATHENA_PROC_NUMBER=8
[2026-01-29 14:31:42] Set ATHENA_CORE_NUMBER=8
[2026-01-29 14:31:42] Starting ATLAS job with PandaID=6990486742
[2026-01-29 14:31:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 23:45:42]  *** The last 200 lines of the pilot log: ***
[2026-01-29 23:45:43] 2026-01-30 04:45:00,012 | INFO     | extracted standard info from prmon json
[2026-01-29 23:45:43] 2026-01-30 04:45:00,013 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 23:45:43] 2026-01-30 04:45:00,013 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 23:45:43] 2026-01-30 04:45:00,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 23:45:43] 2026-01-30 04:45:00,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 23:45:43] 2026-01-30 04:45:00,258 | INFO     | fitting pss+swap vs Time
[2026-01-29 23:45:43] 2026-01-30 04:45:00,300 | INFO     | sum of square deviations: 49369227806.48165
[2026-01-29 23:45:43] 2026-01-30 04:45:00,518 | INFO     | sum of deviations: 182114018071.85806
[2026-01-29 23:45:43] 2026-01-30 04:45:00,518 | INFO     | mean x: 1769731716.3450184
[2026-01-29 23:45:43] 2026-01-30 04:45:00,518 | INFO     | mean y: 2489776.7066420666
[2026-01-29 23:45:43] 2026-01-30 04:45:00,559 | INFO     | intersect: -6525725633.834647
[2026-01-29 23:45:43] 2026-01-30 04:45:00,561 | INFO     | chi2: 4.346254020235375
[2026-01-29 23:45:43] 2026-01-30 04:45:00,598 | INFO     | sum of square deviations: 48015532182.08174
[2026-01-29 23:45:43] 2026-01-30 04:45:01,020 | INFO     | sum of deviations: 248730136224.2683
[2026-01-29 23:45:43] 2026-01-30 04:45:01,020 | INFO     | mean x: 1769731563.8510242
[2026-01-29 23:45:43] 2026-01-30 04:45:01,020 | INFO     | mean y: 2497237.6033519553
[2026-01-29 23:45:43] 2026-01-30 04:45:01,021 | INFO     | intersect: -9165069025.909176
[2026-01-29 23:45:43] 2026-01-30 04:45:01,178 | INFO     | chi2: 2.966046125035428
[2026-01-29 23:45:43] 2026-01-30 04:45:01,179 | INFO     | current chi2=2.966046125035428 (change=31.756263871691527 %)
[2026-01-29 23:45:43] 2026-01-30 04:45:01,206 | INFO     | sum of square deviations: 46686716109.26866
[2026-01-29 23:45:43] 2026-01-30 04:45:01,391 | INFO     | sum of deviations: 245868844872.17102
[2026-01-29 23:45:43] 2026-01-30 04:45:01,401 | INFO     | mean x: 1769731411.3515038
[2026-01-29 23:45:43] 2026-01-30 04:45:01,401 | INFO     | mean y: 2496909.2236842103
[2026-01-29 23:45:43] 2026-01-30 04:45:01,401 | INFO     | intersect: -9317537869.504456
[2026-01-29 23:45:43] 2026-01-30 04:45:01,409 | INFO     | chi2: 2.9660513665585104
[2026-01-29 23:45:43] 2026-01-30 04:45:01,409 | INFO     | current chi2=2.9660513665585104 (change=-0.00017671751757301982 %)
[2026-01-29 23:45:43] 2026-01-30 04:45:01,410 | INFO     | right removable region: 531
[2026-01-29 23:45:43] 2026-01-30 04:45:01,419 | INFO     | sum of square deviations: 48015318804.08175
[2026-01-29 23:45:43] 2026-01-30 04:45:01,559 | INFO     | time since job start (33152s) is within the limit (349056.0s)
[2026-01-29 23:45:43] 2026-01-30 04:45:01,620 | INFO     | sum of deviations: 43547385420.99817
