Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
20:47:12 (255106): wrapper (7.7.26015): starting
20:47:12 (255106): wrapper: running run_atlas (--nthreads 12)
[2026-01-29 20:47:12] Arguments: --nthreads 12
[2026-01-29 20:47:12] Threads: 12
[2026-01-29 20:47:12] Checking for CVMFS
[2026-01-29 20:47:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 20:47:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 20:47:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 20:47:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 20:47:13] 2.12.7.0 3066881 2263 75200 155661 1 50 3393403 4194305 917 130560 0 2643544 99.825 336975 683 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-01-29 20:47:13] CVMFS is ok
[2026-01-29 20:47:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 20:47:13] Checking for apptainer binary...
[2026-01-29 20:47:13] apptainer is not installed, using version from CVMFS
[2026-01-29 20:47:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 20:47:14] Trebeth
[2026-01-29 20:47:14] apptainer works
[2026-01-29 20:47:14] Set ATHENA_PROC_NUMBER=12
[2026-01-29 20:47:14] Set ATHENA_CORE_NUMBER=12
[2026-01-29 20:47:14] Starting ATLAS job with PandaID=6985859226
[2026-01-29 20:47:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 21:54:52]  *** The last 200 lines of the pilot log: ***
[2026-01-29 21:54:52]  lfn=log.48317872._007605.job.log.tgz.1
[2026-01-29 21:54:52]  mtime=0
[2026-01-29 21:54:52]  protocol_id=None
[2026-01-29 21:54:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-29 21:54:52]  replicas=None
[2026-01-29 21:54:52]  scope=mc23_13p6TeV
[2026-01-29 21:54:52]  status=None
[2026-01-29 21:54:52]  status_code=0
[2026-01-29 21:54:52]  storage_token=
[2026-01-29 21:54:52]  surl=/var/lib/boinc-client/slots/6/PanDA_Pilot-6985859226/log.48317872._007605.job.log.tgz.1
[2026-01-29 21:54:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/a7/log.48317872._007605.job.log.tgz.1
[2026-01-29 21:54:52]  workdir=None
[2026-01-29 21:54:52] ]
[2026-01-29 21:54:52] 2026-01-30 02:53:45,330 | INFO     | transferring file log.48317872._007605.job.log.tgz.1 from /var/lib/boinc-client/slots/6/PanDA_Pilot-6985859226/log.48317872._007605.job.log.tgz.1 to /var/lib/boinc
[2026-01-29 21:54:52] 2026-01-30 02:53:45,330 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-6985859226/log.48317872._007605.job.log.tgz.1 /var/lib/boinc-client/slots/6/log.483178
[2026-01-29 21:54:52] 2026-01-30 02:53:45,344 | INFO     | adding to output.list: log.48317872._007605.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/a7/log.48317872._007605.job.log.tg
[2026-01-29 21:54:52] 2026-01-30 02:53:45,345 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-29 21:54:52] 2026-01-30 02:53:45,345 | INFO     | summary of transferred files:
[2026-01-29 21:54:52] 2026-01-30 02:53:45,345 | INFO     |  -- lfn=log.48317872._007605.job.log.tgz.1, status_code=0, status=transferred
[2026-01-29 21:54:52] 2026-01-30 02:53:45,345 | INFO     | stage-out finished correctly
[2026-01-29 21:54:52] 2026-01-30 02:53:46,013 | INFO     | time since job start (3966s) is within the limit (349056.0s)
[2026-01-29 21:54:52] 2026-01-30 02:53:48,016 | INFO     | time since job start (3968s) is within the limit (349056.0s)
[2026-01-29 21:54:52] 2026-01-30 02:53:48,757 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-29 21:54:52] 2026-01-30 02:53:49,019 | WARNING  | process 264371 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 21:54:52] 2026-01-30 02:53:49,019 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6985859226/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 21:54:52] 2026-01-30 02:53:49,437 | INFO     | number of running child processes to parent process 264371: 1
[2026-01-29 21:54:52] 2026-01-30 02:53:49,437 | INFO     | maximum number of monitored processes: 6
[2026-01-29 21:54:52] 2026-01-30 02:53:49,454 | INFO     | PID=259498 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-29 21:54:52] 2026-01-30 02:53:49,454 | INFO     | .. there are 2 such processes running
[2026-01-29 21:54:52] 2026-01-30 02:53:50,455 | INFO     | time since job start (3970s) is within the limit (349056.0s)
