Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:42 (2377910): wrapper (7.7.26015): starting
00:01:42 (2377910): wrapper: running run_atlas (--nthreads 12)
[2026-01-29 00:01:42] Arguments: --nthreads 12
[2026-01-29 00:01:42] Threads: 12
[2026-01-29 00:01:42] Checking for CVMFS
[2026-01-29 00:01:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 00:01:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 00:01:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 00:01:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 00:01:45] 2.13.3.0 12204 51234 246132 155626 3 1057 28565689 40960001 46612 16776704 0 318867090 99.697 256933864 34511 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-29 00:01:45] CVMFS is ok
[2026-01-29 00:01:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 00:01:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 00:01:45] Further information can be found at the LHC@home message board.
[2026-01-29 00:01:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 00:01:45] Checking for apptainer binary...
[2026-01-29 00:01:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 00:01:45] Running /usr/bin/apptainer --version
[2026-01-29 00:01:45] apptainer version 1.4.5-2.el9
[2026-01-29 00:01:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 00:01:46] c-212-15.aglt2.org
[2026-01-29 00:01:46] apptainer works
[2026-01-29 00:01:46] Set ATHENA_PROC_NUMBER=12
[2026-01-29 00:01:46] Set ATHENA_CORE_NUMBER=12
[2026-01-29 00:01:46] Starting ATLAS job with PandaID=6987907405
[2026-01-29 00:01:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 05:23:29]  *** The last 200 lines of the pilot log: ***
[2026-01-29 05:23:29] 2026-01-29 10:22:50,093 | INFO     | job 6987907405 has finished - writing final server update
[2026-01-29 05:23:29] 2026-01-29 10:22:50,094 | INFO     | total number of processed events: 400 (read)
[2026-01-29 05:23:29] 2026-01-29 10:22:50,349 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6987907405/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 05:23:29] 2026-01-29 10:22:50,374 | INFO     | extracted standard info from prmon json
[2026-01-29 05:23:29] 2026-01-29 10:22:50,374 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 05:23:29] 2026-01-29 10:22:50,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 05:23:29] 2026-01-29 10:22:50,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 05:23:29] 2026-01-29 10:22:50,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 05:23:29] 2026-01-29 10:22:50,425 | INFO     | fitting pss+swap vs Time
[2026-01-29 05:23:29] 2026-01-29 10:22:50,430 | INFO     | sum of square deviations: 9600064291.761187
[2026-01-29 05:23:29] 2026-01-29 10:22:50,433 | INFO     | sum of deviations: 264330454216.21
[2026-01-29 05:23:29] 2026-01-29 10:22:50,433 | INFO     | mean x: 1769672584.6464968
[2026-01-29 05:23:29] 2026-01-29 10:22:50,433 | INFO     | mean y: 2609831.1910828026
[2026-01-29 05:23:29] 2026-01-29 10:22:50,433 | INFO     | intersect: -48723976147.51242
[2026-01-29 05:23:29] 2026-01-29 10:22:50,433 | INFO     | chi2: 6.736265709948238
[2026-01-29 05:23:29] 2026-01-29 10:22:50,434 | INFO     | sum of square deviations: 9148691709.01619
[2026-01-29 05:23:29] 2026-01-29 10:22:50,440 | INFO     | sum of deviations: 284690065538.1811
[2026-01-29 05:23:29] 2026-01-29 10:22:50,440 | INFO     | mean x: 1769672432.1391585
[2026-01-29 05:23:29] 2026-01-29 10:22:50,440 | INFO     | mean y: 2616609.1585760517
[2026-01-29 05:23:29] 2026-01-29 10:22:50,440 | INFO     | intersect: -55066258450.90033
[2026-01-29 05:23:29] 2026-01-29 10:22:50,440 | INFO     | chi2: 5.885782777690113
[2026-01-29 05:23:29] 2026-01-29 10:22:50,440 | INFO     | current chi2=5.885782777690113 (change=12.625436241360207 %)