[2026-01-29 23:45:43] 2026-01-30 04:45:01,621 | INFO     | mean x: 1769731868.8510242
[2026-01-29 23:45:43] 2026-01-30 04:45:01,621 | INFO     | mean y: 2505357.9124767226
[2026-01-29 23:45:43] 2026-01-30 04:45:01,621 | INFO     | intersect: -1602548981.0816758
[2026-01-29 23:45:43] 2026-01-30 04:45:01,623 | INFO     | chi2: 1.8067535978342026
[2026-01-29 23:45:43] 2026-01-30 04:45:01,623 | INFO     | current chi2=1.8067535978342026 (change=58.42963643122828 %)
[2026-01-29 23:45:43] 2026-01-30 04:45:01,625 | INFO     | sum of square deviations: 46686387502.14267
[2026-01-29 23:45:43] 2026-01-30 04:45:01,669 | INFO     | monitor loop #1925: job 0:6990486742 is in state 'finished'
[2026-01-29 23:45:43] 2026-01-30 04:45:01,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-29 23:45:43] 2026-01-30 04:45:01,701 | INFO     | sum of deviations: -4767597639.642883
[2026-01-29 23:45:43] 2026-01-30 04:45:01,701 | INFO     | mean x: 1769732021.357143
[2026-01-29 23:45:43] 2026-01-30 04:45:01,701 | INFO     | mean y: 2510898.577067669
[2026-01-29 23:45:43] 2026-01-30 04:45:01,701 | INFO     | intersect: 183235316.5337046
[2026-01-29 23:45:43] 2026-01-30 04:45:01,703 | INFO     | chi2: 1.5334677398568743
[2026-01-29 23:45:43] 2026-01-30 04:45:01,704 | INFO     | current chi2=1.5334677398568743 (change=15.125795698147352 %)
[2026-01-29 23:45:43] 2026-01-30 04:45:01,704 | INFO     | left removable region: 20
[2026-01-29 23:45:43] 2026-01-30 04:45:01,725 | INFO     | sum of square deviations: 41372917158.21533
[2026-01-29 23:45:43] 2026-01-30 04:45:01,900 | INFO     | sum of deviations: 22949366091.61451
[2026-01-29 23:45:43] 2026-01-30 04:45:01,901 | INFO     | mean x: 1769731990.8688846
[2026-01-29 23:45:43] 2026-01-30 04:45:01,901 | INFO     | mean y: 2523220.5166340508
[2026-01-29 23:45:43] 2026-01-30 04:45:01,901 | INFO     | intersect: -979138942.3706917
[2026-01-29 23:45:43] 2026-01-30 04:45:01,935 | INFO     | chi2: 0.031038630327725452
[2026-01-29 23:45:43] 2026-01-30 04:45:01,936 | INFO     | current memory leak: 0.55 B/s (using 511 data points, chi2=0.03)
[2026-01-29 23:45:43] 2026-01-30 04:45:01,938 | INFO     | could have reported an average CPU frequency of 3292 MHz (22 samples)
[2026-01-29 23:45:43] 2026-01-30 04:45:01,938 | INFO     | ..............................
[2026-01-29 23:45:43] 2026-01-30 04:45:01,967 | INFO     | . Timing measurements:
[2026-01-29 23:45:43] 2026-01-30 04:45:01,968 | INFO     | . get job = 0 s
[2026-01-29 23:45:43] 2026-01-30 04:45:01,968 | INFO     | . initial setup = 4 s
[2026-01-29 23:45:43] 2026-01-30 04:45:01,968 | INFO     | . payload setup = 35 s
[2026-01-29 23:45:43] 2026-01-30 04:45:01,968 | INFO     | . stage-in = 0 s
[2026-01-29 23:45:43] 2026-01-30 04:45:01,968 | INFO     | . payload execution = 33081 s
[2026-01-29 23:45:43] 2026-01-30 04:45:01,968 | INFO     | . stage-out = 12 s
[2026-01-29 23:45:43] 2026-01-30 04:45:01,968 | INFO     | . log creation = 2 s
[2026-01-29 23:45:43] 2026-01-30 04:45:01,969 | INFO     | ..............................
