Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:45 (4012039): wrapper (7.7.26015): starting
00:02:45 (4012039): wrapper: running run_atlas (--nthreads 12)
[2026-01-29 00:02:45] Arguments: --nthreads 12
[2026-01-29 00:02:45] Threads: 12
[2026-01-29 00:02:45] Checking for CVMFS
[2026-01-29 00:02:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 00:02:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 00:02:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 00:02:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 00:02:46] 2.13.3.0 7100 121701 318632 155626 1 1373 21948238 40960000 56359 16776704 0 1388736057 99.718 990454889 49068 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-29 00:02:46] CVMFS is ok
[2026-01-29 00:02:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 00:02:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 00:02:46] Further information can be found at the LHC@home message board.
[2026-01-29 00:02:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 00:02:46] Checking for apptainer binary...
[2026-01-29 00:02:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 00:02:46] Running /usr/bin/apptainer --version
[2026-01-29 00:02:46] apptainer version 1.4.5-2.el9
[2026-01-29 00:02:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 00:02:47] c8-6-10.aglt2.org
[2026-01-29 00:02:47] apptainer works
[2026-01-29 00:02:48] Set ATHENA_PROC_NUMBER=12
[2026-01-29 00:02:48] Set ATHENA_CORE_NUMBER=12
[2026-01-29 00:02:48] Starting ATLAS job with PandaID=6986149184
[2026-01-29 00:02:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 02:01:54]  *** The last 200 lines of the pilot log: ***
[2026-01-29 02:01:54] 2026-01-29 07:01:00,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 02:01:54] 2026-01-29 07:01:00,604 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 02:01:54] 2026-01-29 07:01:00,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 02:01:54] 2026-01-29 07:01:00,605 | INFO     | fitting pss+swap vs Time
[2026-01-29 02:01:54] 2026-01-29 07:01:00,605 | INFO     | sum of square deviations: 447488310.8672565
[2026-01-29 02:01:54] 2026-01-29 07:01:00,606 | INFO     | sum of deviations: 23856915757.097336
[2026-01-29 02:01:54] 2026-01-29 07:01:00,606 | INFO     | mean x: 1769666595.6106195
[2026-01-29 02:01:54] 2026-01-29 07:01:00,706 | INFO     | mean y: 2602426.7522123894
[2026-01-29 02:01:54] 2026-01-29 07:01:00,706 | INFO     | intersect: -94343519839.12216
[2026-01-29 02:01:54] 2026-01-29 07:01:00,707 | INFO     | chi2: 3.3778458013469628
[2026-01-29 02:01:54] 2026-01-29 07:01:00,707 | INFO     | sum of square deviations: 390687974.6666671
[2026-01-29 02:01:54] 2026-01-29 07:01:00,707 | INFO     | sum of deviations: 30810303464.333344
[2026-01-29 02:01:54] 2026-01-29 07:01:00,707 | INFO     | mean x: 1769666443.1111112
[2026-01-29 02:01:54] 2026-01-29 07:01:00,707 | INFO     | mean y: 2620290.222222222
[2026-01-29 02:01:54] 2026-01-29 07:01:00,707 | INFO     | intersect: -139556218676.91077
[2026-01-29 02:01:54] 2026-01-29 07:01:00,707 | INFO     | chi2: 2.5604672559556003
[2026-01-29 02:01:54] 2026-01-29 07:01:00,707 | INFO     | current chi2=2.5604672559556003 (change=24.198219618711473 %)
[2026-01-29 02:01:54] 2026-01-29 07:01:00,707 | INFO     | right removable region: 107
[2026-01-29 02:01:54] 2026-01-29 07:01:00,708 | INFO     | sum of square deviations: 390666198.9166671
[2026-01-29 02:01:54] 2026-01-29 07:01:00,708 | INFO     | sum of deviations: -3438605822.0277767
[2026-01-29 02:01:54] 2026-01-29 07:01:00,708 | INFO     | mean x: 1769666748.1388888
[2026-01-29 02:01:54] 2026-01-29 07:01:00,708 | INFO     | mean y: 2674779.2685185187
[2026-01-29 02:01:54] 2026-01-29 07:01:00,708 | INFO     | intersect: 15579109085.778296
[2026-01-29 02:01:54] 2026-01-29 07:01:00,708 | INFO     | chi2: 0.9162590712681621
[2026-01-29 02:01:54] 2026-01-29 07:01:00,708 | INFO     | current chi2=0.9162590712681621 (change=72.874455343616 %)
[2026-01-29 02:01:54] 2026-01-29 07:01:00,708 | INFO     | sum of square deviations: 338867436.7766997
[2026-01-29 02:01:54] 2026-01-29 07:01:00,708 | INFO     | sum of deviations: -5468863371.854368
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | mean x: 1769666900.6699028
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | mean y: 2680565.5631067962
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | intersect: 28562717450.52983
