Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:31:46 (12987): wrapper (7.7.26015): starting
23:31:46 (12987): wrapper: running run_atlas (--nthreads 12)
[2026-01-28 23:31:46] Arguments: --nthreads 12
[2026-01-28 23:31:46] Threads: 12
[2026-01-28 23:31:46] Checking for CVMFS
[2026-01-28 23:31:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 23:31:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 23:31:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 23:31:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 23:31:47] 2.11.2.0 2991 379319 98132 155626 1 188 17487564 20275200 1 130560 1 162335716 99.945 23787812 16932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-28 23:31:47] CVMFS is ok
[2026-01-28 23:31:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 23:31:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 23:31:47] Further information can be found at the LHC@home message board.
[2026-01-28 23:31:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 23:31:47] Checking for apptainer binary...
[2026-01-28 23:31:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 23:31:47] Running /usr/bin/apptainer --version
[2026-01-28 23:31:47] apptainer version 1.3.2-1.el7
[2026-01-28 23:31:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 23:31:48] c-205-32.aglt2.org
[2026-01-28 23:31:48] apptainer works
[2026-01-28 23:31:48] Set ATHENA_PROC_NUMBER=12
[2026-01-28 23:31:48] Set ATHENA_CORE_NUMBER=12
[2026-01-28 23:31:48] Starting ATLAS job with PandaID=6988006607
[2026-01-28 23:31:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 00:43:19]  *** The last 200 lines of the pilot log: ***
[2026-01-29 00:43:19]  filetype=log
[2026-01-29 00:43:19]  guid=d404aeff-96bc-4e55-9baa-cca7a9783fbd
[2026-01-29 00:43:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-29 00:43:19]  is_altstaged=None
[2026-01-29 00:43:19]  is_tar=False
[2026-01-29 00:43:19]  lfn=log.48310620._002531.job.log.tgz.1
[2026-01-29 00:43:19]  mtime=0
[2026-01-29 00:43:19]  protocol_id=None
[2026-01-29 00:43:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-29 00:43:19]  replicas=None
[2026-01-29 00:43:19]  scope=mc23_13p6TeV
[2026-01-29 00:43:19]  status=None
[2026-01-29 00:43:19]  status_code=0
[2026-01-29 00:43:19]  storage_token=
[2026-01-29 00:43:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6988006607/log.48310620._002531.job.log.tgz.1
[2026-01-29 00:43:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/88/log.48310620._002531.job.log.tgz.1
[2026-01-29 00:43:19]  workdir=None
[2026-01-29 00:43:19] ]
[2026-01-29 00:43:19] 2026-01-29 05:42:26,950 | INFO     | transferring file log.48310620._002531.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6988006607/log.48310620._002531.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-29 00:43:19] 2026-01-29 05:42:26,950 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6988006607/log.48310620._002531.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310620._002531.job
[2026-01-29 00:43:19] 2026-01-29 05:42:26,972 | INFO     | adding to output.list: log.48310620._002531.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/88/log.48310620._002531.job.log.tg
[2026-01-29 00:43:19] 2026-01-29 05:42:26,973 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-29 00:43:19] 2026-01-29 05:42:26,973 | INFO     | summary of transferred files:
[2026-01-29 00:43:19] 2026-01-29 05:42:26,973 | INFO     |  -- lfn=log.48310620._002531.job.log.tgz.1, status_code=0, status=transferred
[2026-01-29 00:43:19] 2026-01-29 05:42:26,974 | INFO     | stage-out finished correctly
[2026-01-29 00:43:19] 2026-01-29 05:42:27,055 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-29 00:43:19] 2026-01-29 05:42:27,079 | INFO     | time since job start (4219s) is within the limit (349056.0s)
[2026-01-29 00:43:19] 2026-01-29 05:42:27,133 | INFO     | job 6988006607 has state=finished
[2026-01-29 00:43:19] 2026-01-29 05:42:27,134 | INFO     | preparing for final server update for job 6988006607 in state='finished'
[2026-01-29 00:43:19] 2026-01-29 05:42:27,134 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6988006607/jobReport.json
[2026-01-29 00:43:19] 2026-01-29 05:42:27,137 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-29 00:43:19] 2026-01-29 05:42:27,137 | INFO     | this job has now completed (state=finished)
[2026-01-29 00:43:19] 2026-01-29 05:42:27,137 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-29 00:43:19] 2026-01-29 05:42:27,137 | INFO     | log transfer has been attempted: DONE