[2026-01-29 05:23:29] 2026-01-29 10:22:50,441 | INFO     | right removable region: 308
[2026-01-29 05:23:29] 2026-01-29 10:22:50,441 | INFO     | sum of square deviations: 9148720869.152151
[2026-01-29 05:23:29] 2026-01-29 10:22:50,476 | INFO     | sum of deviations: 159315402473.09717
[2026-01-29 05:23:29] 2026-01-29 10:22:50,479 | INFO     | mean x: 1769672737.1488674
[2026-01-29 05:23:29] 2026-01-29 10:22:50,479 | INFO     | mean y: 2645276.5631067962
[2026-01-29 05:23:29] 2026-01-29 10:22:50,479 | INFO     | intersect: -30814353995.45288
[2026-01-29 05:23:29] 2026-01-29 10:22:50,483 | INFO     | chi2: 3.014265066183852
[2026-01-29 05:23:29] 2026-01-29 10:22:50,483 | INFO     | current chi2=3.014265066183852 (change=55.25317444452449 %)
[2026-01-29 05:23:29] 2026-01-29 10:22:50,486 | INFO     | sum of square deviations: 8711768413.3388
[2026-01-29 05:23:29] 2026-01-29 10:22:50,510 | INFO     | sum of deviations: 100587710184.99356
[2026-01-29 05:23:29] 2026-01-29 10:22:50,510 | INFO     | mean x: 1769672889.6480262
[2026-01-29 05:23:29] 2026-01-29 10:22:50,510 | INFO     | mean y: 2665725.822368421
[2026-01-29 05:23:29] 2026-01-29 10:22:50,513 | INFO     | intersect: -20430308993.019375
[2026-01-29 05:23:29] 2026-01-29 10:22:50,515 | INFO     | chi2: 1.9074514340516924
[2026-01-29 05:23:29] 2026-01-29 10:22:50,516 | INFO     | current chi2=1.9074514340516924 (change=36.71918719256559 %)
[2026-01-29 05:23:29] 2026-01-29 10:22:50,519 | INFO     | sum of square deviations: 8288937458.22741
[2026-01-29 05:23:29] 2026-01-29 10:22:50,534 | INFO     | sum of deviations: 61969881546.85266
[2026-01-29 05:23:29] 2026-01-29 10:22:50,535 | INFO     | mean x: 1769673042.1505017
[2026-01-29 05:23:29] 2026-01-29 10:22:50,535 | INFO     | mean y: 2679643.314381271
[2026-01-29 05:23:29] 2026-01-29 10:22:50,535 | INFO     | intersect: -13227777137.352072
[2026-01-29 05:23:29] 2026-01-29 10:22:50,535 | INFO     | chi2: 1.4765499924618093
[2026-01-29 05:23:29] 2026-01-29 10:22:50,535 | INFO     | current chi2=1.4765499924618093 (change=22.59042793422994 %)
[2026-01-29 05:23:29] 2026-01-29 10:22:50,535 | INFO     | left removable region: 30
[2026-01-29 05:23:29] 2026-01-29 10:22:50,536 | INFO     | sum of square deviations: 6662222485.744644
[2026-01-29 05:23:29] 2026-01-29 10:22:50,550 | INFO     | sum of deviations: 13493160755.230236
[2026-01-29 05:23:29] 2026-01-29 10:22:50,551 | INFO     | mean x: 1769673316.643885
[2026-01-29 05:23:29] 2026-01-29 10:22:50,551 | INFO     | mean y: 2716463.194244604
[2026-01-29 05:23:29] 2026-01-29 10:22:50,551 | INFO     | intersect: -3581445818.508432
[2026-01-29 05:23:29] 2026-01-29 10:22:50,551 | INFO     | chi2: 0.06568380560264515
[2026-01-29 05:23:29] 2026-01-29 10:22:50,551 | INFO     | current memory leak: 2.03 B/s (using 278 data points, chi2=0.07)
[2026-01-29 05:23:29] 2026-01-29 10:22:50,552 | INFO     | could have reported an average CPU frequency of 3301 MHz (14 samples)
[2026-01-29 05:23:29] 2026-01-29 10:22:50,552 | INFO     | ..............................
[2026-01-29 05:23:29] 2026-01-29 10:22:50,552 | INFO     | . Timing measurements:
[2026-01-29 05:23:29] 2026-01-29 10:22:50,552 | INFO     | . get job = 0 s
[2026-01-29 05:23:29] 2026-01-29 10:22:50,552 | INFO     | . initial setup = 23 s
[2026-01-29 05:23:29] 2026-01-29 10:22:50,552 | INFO     | . payload setup = 32 s
[2026-01-29 05:23:29] 2026-01-29 10:22:50,552 | INFO     | . stage-in = 0 s
[2026-01-29 05:23:29] 2026-01-29 10:22:50,552 | INFO     | . payload execution = 19138 s
[2026-01-29 05:23:29] 2026-01-29 10:22:50,552 | INFO     | . stage-out = 4 s
[2026-01-29 05:23:29] 2026-01-29 10:22:50,552 | INFO     | . log creation = 0 s
[2026-01-29 05:23:29] 2026-01-29 10:22:50,552 | INFO     | ..............................