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | chi2: 0.8811998014260649
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | current chi2=0.8811998014260649 (change=3.826349003407177 %)
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | left removable region: 20
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | sum of square deviations: 204199070.4367814
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | sum of deviations: 1415189429.5172415
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | mean x: 1769667022.7471263
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | mean y: 2706712.0689655175
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | intersect: -12261864615.312908
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | chi2: 0.0002734017738298453
[2026-01-29 02:01:54] 2026-01-29 07:01:00,709 | INFO     | current memory leak: 6.93 B/s (using 87 data points, chi2=0.00)
[2026-01-29 02:01:54] 2026-01-29 07:01:00,817 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-01-29 02:01:54] 2026-01-29 07:01:00,817 | INFO     | ..............................
[2026-01-29 02:01:54] 2026-01-29 07:01:00,817 | INFO     | . Timing measurements:
[2026-01-29 02:01:54] 2026-01-29 07:01:00,817 | INFO     | . get job = 0 s
[2026-01-29 02:01:54] 2026-01-29 07:01:00,818 | INFO     | . initial setup = 34 s
[2026-01-29 02:01:54] 2026-01-29 07:01:00,818 | INFO     | . payload setup = 42 s
[2026-01-29 02:01:54] 2026-01-29 07:01:00,818 | INFO     | . stage-in = 0 s
[2026-01-29 02:01:54] 2026-01-29 07:01:00,818 | INFO     | . payload execution = 6923 s
[2026-01-29 02:01:54] 2026-01-29 07:01:00,818 | INFO     | . stage-out = 2 s
[2026-01-29 02:01:54] 2026-01-29 07:01:00,818 | INFO     | . log creation = 0 s
[2026-01-29 02:01:54] 2026-01-29 07:01:00,818 | INFO     | ..............................
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | 
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | job summary report
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | --------------------------------------------------
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | PanDA job id: 6986149184
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | task id: 48317931
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | errors: (none)
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | pilot state: finished 
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | transexitcode: 0
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | exeerrorcode: 0
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | exeerrordiag: 
[2026-01-29 02:01:54] 2026-01-29 07:01:01,074 | INFO     | exitcode: 0
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | exitmsg: OK
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | cpuconsumptiontime: 22861 s
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | nevents: 400
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | neventsw: 0
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | pid: 4057230
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | pgrp: 4057230
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | corecount: 12
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | event service: False
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | sizes: {0: 2283084, 1: 2284142, 2: 2284230, 12: 2284230, 6969: 2311361, 6972: 2320543, 6973: 2320681}
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | --------------------------------------------------
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | 
[2026-01-29 02:01:54] 2026-01-29 07:01:01,075 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-29 02:01:54] 2026-01-29 07:01:01,189 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,189 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,189 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,189 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | job 6986149184 has completed (purged errors)
[2026-01-29 02:01:54] 2026-01-29 07:01:01,190 | INFO     | overall cleanup function is called
[2026-01-29 02:01:54] 2026-01-29 07:01:01,416 | WARNING  | process 4057230 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 02:01:54] 2026-01-29 07:01:02,145 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 02:01:54] 2026-01-29 07:01:02,145 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 02:01:54] 2026-01-29 07:01:02,145 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-29 02:01:54] 2026-01-29 07:01:02,146 | WARNING  | maxPSS not found in memory monitor output