[2026-01-29 00:43:19] 2026-01-29 05:42:27,138 | INFO     | job 6988006607 has finished - writing final server update
[2026-01-29 00:43:19] 2026-01-29 05:42:27,138 | INFO     | total number of processed events: 400 (read)
[2026-01-29 00:43:19] 2026-01-29 05:42:27,140 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6988006607/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 00:43:19] 2026-01-29 05:42:27,140 | INFO     | extracted standard info from prmon json
[2026-01-29 00:43:19] 2026-01-29 05:42:27,140 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 00:43:19] 2026-01-29 05:42:27,140 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 00:43:19] 2026-01-29 05:42:27,140 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 00:43:19] 2026-01-29 05:42:27,141 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 00:43:19] 2026-01-29 05:42:27,142 | INFO     | fitting pss+swap vs Time
[2026-01-29 00:43:19] 2026-01-29 05:42:27,142 | INFO     | sum of square deviations: 73882315.5
[2026-01-29 00:43:19] 2026-01-29 05:42:27,142 | INFO     | sum of deviations: 1460812262.0000002
[2026-01-29 00:43:19] 2026-01-29 05:42:27,143 | INFO     | mean x: 1769663316.5
[2026-01-29 00:43:19] 2026-01-29 05:42:27,143 | INFO     | mean y: 2973117.2580645164
[2026-01-29 00:43:19] 2026-01-29 05:42:27,143 | INFO     | intersect: -34987076326.370804
[2026-01-29 00:43:19] 2026-01-29 05:42:27,143 | INFO     | chi2: 0.0031086624362463644
[2026-01-29 00:43:19] 2026-01-29 05:42:27,143 | INFO     | current memory leak: 19.77 B/s (using 62 data points, chi2=0.00)
[2026-01-29 00:43:19] 2026-01-29 05:42:27,143 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-01-29 00:43:19] 2026-01-29 05:42:27,144 | INFO     | ..............................
[2026-01-29 00:43:19] 2026-01-29 05:42:27,144 | INFO     | . Timing measurements:
[2026-01-29 00:43:19] 2026-01-29 05:42:27,144 | INFO     | . get job = 0 s
[2026-01-29 00:43:19] 2026-01-29 05:42:27,144 | INFO     | . initial setup = 7 s
[2026-01-29 00:43:19] 2026-01-29 05:42:27,144 | INFO     | . payload setup = 6 s
[2026-01-29 00:43:19] 2026-01-29 05:42:27,144 | INFO     | . stage-in = 0 s
[2026-01-29 00:43:19] 2026-01-29 05:42:27,144 | INFO     | . payload execution = 4196 s
[2026-01-29 00:43:19] 2026-01-29 05:42:27,144 | INFO     | . stage-out = 0 s
[2026-01-29 00:43:19] 2026-01-29 05:42:27,144 | INFO     | . log creation = 0 s
[2026-01-29 00:43:19] 2026-01-29 05:42:27,145 | INFO     | ..............................
[2026-01-29 00:43:19] 2026-01-29 05:42:27,221 | INFO     | 
[2026-01-29 00:43:19] 2026-01-29 05:42:27,221 | INFO     | job summary report
[2026-01-29 00:43:19] 2026-01-29 05:42:27,221 | INFO     | --------------------------------------------------
[2026-01-29 00:43:19] 2026-01-29 05:42:27,221 | INFO     | PanDA job id: 6988006607
[2026-01-29 00:43:19] 2026-01-29 05:42:27,221 | INFO     | task id: 48310620
[2026-01-29 00:43:19] 2026-01-29 05:42:27,222 | INFO     | errors: (none)
[2026-01-29 00:43:19] 2026-01-29 05:42:27,222 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 00:43:19] 2026-01-29 05:42:27,222 | INFO     | pilot state: finished 
[2026-01-29 00:43:19] 2026-01-29 05:42:27,222 | INFO     | transexitcode: 0
[2026-01-29 00:43:19] 2026-01-29 05:42:27,222 | INFO     | exeerrorcode: 0
[2026-01-29 00:43:19] 2026-01-29 05:42:27,222 | INFO     | exeerrordiag: 
[2026-01-29 00:43:19] 2026-01-29 05:42:27,223 | INFO     | exitcode: 0
[2026-01-29 00:43:19] 2026-01-29 05:42:27,223 | INFO     | exitmsg: OK
[2026-01-29 00:43:19] 2026-01-29 05:42:27,223 | INFO     | cpuconsumptiontime: 44291 s
[2026-01-29 00:43:19] 2026-01-29 05:42:27,223 | INFO     | nevents: 400
[2026-01-29 00:43:19] 2026-01-29 05:42:27,223 | INFO     | neventsw: 0
[2026-01-29 00:43:19] 2026-01-29 05:42:27,223 | INFO     | pid: 21396
[2026-01-29 00:43:19] 2026-01-29 05:42:27,224 | INFO     | pgrp: 21396
[2026-01-29 00:43:19] 2026-01-29 05:42:27,224 | INFO     | corecount: 12
[2026-01-29 00:43:19] 2026-01-29 05:42:27,224 | INFO     | event service: False
[2026-01-29 00:43:19] 2026-01-29 05:42:27,224 | INFO     | sizes: {0: 2283749, 1: 2284210, 11: 2284210, 4207: 2310098, 4208: 2319290}
[2026-01-29 00:43:19] 2026-01-29 05:42:27,224 | INFO     | --------------------------------------------------
[2026-01-29 00:43:19] 2026-01-29 05:42:27,224 | INFO     | 