[2026-01-29 23:45:43] 2026-01-30 04:45:03,590 | INFO     | time since job start (33154s) is within the limit (349056.0s)
[2026-01-29 23:45:43] 2026-01-30 04:45:03,870 | INFO     | 
[2026-01-29 23:45:43] 2026-01-30 04:45:03,904 | INFO     | job summary report
[2026-01-29 23:45:43] 2026-01-30 04:45:03,905 | INFO     | --------------------------------------------------
[2026-01-29 23:45:43] 2026-01-30 04:45:03,905 | INFO     | PanDA job id: 6990486742
[2026-01-29 23:45:43] 2026-01-30 04:45:03,905 | INFO     | task id: 48317971
[2026-01-29 23:45:43] 2026-01-30 04:45:03,905 | INFO     | errors: (none)
[2026-01-29 23:45:43] 2026-01-30 04:45:03,905 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 23:45:43] 2026-01-30 04:45:03,905 | INFO     | pilot state: finished 
[2026-01-29 23:45:43] 2026-01-30 04:45:03,906 | INFO     | transexitcode: 0
[2026-01-29 23:45:43] 2026-01-30 04:45:03,906 | INFO     | exeerrorcode: 0
[2026-01-29 23:45:43] 2026-01-30 04:45:03,906 | INFO     | exeerrordiag: 
[2026-01-29 23:45:43] 2026-01-30 04:45:03,906 | INFO     | exitcode: 0
[2026-01-29 23:45:43] 2026-01-30 04:45:03,906 | INFO     | exitmsg: OK
[2026-01-29 23:45:43] 2026-01-30 04:45:03,906 | INFO     | cpuconsumptiontime: 113256 s
[2026-01-29 23:45:43] 2026-01-30 04:45:03,907 | INFO     | nevents: 400
[2026-01-29 23:45:43] 2026-01-30 04:45:03,907 | INFO     | neventsw: 0
[2026-01-29 23:45:43] 2026-01-30 04:45:03,907 | INFO     | pid: 1274579
[2026-01-29 23:45:43] 2026-01-30 04:45:03,907 | INFO     | pgrp: 1274579
[2026-01-29 23:45:43] 2026-01-30 04:45:03,907 | INFO     | corecount: 8
[2026-01-29 23:45:43] 2026-01-30 04:45:03,907 | INFO     | event service: False
[2026-01-29 23:45:43] 2026-01-30 04:45:03,908 | INFO     | sizes: {0: 2277713, 1: 2277769, 2: 2277825, 3: 2278286, 4: 2278286, 33124: 2317136, 33125: 2317263, 33138: 2326317, 33142: 2326373, 33149: 2326567}
[2026-01-29 23:45:43] 2026-01-30 04:45:03,908 | INFO     | --------------------------------------------------
[2026-01-29 23:45:43] 2026-01-30 04:45:03,908 | INFO     | 
[2026-01-29 23:45:43] 2026-01-30 04:45:03,908 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-29 23:45:43] 2026-01-30 04:45:04,147 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,148 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,148 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,148 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,177 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,177 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,178 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 23:45:43] 2026-01-30 04:45:04,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,178 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 23:45:43] 2026-01-30 04:45:04,178 | INFO     | job 6990486742 has completed (purged errors)
[2026-01-29 23:45:43] 2026-01-30 04:45:04,179 | INFO     | overall cleanup function is called
[2026-01-29 23:45:43] 2026-01-30 04:45:05,212 | INFO     | --- collectZombieJob: --- 10, [1274579]
[2026-01-29 23:45:43] 2026-01-30 04:45:05,213 | INFO     | zombie collector waiting for pid 1274579
[2026-01-29 23:45:43] 2026-01-30 04:45:05,213 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 23:45:43] 2026-01-30 04:45:05,213 | INFO     | collected zombie processes
[2026-01-29 23:45:43] 2026-01-30 04:45:05,213 | INFO     | will attempt to kill all subprocesses of pid=1274579
[2026-01-29 23:45:43] 2026-01-30 04:45:07,914 | INFO     | process IDs to be killed: [1274579] (in reverse order)
[2026-01-29 23:45:43] 2026-01-30 04:45:08,970 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 23:45:43] 2026-01-30 04:45:08,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 23:45:43] 2026-01-30 04:45:09,182 | INFO     | did not find any defunct processes belonging to 1274579
[2026-01-29 23:45:43] 2026-01-30 04:45:09,331 | INFO     | did not find any defunct processes belonging to 1274579
[2026-01-29 23:45:43] 2026-01-30 04:45:09,332 | INFO     | ready for new job
[2026-01-29 23:45:43] 2026-01-30 04:45:09,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 23:45:43] 2026-01-30 04:45:09,386 | INFO     | **************************************
[2026-01-29 23:45:43] 2026-01-30 04:45:09,386 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 23:45:43] 2026-01-30 04:45:09,387 | INFO     | **************************************
[2026-01-29 23:45:43] 2026-01-30 04:45:09,387 | INFO     | 
[2026-01-29 23:45:43] 2026-01-30 04:45:09,435 | INFO     | architecture information:
[2026-01-29 23:45:43] 2026-01-30 04:45:09,447 | INFO     | executing command: cat /etc/os-release
[2026-01-29 23:45:43] 2026-01-30 04:45:09,659 | INFO     | cat /etc/os-release:
[2026-01-29 23:45:43] NAME="CentOS Linux"
[2026-01-29 23:45:43] VERSION="7 (Core)"
[2026-01-29 23:45:43] ID="centos"
[2026-01-29 23:45:43] ID_LIKE="rhel fedora"
[2026-01-29 23:45:43] VERSION_ID="7"
[2026-01-29 23:45:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 23:45:43] ANSI_COLOR="0;31"