[2026-01-29 02:01:54] 2026-01-29 07:01:02,163 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/2/PanDA_Pilot-6986149184/payload.stdout) since it has not been created yet
[2026-01-29 02:01:54] 2026-01-29 07:01:02,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-29 02:01:54] 2026-01-29 07:01:02,198 | INFO     | --- collectZombieJob: --- 10, [4057230]
[2026-01-29 02:01:54] 2026-01-29 07:01:02,198 | INFO     | zombie collector waiting for pid 4057230
[2026-01-29 02:01:54] 2026-01-29 07:01:02,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 02:01:54] 2026-01-29 07:01:02,199 | INFO     | collected zombie processes
[2026-01-29 02:01:54] 2026-01-29 07:01:02,199 | INFO     | will attempt to kill all subprocesses of pid=4057230
[2026-01-29 02:01:54] 2026-01-29 07:01:02,289 | INFO     | sufficient remaining disk space (162197929984 B)
[2026-01-29 02:01:54] 2026-01-29 07:01:02,289 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-29 02:01:54] 2026-01-29 07:01:02,289 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6986149184/HITS.48317931._004443.pool.root.1 since it does not exist
[2026-01-29 02:01:54] 2026-01-29 07:01:04,173 | INFO     | process IDs to be killed: [4057230] (in reverse order)
[2026-01-29 02:01:54] 2026-01-29 07:01:04,317 | INFO     | number of running child processes to parent process 4057230: 1
[2026-01-29 02:01:54] 2026-01-29 07:01:04,318 | INFO     | maximum number of monitored processes: 6
[2026-01-29 02:01:54] 2026-01-29 07:01:04,318 | INFO     | aborting job monitoring since job object (job id=6986149184) has expired
[2026-01-29 02:01:54] 2026-01-29 07:01:04,559 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 02:01:54] 2026-01-29 07:01:04,559 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 02:01:54] 2026-01-29 07:01:04,636 | INFO     | did not find any defunct processes belonging to 4057230
[2026-01-29 02:01:54] 2026-01-29 07:01:04,695 | INFO     | did not find any defunct processes belonging to 4057230
[2026-01-29 02:01:54] 2026-01-29 07:01:04,695 | INFO     | ready for new job
[2026-01-29 02:01:54] 2026-01-29 07:01:04,695 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 02:01:54] 2026-01-29 07:01:04,701 | INFO     | **************************************
[2026-01-29 02:01:54] 2026-01-29 07:01:04,701 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 02:01:54] 2026-01-29 07:01:04,701 | INFO     | **************************************
[2026-01-29 02:01:54] 2026-01-29 07:01:04,701 | INFO     | 
[2026-01-29 02:01:54] 2026-01-29 07:01:04,709 | INFO     | architecture information:
[2026-01-29 02:01:54] 2026-01-29 07:01:04,713 | INFO     | executing command: cat /etc/os-release
[2026-01-29 02:01:54] 2026-01-29 07:01:04,779 | INFO     | cat /etc/os-release:
[2026-01-29 02:01:54] NAME="CentOS Linux"
[2026-01-29 02:01:54] VERSION="7 (Core)"
[2026-01-29 02:01:54] ID="centos"
[2026-01-29 02:01:54] ID_LIKE="rhel fedora"
[2026-01-29 02:01:54] VERSION_ID="7"
[2026-01-29 02:01:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 02:01:54] ANSI_COLOR="0;31"
[2026-01-29 02:01:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 02:01:54] HOME_URL="https://www.centos.org/"
[2026-01-29 02:01:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 02:01:54] 
[2026-01-29 02:01:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 02:01:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 02:01:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 02:01:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 02:01:54] 
[2026-01-29 02:01:54] 2026-01-29 07:01:04,779 | INFO     | **************************************
[2026-01-29 02:01:54] 2026-01-29 07:01:05,285 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-29 02:01:54] 2026-01-29 07:01:05,457 | INFO     | sufficient remaining disk space (162198978560 B)
[2026-01-29 02:01:54] 2026-01-29 07:01:05,461 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 02:01:54] 2026-01-29 07:01:05,461 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 02:01:54] 2026-01-29 07:01:05,461 | INFO     | update_server=False