[2026-01-29 00:43:19] 2026-01-29 05:42:27,225 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-29 00:43:19] 2026-01-29 05:42:27,247 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,248 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,248 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,248 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,249 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,249 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,249 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,250 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,250 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,250 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,250 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,250 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,250 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 00:43:19] 2026-01-29 05:42:27,251 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,251 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 00:43:19] 2026-01-29 05:42:27,251 | INFO     | job 6988006607 has completed (purged errors)
[2026-01-29 00:43:19] 2026-01-29 05:42:27,251 | INFO     | overall cleanup function is called
[2026-01-29 00:43:19] 2026-01-29 05:42:28,259 | INFO     | --- collectZombieJob: --- 10, [21396]
[2026-01-29 00:43:19] 2026-01-29 05:42:28,259 | INFO     | zombie collector waiting for pid 21396
[2026-01-29 00:43:19] 2026-01-29 05:42:28,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 00:43:19] 2026-01-29 05:42:28,260 | INFO     | collected zombie processes
[2026-01-29 00:43:19] 2026-01-29 05:42:28,260 | INFO     | will attempt to kill all subprocesses of pid=21396
[2026-01-29 00:43:19] 2026-01-29 05:42:28,349 | INFO     | process IDs to be killed: [21396] (in reverse order)
[2026-01-29 00:43:19] 2026-01-29 05:42:28,399 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 00:43:19] 2026-01-29 05:42:28,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 00:43:19] 2026-01-29 05:42:28,403 | INFO     | did not find any defunct processes belonging to 21396
[2026-01-29 00:43:19] 2026-01-29 05:42:28,407 | INFO     | did not find any defunct processes belonging to 21396
[2026-01-29 00:43:19] 2026-01-29 05:42:28,407 | INFO     | ready for new job
[2026-01-29 00:43:19] 2026-01-29 05:42:28,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 00:43:19] 2026-01-29 05:42:28,408 | INFO     | **************************************
[2026-01-29 00:43:19] 2026-01-29 05:42:28,408 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 00:43:19] 2026-01-29 05:42:28,409 | INFO     | **************************************
[2026-01-29 00:43:19] 2026-01-29 05:42:28,409 | INFO     | 
[2026-01-29 00:43:19] 2026-01-29 05:42:28,409 | INFO     | architecture information:
[2026-01-29 00:43:19] 2026-01-29 05:42:28,410 | INFO     | executing command: cat /etc/os-release
[2026-01-29 00:43:19] 2026-01-29 05:42:28,424 | INFO     | cat /etc/os-release:
[2026-01-29 00:43:19] NAME="CentOS Linux"
[2026-01-29 00:43:19] VERSION="7 (Core)"
[2026-01-29 00:43:19] ID="centos"
[2026-01-29 00:43:19] ID_LIKE="rhel fedora"
[2026-01-29 00:43:19] VERSION_ID="7"
[2026-01-29 00:43:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 00:43:19] ANSI_COLOR="0;31"
[2026-01-29 00:43:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 00:43:19] HOME_URL="https://www.centos.org/"
[2026-01-29 00:43:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 00:43:19] 
[2026-01-29 00:43:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 00:43:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 00:43:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 00:43:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 00:43:19] 
[2026-01-29 00:43:19] 2026-01-29 05:42:28,424 | INFO     | **************************************
[2026-01-29 00:43:19] 2026-01-29 05:42:28,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-29 00:43:19] 2026-01-29 05:42:28,943 | INFO     | sufficient remaining disk space (28716302336 B)
[2026-01-29 00:43:19] 2026-01-29 05:42:28,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 00:43:19] 2026-01-29 05:42:28,944 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 00:43:19] 2026-01-29 05:42:28,944 | INFO     | update_server=False