[2026-01-29 23:45:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 23:45:43] HOME_URL="https://www.centos.org/"
[2026-01-29 23:45:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 23:45:43] 
[2026-01-29 23:45:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 23:45:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 23:45:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 23:45:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 23:45:43] 
[2026-01-29 23:45:43] 2026-01-30 04:45:09,659 | INFO     | **************************************
[2026-01-29 23:45:43] 2026-01-30 04:45:10,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-29 23:45:43] 2026-01-30 04:45:10,588 | INFO     | sufficient remaining disk space (82458968064 B)
[2026-01-29 23:45:43] 2026-01-30 04:45:10,589 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 23:45:43] 2026-01-30 04:45:10,589 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 23:45:43] 2026-01-30 04:45:10,589 | INFO     | update_server=False
[2026-01-29 23:45:43] 2026-01-30 04:45:10,589 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 23:45:43] 2026-01-30 04:45:10,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 23:45:43] 2026-01-30 04:45:10,591 | INFO     | aborting loop
[2026-01-29 23:45:43] 2026-01-30 04:45:10,896 | INFO     | all payload control threads have been joined
[2026-01-29 23:45:43] 2026-01-30 04:45:10,994 | INFO     | all data control threads have been joined
[2026-01-29 23:45:43] 2026-01-30 04:45:11,150 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 23:45:43] 2026-01-30 04:45:11,596 | INFO     | [job] retrieve thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:11,601 | INFO     | [job] job monitor thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:11,852 | INFO     | all job control threads have been joined
[2026-01-29 23:45:43] 2026-01-30 04:45:11,903 | INFO     | [payload] control thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:12,002 | INFO     | [data] control thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:12,008 | INFO     | [job] validate thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:12,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 23:45:43] 2026-01-30 04:45:12,088 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:12,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 23:45:43] 2026-01-30 04:45:12,797 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:12,806 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:12,811 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:12,837 | INFO     | [data] copytool_in thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:12,859 | INFO     | [job] control thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:13,042 | INFO     | [payload] validate_post thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:13,048 | INFO     | [payload] failed_post thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:13,185 | INFO     | [data] copytool_out thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:13,427 | INFO     | [job] queue monitor thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:16,097 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 23:45:43] 2026-01-30 04:45:27,400 | INFO     | [monitor] cgroup control has ended
[2026-01-29 23:45:43] 2026-01-30 04:45:27,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140642491967296)>', '<ExcThread(monitor, started 140642109871872)>']
[2026-01-29 23:45:43] 2026-01-30 04:45:32,534 | INFO     | all workflow threads have been joined
[2026-01-29 23:45:43] 2026-01-30 04:45:32,535 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 23:45:43] 2026-01-30 04:45:32,536 | INFO     | traces error code: 0
[2026-01-29 23:45:43] 2026-01-30 04:45:32,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 23:45:43] 2026-01-30 04:45:39,055 | INFO     | PID=1267766 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-29 23:45:43] 2026-01-30 04:45:39,056 | INFO     | .. there are 12 such processes running
[2026-01-29 23:45:43] 2026-01-30 04:45:39,057 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 23:45:43] 2026-01-30 04:45:39,057 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 23:45:43] 2026-01-30 04:45:39,057 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 23:45:43] 2026-01-30 04:45:39,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 23:45:43] 2026-01-30 04:45:39,058 | CRITICAL | thread 'MainThread' is not alive
[2026-01-29 23:45:43] 2026-01-30 04:45:39,058 | INFO     | [monitor] control thread has ended
[2026-01-29 23:45:43] 2026-01-30 04:45:40,319 [wrapper] ==== pilot stdout END ====
[2026-01-29 23:45:43] 2026-01-30 04:45:40,377 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 23:45:43] 2026-01-30 04:45:40,419 [wrapper] pilotpid: 1267766
[2026-01-29 23:45:43] 2026-01-30 04:45:40,444 [wrapper] Pilot exit status: 0
[2026-01-29 23:45:43] 2026-01-30 04:45:40,642 [wrapper] pandaids: 6990486742 6990486742