[2026-01-29 02:01:54] 2026-01-29 07:01:05,461 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 02:01:54] 2026-01-29 07:01:05,461 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 02:01:54] 2026-01-29 07:01:05,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 02:01:54] 2026-01-29 07:01:05,461 | INFO     | aborting loop
[2026-01-29 02:01:54] 2026-01-29 07:01:05,551 | INFO     | all data control threads have been joined
[2026-01-29 02:01:54] 2026-01-29 07:01:05,669 | INFO     | all payload control threads have been joined
[2026-01-29 02:01:54] 2026-01-29 07:01:06,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 02:01:54] 2026-01-29 07:01:06,166 | INFO     | all job control threads have been joined
[2026-01-29 02:01:54] 2026-01-29 07:01:06,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 02:01:54] 2026-01-29 07:01:06,470 | INFO     | [job] retrieve thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:06,470 | INFO     | [job] job monitor thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:06,521 | INFO     | [job] validate thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:06,578 | INFO     | [data] control thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:06,675 | INFO     | [payload] control thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:06,899 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:07,103 | INFO     | [job] queue monitor thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:07,128 | INFO     | [data] copytool_in thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:07,132 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:07,172 | INFO     | [job] control thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:07,360 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:07,476 | INFO     | [data] copytool_out thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:07,636 | INFO     | [payload] validate_post thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:08,050 | INFO     | [payload] failed_post thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:10,434 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:16,358 | INFO     | job.realtimelogging is not enabled
[2026-01-29 02:01:54] 2026-01-29 07:01:17,364 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 02:01:54] 2026-01-29 07:01:35,247 | INFO     | PID=4026747 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-29 02:01:54] 2026-01-29 07:01:35,248 | INFO     | .. there are 67 such processes running
[2026-01-29 02:01:54] 2026-01-29 07:01:35,248 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 02:01:54] 2026-01-29 07:01:35,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 02:01:54] 2026-01-29 07:01:35,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 02:01:54] 2026-01-29 07:01:46,561 | INFO     | [monitor] cgroup control has ended
[2026-01-29 02:01:54] 2026-01-29 07:01:47,273 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333456910144)>', '<ExcThread(monitor, started 140333107091200)>']
[2026-01-29 02:01:54] 2026-01-29 07:01:47,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 02:01:54] 2026-01-29 07:01:47,339 | INFO     | [monitor] control thread has ended
[2026-01-29 02:01:54] 2026-01-29 07:01:52,298 | INFO     | all workflow threads have been joined
[2026-01-29 02:01:54] 2026-01-29 07:01:52,298 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 02:01:54] 2026-01-29 07:01:52,298 | INFO     | traces error code: 0
[2026-01-29 02:01:54] 2026-01-29 07:01:52,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 02:01:54] 2026-01-29 07:01:52,555 [wrapper] ==== pilot stdout END ====
[2026-01-29 02:01:54] 2026-01-29 07:01:52,584 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 02:01:54] 2026-01-29 07:01:52,610 [wrapper] pilotpid: 4026747
[2026-01-29 02:01:54] 2026-01-29 07:01:52,632 [wrapper] Pilot exit status: 0
[2026-01-29 02:01:54] 2026-01-29 07:01:52,746 [wrapper] pandaids: 6986149184
[2026-01-29 02:01:54] 2026-01-29 07:01:53,290 [wrapper] cleanup supervisor_pilot 1051268 4026749
[2026-01-29 02:01:54] 2026-01-29 07:01:53,300 [wrapper] Test setup, not cleaning
[2026-01-29 02:01:54] 2026-01-29 07:01:53,342 [wrapper] apfmon messages muted
[2026-01-29 02:01:54] 2026-01-29 07:01:53,353 [wrapper] ==== wrapper stdout END ====
[2026-01-29 02:01:54] 2026-01-29 07:01:53,387 [wrapper] ==== wrapper stderr END ====
[2026-01-29 02:01:54]  *** Error codes and diagnostics ***
[2026-01-29 02:01:54]     "exeErrorCode": 0,
[2026-01-29 02:01:54]     "exeErrorDiag": "",
[2026-01-29 02:01:54]     "pilotErrorCode": 0,