[2026-01-29 00:43:19] 2026-01-29 05:42:28,944 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 00:43:19] 2026-01-29 05:42:28,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 00:43:19] 2026-01-29 05:42:28,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 00:43:19] 2026-01-29 05:42:28,945 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-29 00:43:19] 2026-01-29 05:42:28,945 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 00:43:19] 2026-01-29 05:42:28,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 00:43:19] 2026-01-29 05:42:28,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 00:43:19] 2026-01-29 05:42:29,468 | INFO     | all job control threads have been joined
[2026-01-29 00:43:19] 2026-01-29 05:42:29,751 | INFO     | all data control threads have been joined
[2026-01-29 00:43:19] 2026-01-29 05:42:29,946 | INFO     | all payload control threads have been joined
[2026-01-29 00:43:19] 2026-01-29 05:42:29,950 | INFO     | [job] retrieve thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:29,951 | INFO     | [job] queue monitor thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:30,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 00:43:19] 2026-01-29 05:42:30,121 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:30,144 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:30,427 | INFO     | [payload] validate_post thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:30,473 | INFO     | [job] control thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:30,489 | WARNING  | process 21396 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 00:43:19] 2026-01-29 05:42:30,536 | INFO     | [data] copytool_in thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:30,561 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 00:43:19] 2026-01-29 05:42:30,643 | INFO     | number of running child processes to parent process 21396: 1
[2026-01-29 00:43:19] 2026-01-29 05:42:30,643 | INFO     | maximum number of monitored processes: 6
[2026-01-29 00:43:19] 2026-01-29 05:42:30,643 | INFO     | aborting job monitoring since job object (job id=6988006607) has expired
[2026-01-29 00:43:19] 2026-01-29 05:42:30,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 00:43:19] 2026-01-29 05:42:30,644 | INFO     | will abort loop
[2026-01-29 00:43:19] 2026-01-29 05:42:30,756 | INFO     | [data] control thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:30,815 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:30,949 | INFO     | [payload] control thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:31,024 | INFO     | [job] validate thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:31,309 | INFO     | [payload] failed_post thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:31,362 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:31,647 | INFO     | [job] job monitor thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:32,066 | INFO     | [data] copytool_out thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:42:32,950 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 00:43:19] 2026-01-29 05:43:14,035 | INFO     | [monitor] cgroup control has ended
[2026-01-29 00:43:19] 2026-01-29 05:43:14,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218218071872)>', '<ExcThread(monitor, started 140217654699776)>']
[2026-01-29 00:43:19] 2026-01-29 05:43:15,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 00:43:19] 2026-01-29 05:43:15,156 | INFO     | [monitor] control thread has ended
[2026-01-29 00:43:19] 2026-01-29 05:43:19,453 | INFO     | all workflow threads have been joined
[2026-01-29 00:43:19] 2026-01-29 05:43:19,453 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 00:43:19] 2026-01-29 05:43:19,453 | INFO     | traces error code: 0
[2026-01-29 00:43:19] 2026-01-29 05:43:19,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 00:43:19] 2026-01-29 05:43:19,539 [wrapper] ==== pilot stdout END ====
[2026-01-29 00:43:19] 2026-01-29 05:43:19,543 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 00:43:19] 2026-01-29 05:43:19,546 [wrapper] pilotpid: 16971
[2026-01-29 00:43:19] 2026-01-29 05:43:19,550 [wrapper] Pilot exit status: 0
[2026-01-29 00:43:19] 2026-01-29 05:43:19,565 [wrapper] pandaids: 6988006607
[2026-01-29 00:43:19] 2026-01-29 05:43:19,609 [wrapper] cleanup supervisor_pilot  7363 16972
[2026-01-29 00:43:19] 2026-01-29 05:43:19,613 [wrapper] Test setup, not cleaning
[2026-01-29 00:43:19] 2026-01-29 05:43:19,617 [wrapper] apfmon messages muted
[2026-01-29 00:43:19] 2026-01-29 05:43:19,621 [wrapper] ==== wrapper stdout END ====
[2026-01-29 00:43:19] 2026-01-29 05:43:19,625 [wrapper] ==== wrapper stderr END ====
[2026-01-29 00:43:19]  *** Error codes and diagnostics ***
[2026-01-29 00:43:19]     "exeErrorCode": 0,