[2026-01-29 05:23:29] 2026-01-29 10:22:50,903 | INFO     | 
[2026-01-29 05:23:29] 2026-01-29 10:22:50,928 | INFO     | job summary report
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | --------------------------------------------------
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | PanDA job id: 6987907405
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | task id: 48317952
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | errors: (none)
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | pilot state: finished 
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | transexitcode: 0
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | exeerrorcode: 0
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | exeerrordiag: 
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | exitcode: 0
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | exitmsg: OK
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | cpuconsumptiontime: 32853 s
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | nevents: 400
[2026-01-29 05:23:29] 2026-01-29 10:22:50,929 | INFO     | neventsw: 0
[2026-01-29 05:23:29] 2026-01-29 10:22:50,930 | INFO     | pid: 2411656
[2026-01-29 05:23:29] 2026-01-29 10:22:50,930 | INFO     | pgrp: 2411656
[2026-01-29 05:23:29] 2026-01-29 10:22:50,930 | INFO     | corecount: 12
[2026-01-29 05:23:29] 2026-01-29 10:22:50,930 | INFO     | event service: False
[2026-01-29 05:23:29] 2026-01-29 10:22:50,930 | INFO     | sizes: {0: 2283151, 1: 2283836, 2: 2283836, 3: 2284325, 14: 2284325, 19177: 2317249, 19178: 2317376, 19184: 2326430, 19186: 2326486, 19188: 2326680}
[2026-01-29 05:23:29] 2026-01-29 10:22:50,930 | INFO     | --------------------------------------------------
[2026-01-29 05:23:29] 2026-01-29 10:22:50,930 | INFO     | 
[2026-01-29 05:23:29] 2026-01-29 10:22:50,930 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-29 05:23:29] 2026-01-29 10:22:51,085 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,085 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,085 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,085 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,086 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 05:23:29] 2026-01-29 10:22:51,087 | INFO     | job 6987907405 has completed (purged errors)
[2026-01-29 05:23:29] 2026-01-29 10:22:51,087 | INFO     | overall cleanup function is called
[2026-01-29 05:23:29] 2026-01-29 10:22:51,782 | INFO     | PID=2387576 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-29 05:23:29] 2026-01-29 10:22:51,804 | INFO     | .. there are 58 such processes running
[2026-01-29 05:23:29] 2026-01-29 10:22:52,099 | INFO     | --- collectZombieJob: --- 10, [2411656]
[2026-01-29 05:23:29] 2026-01-29 10:22:52,099 | INFO     | zombie collector waiting for pid 2411656
[2026-01-29 05:23:29] 2026-01-29 10:22:52,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 05:23:29] 2026-01-29 10:22:52,100 | INFO     | collected zombie processes
[2026-01-29 05:23:29] 2026-01-29 10:22:52,100 | INFO     | will attempt to kill all subprocesses of pid=2411656
[2026-01-29 05:23:29] 2026-01-29 10:22:53,676 | INFO     | process IDs to be killed: [2411656] (in reverse order)
[2026-01-29 05:23:29] 2026-01-29 10:22:53,989 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 05:23:29] 2026-01-29 10:22:53,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 05:23:29] 2026-01-29 10:22:54,037 | INFO     | did not find any defunct processes belonging to 2411656
[2026-01-29 05:23:29] 2026-01-29 10:22:54,064 | INFO     | did not find any defunct processes belonging to 2411656
[2026-01-29 05:23:29] 2026-01-29 10:22:54,064 | INFO     | ready for new job
[2026-01-29 05:23:29] 2026-01-29 10:22:54,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 05:23:29] 2026-01-29 10:22:54,067 | INFO     | **************************************
[2026-01-29 05:23:29] 2026-01-29 10:22:54,068 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 05:23:29] 2026-01-29 10:22:54,068 | INFO     | **************************************
[2026-01-29 05:23:29] 2026-01-29 10:22:54,068 | INFO     | 
[2026-01-29 05:23:29] 2026-01-29 10:22:54,099 | INFO     | architecture information:
[2026-01-29 05:23:29] 2026-01-29 10:22:54,123 | INFO     | executing command: cat /etc/os-release
[2026-01-29 05:23:29] 2026-01-29 10:22:54,204 | INFO     | cat /etc/os-release:
[2026-01-29 05:23:29] NAME="CentOS Linux"
[2026-01-29 05:23:29] VERSION="7 (Core)"
[2026-01-29 05:23:29] ID="centos"
[2026-01-29 05:23:29] ID_LIKE="rhel fedora"
[2026-01-29 05:23:29] VERSION_ID="7"
[2026-01-29 05:23:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 05:23:29] ANSI_COLOR="0;31"
[2026-01-29 05:23:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 05:23:29] HOME_URL="https://www.centos.org/"
[2026-01-29 05:23:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 05:23:29] 