[2026-01-29 02:01:54]     "pilotErrorDiag": "",
[2026-01-29 02:01:54]  *** Listing of results directory ***
[2026-01-29 02:01:54] total 677564
[2026-01-29 02:01:54] -rwx------. 1 boincer umatlas     36322 Jan 28 12:06 runpilot2-wrapper.sh
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas      5111 Jan 28 12:08 queuedata.json
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas    584422 Jan 28 12:08 pilot3.tar.gz
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas       100 Jan 29 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 02:01:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 29 00:02 run_atlas
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas       105 Jan 29 00:02 job.xml
[2026-01-29 02:01:54] -rw-r--r--. 2 boincer umatlas 502811776 Jan 29 00:02 EVNT.48317929._000033.pool.root.1
[2026-01-29 02:01:54] -rw-r--r--. 2 boincer umatlas     15845 Jan 29 00:02 start_atlas.sh
[2026-01-29 02:01:54] drwxrwx--x. 2 boincer umatlas      4096 Jan 29 00:02 shared
[2026-01-29 02:01:54] -rw-r--r--. 2 boincer umatlas    597748 Jan 29 00:02 input.tar.gz
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas         0 Jan 29 00:02 boinc_lockfile
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas      2507 Jan 29 00:02 pandaJob.out
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas        57 Jan 29 00:02 setup.sh.local
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas   1005755 Jan 29 00:04 agis_schedconf.cvmfs.json
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas   1516246 Jan 29 00:04 agis_ddmendpoints.agis.ALL.json
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas       423 Jan 29 00:04 workernode_map.json
[2026-01-29 02:01:54] drwx------. 5 boincer umatlas      4096 Jan 29 00:04 pilot3
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas 184524898 Jan 29 01:59 HITS.48317931._004443.pool.root.1
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas       530 Jan 29 01:59 boinc_task_state.xml
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas      7172 Jan 29 02:00 init_data.xml
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas        95 Jan 29 02:00 pilot_heartbeat.json
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas      1051 Jan 29 02:00 memory_monitor_summary.json
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas    406638 Jan 29 02:00 log.48317931._004443.job.log.tgz.1
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas      6356 Jan 29 02:01 heartbeat.json
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas        27 Jan 29 02:01 wrapper_checkpoint.txt
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas      8192 Jan 29 02:01 boinc_mmap_file
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas      4893 Jan 29 02:01 pilotlog.txt
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas    863713 Jan 29 02:01 log.48317931._004443.job.log.1
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas       357 Jan 29 02:01 output.list
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas       620 Jan 29 02:01 runtime_log
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas   1290240 Jan 29 02:01 result.tar.gz
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas      9338 Jan 29 02:01 runtime_log.err
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas       655 Jan 29 02:01 eDWKDm8AO58n9Rq4apOajLDm4fhM0noT9bVooX4SDmPeGKDmSUDm7m.diag
[2026-01-29 02:01:54] -rw-r--r--. 1 boincer umatlas     21530 Jan 29 02:01 stderr.txt
[2026-01-29 02:01:54] HITS file was successfully produced:
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas 184524898 Jan 29 01:59 shared/HITS.pool.root.1
[2026-01-29 02:01:54]  *** Contents of shared directory: ***
[2026-01-29 02:01:54] total 673100
[2026-01-29 02:01:54] -rw-r--r--. 2 boincer umatlas 502811776 Jan 29 00:02 ATLAS.root_0
[2026-01-29 02:01:54] -rw-r--r--. 2 boincer umatlas     15845 Jan 29 00:02 start_atlas.sh
[2026-01-29 02:01:54] -rw-r--r--. 2 boincer umatlas    597748 Jan 29 00:02 input.tar.gz
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas 184524898 Jan 29 01:59 HITS.pool.root.1
[2026-01-29 02:01:54] -rw-------. 1 boincer umatlas   1290240 Jan 29 02:01 result.tar.gz
02:01:56 (4012039): run_atlas exited; CPU time 23119.006314
02:01:56 (4012039): called boinc_finish(0)

</stderr_txt>
]]>

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