[2026-01-29 00:43:19]     "exeErrorDiag": "",
[2026-01-29 00:43:19]     "pilotErrorCode": 0,
[2026-01-29 00:43:19]     "pilotErrorDiag": "",
[2026-01-29 00:43:19]  *** Listing of results directory ***
[2026-01-29 00:43:19] total 716696
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas    584422 Jan 28 17:30 pilot3.tar.gz
[2026-01-29 00:43:19] -rwx------ 1 boincer umatlas     36322 Jan 28 17:32 runpilot2-wrapper.sh
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas      5111 Jan 28 17:33 queuedata.json
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas       100 Jan 28 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 00:43:19] -rwxr-xr-x 1 boincer umatlas      7986 Jan 28 23:31 run_atlas
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas       105 Jan 28 23:31 job.xml
[2026-01-29 00:43:19] -rw-r--r-- 2 boincer umatlas 533880558 Jan 28 23:31 EVNT.48310618._000051.pool.root.1
[2026-01-29 00:43:19] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 23:31 start_atlas.sh
[2026-01-29 00:43:19] drwxrwx--x 2 boincer umatlas      4096 Jan 28 23:31 shared
[2026-01-29 00:43:19] -rw-r--r-- 2 boincer umatlas    597756 Jan 28 23:31 input.tar.gz
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas         0 Jan 28 23:31 boinc_lockfile
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas      2523 Jan 28 23:31 pandaJob.out
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas        57 Jan 28 23:31 setup.sh.local
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas   1005755 Jan 28 23:32 agis_schedconf.cvmfs.json
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas   1516246 Jan 28 23:32 agis_ddmendpoints.agis.ALL.json
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas       434 Jan 28 23:32 workernode_map.json
[2026-01-29 00:43:19] drwx------ 5 boincer umatlas      4096 Jan 28 23:32 pilot3
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas      5952 Jan 29 00:41 init_data.xml
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas 194079742 Jan 29 00:41 HITS.48310620._002531.pool.root.1
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas        95 Jan 29 00:41 pilot_heartbeat.json
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas       530 Jan 29 00:42 boinc_task_state.xml
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas      1054 Jan 29 00:42 memory_monitor_summary.json
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas    377966 Jan 29 00:42 log.48310620._002531.job.log.tgz.1
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas      6396 Jan 29 00:42 heartbeat.json
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas      8192 Jan 29 00:43 boinc_mmap_file
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas        27 Jan 29 00:43 wrapper_checkpoint.txt
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas      5065 Jan 29 00:43 pilotlog.txt
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas    617941 Jan 29 00:43 log.48310620._002531.job.log.1
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas       357 Jan 29 00:43 output.list
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas       620 Jan 29 00:43 runtime_log
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas   1013760 Jan 29 00:43 result.tar.gz
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas       656 Jan 29 00:43 WdBLDmAGT58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCJHKDmd1KQan.diag
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas      9343 Jan 29 00:43 runtime_log.err
[2026-01-29 00:43:19] -rw-r--r-- 1 boincer umatlas     21211 Jan 29 00:43 stderr.txt
[2026-01-29 00:43:19] HITS file was successfully produced:
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas 194079742 Jan 29 00:41 shared/HITS.pool.root.1
[2026-01-29 00:43:19]  *** Contents of shared directory: ***
[2026-01-29 00:43:19] total 712500
[2026-01-29 00:43:19] -rw-r--r-- 2 boincer umatlas 533880558 Jan 28 23:31 ATLAS.root_0
[2026-01-29 00:43:19] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 23:31 start_atlas.sh
[2026-01-29 00:43:19] -rw-r--r-- 2 boincer umatlas    597756 Jan 28 23:31 input.tar.gz
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas 194079742 Jan 29 00:41 HITS.pool.root.1
[2026-01-29 00:43:19] -rw------- 1 boincer umatlas   1013760 Jan 29 00:43 result.tar.gz
00:43:20 (12987): run_atlas exited; CPU time 44277.984994
00:43:20 (12987): called boinc_finish(0)

</stderr_txt>
]]>

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