[2026-01-29 05:23:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 05:23:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 05:23:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 05:23:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 05:23:29] 
[2026-01-29 05:23:29] 2026-01-29 10:22:54,205 | INFO     | **************************************
[2026-01-29 05:23:29] 2026-01-29 10:22:54,708 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-29 05:23:29] 2026-01-29 10:22:54,787 | INFO     | sufficient remaining disk space (124730212352 B)
[2026-01-29 05:23:29] 2026-01-29 10:22:54,787 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 05:23:29] 2026-01-29 10:22:54,787 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 05:23:29] 2026-01-29 10:22:54,787 | INFO     | update_server=False
[2026-01-29 05:23:29] 2026-01-29 10:22:54,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 05:23:29] 2026-01-29 10:22:54,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 05:23:29] 2026-01-29 10:22:54,788 | INFO     | aborting loop
[2026-01-29 05:23:29] 2026-01-29 10:22:54,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 05:23:29] 2026-01-29 10:22:54,851 | INFO     | all payload control threads have been joined
[2026-01-29 05:23:29] 2026-01-29 10:22:54,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 05:23:29] 2026-01-29 10:22:55,060 | INFO     | all job control threads have been joined
[2026-01-29 05:23:29] 2026-01-29 10:22:55,460 | INFO     | all data control threads have been joined
[2026-01-29 05:23:29] 2026-01-29 10:22:55,793 | INFO     | [job] retrieve thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:55,798 | INFO     | [job] job monitor thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:55,857 | INFO     | [payload] control thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:55,987 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 05:23:29] 2026-01-29 10:22:56,014 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:56,018 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:56,070 | INFO     | [job] control thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:56,466 | INFO     | [data] control thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:56,522 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:56,581 | INFO     | [data] copytool_in thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:56,585 | INFO     | [job] validate thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:56,682 | INFO     | [payload] validate_post thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:56,794 | INFO     | [data] copytool_out thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:57,001 | INFO     | [job] queue monitor thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:57,153 | INFO     | [payload] failed_post thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:57,205 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:22:58,944 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 05:23:29] 2026-01-29 10:23:21,579 | INFO     | [monitor] cgroup control has ended
[2026-01-29 05:23:29] 2026-01-29 10:23:23,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139814895859520)>', '<ExcThread(monitor, started 139814540146432)>']
[2026-01-29 05:23:29] 2026-01-29 10:23:24,851 | INFO     | PID=2387576 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-29 05:23:29] 2026-01-29 10:23:24,851 | INFO     | .. there are 58 such processes running
[2026-01-29 05:23:29] 2026-01-29 10:23:24,851 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 05:23:29] 2026-01-29 10:23:24,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 05:23:29] 2026-01-29 10:23:24,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 05:23:29] 2026-01-29 10:23:24,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 05:23:29] 2026-01-29 10:23:24,852 | INFO     | [monitor] control thread has ended
[2026-01-29 05:23:29] 2026-01-29 10:23:28,123 | INFO     | all workflow threads have been joined
[2026-01-29 05:23:29] 2026-01-29 10:23:28,123 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 05:23:29] 2026-01-29 10:23:28,124 | INFO     | traces error code: 0
[2026-01-29 05:23:29] 2026-01-29 10:23:28,124 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 05:23:29] 2026-01-29 10:23:28,978 [wrapper] ==== pilot stdout END ====
[2026-01-29 05:23:29] 2026-01-29 10:23:29,012 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 05:23:29] 2026-01-29 10:23:29,073 [wrapper] pilotpid: 2387576
[2026-01-29 05:23:29] 2026-01-29 10:23:29,117 [wrapper] Pilot exit status: 0
[2026-01-29 05:23:29] 2026-01-29 10:23:29,145 [wrapper] pandaids: 6987907405
[2026-01-29 05:23:29] 2026-01-29 10:23:29,300 [wrapper] cleanup supervisor_pilot  104013 2387577
[2026-01-29 05:23:29] 2026-01-29 10:23:29,337 [wrapper] Test setup, not cleaning
[2026-01-29 05:23:29] 2026-01-29 10:23:29,363 [wrapper] apfmon messages muted
[2026-01-29 05:23:29] 2026-01-29 10:23:29,390 [wrapper] ==== wrapper stdout END ====
[2026-01-29 05:23:29] 2026-01-29 10:23:29,397 [wrapper] ==== wrapper stderr END ====
[2026-01-29 05:23:29]  *** Error codes and diagnostics ***
[2026-01-29 05:23:29]     "exeErrorCode": 0,
[2026-01-29 05:23:29]     "exeErrorDiag": "",
[2026-01-29 05:23:29]     "pilotErrorCode": 0,
[2026-01-29 05:23:29]     "pilotErrorDiag": "",
[2026-01-29 05:23:29]  *** Listing of results directory ***
[2026-01-29 05:23:29] total 673684
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas    584422 Jan 28 17:30 pilot3.tar.gz
[2026-01-29 05:23:29] -rwx------. 1 boincer umatlas     36322 Jan 28 17:32 runpilot2-wrapper.sh
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas      5111 Jan 28 17:33 queuedata.json
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas       100 Jan 29 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 05:23:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 29 00:01 run_atlas
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas       105 Jan 29 00:01 job.xml
[2026-01-29 05:23:29] -rw-r--r--. 2 boincer umatlas 496244010 Jan 29 00:01 EVNT.48317949._000070.pool.root.1
[2026-01-29 05:23:29] -rw-r--r--. 2 boincer umatlas     15845 Jan 29 00:01 start_atlas.sh
[2026-01-29 05:23:29] drwxrwx--x. 2 boincer umatlas      4096 Jan 29 00:01 shared
[2026-01-29 05:23:29] -rw-r--r--. 2 boincer umatlas    597764 Jan 29 00:01 input.tar.gz
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas         0 Jan 29 00:01 boinc_lockfile
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas      2522 Jan 29 00:01 pandaJob.out
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas        57 Jan 29 00:01 setup.sh.local
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas   1005755 Jan 29 00:02 agis_schedconf.cvmfs.json
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas       430 Jan 29 00:02 workernode_map.json
[2026-01-29 05:23:29] drwx------. 5 boincer umatlas      4096 Jan 29 00:02 pilot3
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas 183798732 Jan 29 05:22 HITS.48317952._003513.pool.root.1
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas       531 Jan 29 05:22 boinc_task_state.xml
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas      1050 Jan 29 05:22 memory_monitor_summary.json
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas        95 Jan 29 05:22 pilot_heartbeat.json
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas   1516246 Jan 29 05:22 agis_ddmendpoints.agis.ALL.json
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas    600374 Jan 29 05:22 log.48317952._003513.job.log.tgz.1
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas      6957 Jan 29 05:22 init_data.xml
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas      6365 Jan 29 05:22 heartbeat.json
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas      8192 Jan 29 05:23 boinc_mmap_file
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas        28 Jan 29 05:23 wrapper_checkpoint.txt
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas      4821 Jan 29 05:23 pilotlog.txt
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas   2334514 Jan 29 05:23 log.48317952._003513.job.log.1
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas       357 Jan 29 05:23 output.list
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas       620 Jan 29 05:23 runtime_log
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas   2949120 Jan 29 05:23 result.tar.gz
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas      9344 Jan 29 05:23 runtime_log.err
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas       660 Jan 29 05:23 A5XKDmXGT58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKMHKDmF23LYn.diag
[2026-01-29 05:23:29] -rw-r--r--. 1 boincer umatlas     21275 Jan 29 05:23 stderr.txt
[2026-01-29 05:23:29] HITS file was successfully produced:
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas 183798732 Jan 29 05:22 shared/HITS.pool.root.1
[2026-01-29 05:23:29]  *** Contents of shared directory: ***
[2026-01-29 05:23:29] total 667596
[2026-01-29 05:23:29] -rw-r--r--. 2 boincer umatlas 496244010 Jan 29 00:01 ATLAS.root_0
[2026-01-29 05:23:29] -rw-r--r--. 2 boincer umatlas     15845 Jan 29 00:01 start_atlas.sh
[2026-01-29 05:23:29] -rw-r--r--. 2 boincer umatlas    597764 Jan 29 00:01 input.tar.gz
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas 183798732 Jan 29 05:22 HITS.pool.root.1
[2026-01-29 05:23:29] -rw-------. 1 boincer umatlas   2949120 Jan 29 05:23 result.tar.gz
05:23:31 (2377910): run_atlas exited; CPU time 33752.224640
05:23:31 (2377910): called boinc_finish(0)

</stderr_txt>
]]>

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