[2026-01-29 23:45:43] 2026-01-30 04:45:41,555 [wrapper] cleanup supervisor_pilot 1887069 1267767
[2026-01-29 23:45:43] 2026-01-30 04:45:41,630 [wrapper] Test setup, not cleaning
[2026-01-29 23:45:43] 2026-01-30 04:45:41,668 [wrapper] apfmon messages muted
[2026-01-29 23:45:43] 2026-01-30 04:45:41,706 [wrapper] ==== wrapper stdout END ====
[2026-01-29 23:45:43] 2026-01-30 04:45:41,765 [wrapper] ==== wrapper stderr END ====
[2026-01-29 23:45:43]  *** Error codes and diagnostics ***
[2026-01-29 23:45:43]     "exeErrorCode": 0,
[2026-01-29 23:45:43]     "exeErrorDiag": "",
[2026-01-29 23:45:43]     "pilotErrorCode": 0,
[2026-01-29 23:45:43]     "pilotErrorDiag": "",
[2026-01-29 23:45:43]  *** Listing of results directory ***
[2026-01-29 23:45:43] total 1265524
[2026-01-29 23:45:43] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas    584422 Jan 28 17:30 pilot3.tar.gz
[2026-01-29 23:45:43] -rwx------. 1 boincer umatlas     36322 Jan 28 17:32 runpilot2-wrapper.sh
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas      5111 Jan 28 17:33 queuedata.json
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas       100 Jan 29 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 23:45:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 29 00:01 run_atlas
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas       105 Jan 29 00:01 job.xml
[2026-01-29 23:45:43] -rw-r--r--. 3 boincer umatlas 540979139 Jan 29 00:01 EVNT.48317969._000013.pool.root.1
[2026-01-29 23:45:43] -rw-r--r--. 3 boincer umatlas 540979139 Jan 29 00:01 ATLAS.root_0
[2026-01-29 23:45:43] -rw-r--r--. 2 boincer umatlas     15845 Jan 29 00:01 start_atlas.sh
[2026-01-29 23:45:43] drwxrwx--x. 2 boincer umatlas      4096 Jan 29 00:01 shared
[2026-01-29 23:45:43] -rw-r--r--. 2 boincer umatlas    597767 Jan 29 00:01 input.tar.gz
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas         0 Jan 29 00:01 boinc_lockfile
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas      2513 Jan 29 14:31 pandaJob.out
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas        57 Jan 29 14:31 setup.sh.local
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas   1009660 Jan 29 14:32 agis_schedconf.cvmfs.json
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas       425 Jan 29 14:32 workernode_map.json
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas      6911 Jan 29 23:39 init_data.xml
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas 200419137 Jan 29 23:42 HITS.48317971._003408.pool.root.1
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas       533 Jan 29 23:42 boinc_task_state.xml
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas      1030 Jan 29 23:44 memory_monitor_summary.json
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas   1511668 Jan 29 23:44 agis_ddmendpoints.agis.ALL.json
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas    730256 Jan 29 23:44 log.48317971._003408.job.log.tgz.1
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas      6325 Jan 29 23:45 heartbeat.json
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas        96 Jan 29 23:45 pilot_heartbeat.json
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas       893 Jan 29 23:45 pilotlog.txt
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas      8192 Jan 29 23:45 boinc_mmap_file
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas   4058461 Jan 29 23:45 log.48317971._003408.job.log.1
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas        29 Jan 29 23:45 wrapper_checkpoint.txt
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas       357 Jan 29 23:45 output.list
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas       620 Jan 29 23:45 runtime_log
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas   4802560 Jan 29 23:45 result.tar.gz
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas       787 Jan 29 23:45 SIEMDmjGT58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjOHKDmvfkwNn.diag
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas      9427 Jan 29 23:45 runtime_log.err
[2026-01-29 23:45:43] -rw-r--r--. 1 boincer umatlas     23442 Jan 29 23:45 stderr.txt
[2026-01-29 23:45:43] HITS file was successfully produced:
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas 200419137 Jan 29 23:42 shared/HITS.pool.root.1
[2026-01-29 23:45:43]  *** Contents of shared directory: ***
[2026-01-29 23:45:43] total 729324
[2026-01-29 23:45:43] -rw-r--r--. 3 boincer umatlas 540979139 Jan 29 00:01 ATLAS.root_0
[2026-01-29 23:45:43] -rw-r--r--. 2 boincer umatlas     15845 Jan 29 00:01 start_atlas.sh
[2026-01-29 23:45:43] -rw-r--r--. 2 boincer umatlas    597767 Jan 29 00:01 input.tar.gz
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas 200419137 Jan 29 23:42 HITS.pool.root.1
[2026-01-29 23:45:43] -rw-------. 1 boincer umatlas   4802560 Jan 29 23:45 result.tar.gz
23:45:44 (1257158): run_atlas exited; CPU time 114339.262549
23:45:44 (1257158): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN