Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-29 09:21:27 (89180): vboxwrapper version 26210
2026-01-29 09:21:27 (89180): BOINC client version: 8.2.4
2026-01-29 09:21:27 (89180): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-01-29 09:21:28 (89180): Successfully copied 'init_data.xml' to the shared directory.
2026-01-29 09:21:28 (89180): Create VM. (boinc_be0e5e057398158c, slot#4)
2026-01-29 09:21:29 (89180): Setting Memory Size for VM. (4200MB)
2026-01-29 09:21:29 (89180): Setting CPU Count for VM. (2)
2026-01-29 09:21:29 (89180): Setting Chipset Options for VM.
2026-01-29 09:21:29 (89180): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-29 09:21:30 (89180): Setting Boot Options for VM.
2026-01-29 09:21:30 (89180): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-29 09:21:30 (89180): Enabling VM Network Access.
2026-01-29 09:21:31 (89180): Disabling USB Support for VM.
2026-01-29 09:21:31 (89180): Disabling COM Port Support for VM.
2026-01-29 09:21:31 (89180): Disabling LPT Port Support for VM.
2026-01-29 09:21:31 (89180): Disabling Audio Support for VM.
2026-01-29 09:21:32 (89180): Disabling Clipboard Support for VM.
2026-01-29 09:21:32 (89180): Disabling Drag and Drop Support for VM.
2026-01-29 09:21:32 (89180): Adding storage controller(s) to VM.
2026-01-29 09:21:33 (89180): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-29 09:21:33 (89180): Adding VirtualBox Guest Additions to VM.
2026-01-29 09:21:33 (89180): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-29 09:21:34 (89180): forwarding host port 49294 to guest port 80
2026-01-29 09:21:34 (89180): Enabling remote desktop for VM.
2026-01-29 09:21:34 (89180): Required extension pack not installed, remote desktop not enabled.
2026-01-29 09:21:34 (89180): Enabling shared directory for VM.
2026-01-29 09:21:35 (89180): Starting VM using VBoxManage interface. (boinc_be0e5e057398158c, slot#4)
2026-01-29 09:21:41 (89180): Successfully started VM. (PID = '90836')
2026-01-29 09:21:41 (89180): Reporting VM Process ID to BOINC.
2026-01-29 09:21:41 (89180): Guest Log: BIOS: VirtualBox 7.0.6
2026-01-29 09:21:41 (89180): Guest Log: CPUID EDX: 0x178bfbff
2026-01-29 09:21:41 (89180): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-29 09:21:41 (89180): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-29 09:21:41 (89180): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-29 09:21:41 (89180): Detected: Web Application Enabled (http://localhost:49294)
2026-01-29 09:21:41 (89180): Preference change detected
2026-01-29 09:21:41 (89180): Setting CPU throttle for VM. (100%)
2026-01-29 09:21:41 (89180): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-29 09:21:43 (89180): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-29 09:21:43 (89180): Guest Log: BIOS: Booting from Hard Disk...
2026-01-29 09:21:45 (89180): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-29 09:21:45 (89180): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-29 09:21:45 (89180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-29 09:21:51 (89180): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-29 09:21:51 (89180): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-29 09:21:56 (89180): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-29 09:21:56 (89180): Guest Log: 00:00:00.000105 main     Log opened 2026-01-29T09:21:54.059846000Z
2026-01-29 09:21:56 (89180): Guest Log: 00:00:00.000180 main     OS Product: Linux
2026-01-29 09:21:56 (89180): Guest Log: 00:00:00.000240 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-29 09:21:56 (89180): Guest Log: 00:00:00.000281 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-29 09:21:56 (89180): Guest Log: 00:00:00.000322 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-29 09:21:56 (89180): Guest Log: 00:00:00.000323 main     Process ID: 1268
2026-01-29 09:21:56 (89180): Guest Log: 00:00:00.000324 main     Package type: LINUX_64BITS_GENERIC
2026-01-29 09:21:56 (89180): Guest Log: 00:00:00.001262 main     5.2.32 r132073 started. Verbose level = 0
2026-01-29 09:21:56 (89180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-29 09:21:56 (89180): Guest Log: [INFO] Mounting shared directory
2026-01-29 09:21:56 (89180): Guest Log: [INFO] Checking for init_data.xml
2026-01-29 09:22:06 (89180): Guest Log: 00:00:10.003340 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 541 116 000ns (GuestNow=1 769 696 525 604 081 000 ns GuestLast=1 769 678 514 062 965 000 ns fSetTimeLastLoop=true )
2026-01-29 09:22:55 (89180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-29 09:22:55 (89180): Guest Log: [INFO] Detected branch: prod
2026-01-29 09:22:56 (89180): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-29 09:22:56 (89180): Guest Log: Copying input files
2026-01-29 09:22:58 (89180): Guest Log: Copied input files into RunAtlas.
2026-01-29 09:22:58 (89180): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-29 09:22:58 (89180): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-29 09:22:58 (89180): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-29 09:22:58 (89180): Guest Log: Further information can be found at the LHC@home message board.
2026-01-29 09:23:06 (89180): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-29 09:23:06 (89180): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-29 09:23:06 (89180): Guest Log: 2.6.3.0 1569 0 30064 155643 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-29 09:23:07 (89180): Guest Log: copied the webapp to /var/www
2026-01-29 09:23:07 (89180): Guest Log: ATHENA_PROC_NUMBER=2
2026-01-29 09:23:07 (89180): Guest Log: ATHENA_CORE_NUMBER=2
2026-01-29 09:23:07 (89180): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-29 09:23:07 (89180): Guest Log:  *** Starting ATLAS job. (PandaID=6986149291 taskID=48317931) ***
2026-01-29 11:01:46 (89180): Status Report: Elapsed Time: '6000.000000'
2026-01-29 11:01:46 (89180): Status Report: CPU Time: '11268.937500'
2026-01-29 12:41:51 (89180): Status Report: Elapsed Time: '12000.000000'
2026-01-29 12:41:51 (89180): Status Report: CPU Time: '23231.171875'
2026-01-29 14:21:56 (89180): Status Report: Elapsed Time: '18000.000000'
2026-01-29 14:21:56 (89180): Status Report: CPU Time: '35194.984375'
2026-01-29 14:43:40 (89180): Guest Log:  *** Job finished ***
2026-01-29 14:43:40 (89180): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:11,311 | INFO     | [data] copytool_out thread has finished
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:12,346 | INFO     | [data] queue_monitor thread has finished
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:34,782 | INFO     | [monitor] cgroup control has ended
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:34,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631484385088)>', '<ExcThread(monitor, started 139630888331008)>']
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:35,382 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:35,382 | INFO     | [monitor] control thread has ended
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:39,848 | INFO     | all workflow threads have been joined
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:39,848 | INFO     | end of generic workflow (traces error code: 0)
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:39,848 | INFO     | traces error code: 0
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:39,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:39,912 [wrapper] ==== pilot stdout END ====
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:39,915 [wrapper] ==== wrapper stdout RESUME ====
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:39,918 [wrapper] pilotpid: 5945
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:39,921 [wrapper] Pilot exit status: 0
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:40,018 [wrapper] pandaids: 6986149291
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:40,040 [wrapper] cleanup supervisor_pilot 29653 5946
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:40,046 [wrapper] Test setup, not cleaning
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:40,049 [wrapper] apfmon messages muted
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:40,052 [wrapper] ==== wrapper stdout END ====
2026-01-29 14:43:40 (89180): Guest Log: 2026-01-29 19:43:40,055 [wrapper] ==== wrapper stderr END ====
2026-01-29 14:43:40 (89180): Guest Log:  *** Error codes and diagnostics ***
2026-01-29 14:43:40 (89180): Guest Log:     "exeErrorCode": 0,
2026-01-29 14:43:40 (89180): Guest Log:     "exeErrorDiag": "",
2026-01-29 14:43:40 (89180): Guest Log:     "pilotErrorCode": 0,
2026-01-29 14:43:40 (89180): Guest Log:     "pilotErrorDiag": "",
2026-01-29 14:43:40 (89180): Guest Log:  *** Listing of results directory ***
2026-01-29 14:43:40 (89180): Guest Log: total 191620
2026-01-29 14:43:40 (89180): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 28 17:04 pilot3.tar.gz
2026-01-29 14:43:40 (89180): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 28 17:04 queuedata.json
2026-01-29 14:43:40 (89180): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 28 17:04 runpilot2-wrapper.sh
2026-01-29 14:43:40 (89180): Guest Log: -rwxr-xr-x. 1 atlas atlas      8831 Jan 29 14:22 init_data.xml
2026-01-29 14:43:40 (89180): Guest Log: -rwxr-xr-x. 1 atlas atlas    597755 Jan 29 14:22 input.tar.gz
2026-01-29 14:43:40 (89180): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 29 14:22 start_atlas.sh
2026-01-29 14:43:40 (89180): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 29 14:22 EVNT.48317929._000035.pool.root.1 -> /data/./ATLAS.root_0
2026-01-29 14:43:40 (89180): Guest Log: -rw-r--r--. 1 atlas atlas      2507 Jan 29 14:23 pandaJob.out
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas   1010005 Jan 29 14:24 agis_schedconf.cvmfs.json
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas       429 Jan 29 14:24 workernode_map.json
2026-01-29 14:43:40 (89180): Guest Log: drwx------. 5 atlas atlas      4096 Jan 29 14:24 pilot3
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas 186116850 Jan 29 19:42 HITS.48317931._004550.pool.root.1
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas      1032 Jan 29 19:42 memory_monitor_summary.json
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas   1511668 Jan 29 19:43 agis_ddmendpoints.agis.ALL.json
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas    442198 Jan 29 19:43 log.48317931._004550.job.log.tgz.1
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas        95 Jan 29 19:43 pilot_heartbeat.json
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas      6379 Jan 29 19:43 heartbeat.json
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas      4608 Jan 29 19:43 pilotlog.txt
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas   2671139 Jan 29 19:43 log.48317931._004550.job.log.1
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas       357 Jan 29 19:43 output.list
2026-01-29 14:43:40 (89180): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 29 19:43 runtime_log
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas   3133440 Jan 29 19:43 result.tar.gz
2026-01-29 14:43:40 (89180): Guest Log: -rw-r--r--. 1 atlas atlas      8764 Jan 29 19:43 runtime_log.err
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas       662 Jan 29 19:43 MFfLDmA9N58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhbGKDm9ZZSmm.diag
2026-01-29 14:43:40 (89180): Guest Log: Looking for outputfile HITS.48317931._004550.pool.root.1
2026-01-29 14:43:40 (89180): Guest Log: HITS file was successfully produced
2026-01-29 14:43:40 (89180): Guest Log: -rw-------. 1 atlas atlas 186116850 Jan 29 19:42 /home/atlas/RunAtlas/HITS.48317931._004550.pool.root.1
2026-01-29 14:43:41 (89180): Guest Log: Successfully finished the ATLAS job!
2026-01-29 14:43:41 (89180): Guest Log: Copying the results back to the shared directory!
2026-01-29 14:43:41 (89180): Guest Log:  *** Contents of shared directory: ***
2026-01-29 14:43:42 (89180): Guest Log: total 667232
2026-01-29 14:43:42 (89180): Guest Log: -rwxrwxrwx. 1 root root 493365676 Jan 29 14:21 ATLAS.root_0
2026-01-29 14:43:42 (89180): Guest Log: -rwxrwxrwx. 1 root root 186116850 Jan 29 19:43 HITS.pool.root.1
2026-01-29 14:43:42 (89180): Guest Log: -rwxrwxrwx. 1 root root      8831 Jan 29 14:21 init_data.xml
2026-01-29 14:43:42 (89180): Guest Log: -rwxrwxrwx. 1 root root    597755 Jan 29 04:23 input.tar.gz
2026-01-29 14:43:42 (89180): Guest Log: -rwxrwxrwx. 1 root root   3133440 Jan 29 19:43 result.tar.gz
2026-01-29 14:43:42 (89180): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 29 04:23 start_atlas.sh
2026-01-29 14:43:42 (89180): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-29 14:43:42 (89180): VM Completion File Detected.
2026-01-29 14:43:42 (89180): Powering off VM.
2026-01-29 14:43:42 (89180): Successfully stopped VM.
2026-01-29 14:43:42 (89180): Deregistering VM. (boinc_be0e5e057398158c, slot#4)
2026-01-29 14:43:43 (89180): Removing network bandwidth throttle group from VM.
2026-01-29 14:43:43 (89180): Removing VM from VirtualBox.
2026-01-29 14:43:48 (89180): called boinc_finish(0)

</stderr_txt>
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