[2026-01-29 21:54:52] 2026-01-30 02:53:50,926 | INFO     | job 6985859226 has state=finished
[2026-01-29 21:54:52] 2026-01-30 02:53:50,927 | INFO     | preparing for final server update for job 6985859226 in state='finished'
[2026-01-29 21:54:52] 2026-01-30 02:53:50,927 | INFO     | reading metadata from: /var/lib/boinc-client/slots/6/PanDA_Pilot-6985859226/jobReport.json
[2026-01-29 21:54:52] 2026-01-30 02:53:50,929 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/6/workernode_map.json
[2026-01-29 21:54:52] 2026-01-30 02:53:50,930 | INFO     | this job has now completed (state=finished)
[2026-01-29 21:54:52] 2026-01-30 02:53:50,930 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-29 21:54:52] 2026-01-30 02:53:50,930 | INFO     | log transfer has been attempted: DONE
[2026-01-29 21:54:52] 2026-01-30 02:53:50,930 | INFO     | job 6985859226 has finished - writing final server update
[2026-01-29 21:54:52] 2026-01-30 02:53:50,931 | INFO     | total number of processed events: 400 (read)
[2026-01-29 21:54:52] 2026-01-30 02:53:50,957 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6985859226/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 21:54:52] 2026-01-30 02:53:50,957 | INFO     | extracted standard info from prmon json
[2026-01-29 21:54:52] 2026-01-30 02:53:50,957 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 21:54:52] 2026-01-30 02:53:50,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 21:54:52] 2026-01-30 02:53:50,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 21:54:52] 2026-01-30 02:53:50,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 21:54:52] 2026-01-30 02:53:50,960 | INFO     | fitting pss+swap vs Time
[2026-01-29 21:54:52] 2026-01-30 02:53:50,960 | INFO     | sum of square deviations: 60482994.5
[2026-01-29 21:54:52] 2026-01-30 02:53:50,960 | INFO     | sum of deviations: -5800915078.5
[2026-01-29 21:54:52] 2026-01-30 02:53:50,960 | INFO     | mean x: 1769739722.5
[2026-01-29 21:54:52] 2026-01-30 02:53:50,960 | INFO     | mean y: 2784299.1896551726
[2026-01-29 21:54:52] 2026-01-30 02:53:50,961 | INFO     | intersect: 169738259966.99338
[2026-01-29 21:54:52] 2026-01-30 02:53:50,961 | INFO     | chi2: 0.12654681922185249
[2026-01-29 21:54:52] 2026-01-30 02:53:50,961 | INFO     | current memory leak: -95.91 B/s (using 58 data points, chi2=0.13)
[2026-01-29 21:54:52] 2026-01-30 02:53:50,961 | INFO     | could have reported an average CPU frequency of 3090 MHz (6 samples)
[2026-01-29 21:54:52] 2026-01-30 02:53:50,961 | INFO     | ..............................
[2026-01-29 21:54:52] 2026-01-30 02:53:50,961 | INFO     | . Timing measurements:
[2026-01-29 21:54:52] 2026-01-30 02:53:50,962 | INFO     | . get job = 0 s
[2026-01-29 21:54:52] 2026-01-30 02:53:50,962 | INFO     | . initial setup = 18 s
[2026-01-29 21:54:52] 2026-01-30 02:53:50,962 | INFO     | . payload setup = 4 s
[2026-01-29 21:54:52] 2026-01-30 02:53:50,962 | INFO     | . stage-in = 0 s
[2026-01-29 21:54:52] 2026-01-30 02:53:50,962 | INFO     | . payload execution = 3944 s
[2026-01-29 21:54:52] 2026-01-30 02:53:50,962 | INFO     | . stage-out = 0 s
[2026-01-29 21:54:52] 2026-01-30 02:53:50,962 | INFO     | . log creation = 0 s
[2026-01-29 21:54:52] 2026-01-30 02:53:50,962 | INFO     | ..............................
[2026-01-29 21:54:52] 2026-01-30 02:53:51,047 | INFO     | 
[2026-01-29 21:54:52] 2026-01-30 02:53:51,047 | INFO     | job summary report
[2026-01-29 21:54:52] 2026-01-30 02:53:51,047 | INFO     | --------------------------------------------------
[2026-01-29 21:54:52] 2026-01-30 02:53:51,047 | INFO     | PanDA job id: 6985859226
[2026-01-29 21:54:52] 2026-01-30 02:53:51,047 | INFO     | task id: 48317872
[2026-01-29 21:54:52] 2026-01-30 02:53:51,047 | INFO     | errors: (none)
[2026-01-29 21:54:52] 2026-01-30 02:53:51,047 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 21:54:52] 2026-01-30 02:53:51,048 | INFO     | pilot state: finished 
[2026-01-29 21:54:52] 2026-01-30 02:53:51,048 | INFO     | transexitcode: 0
[2026-01-29 21:54:52] 2026-01-30 02:53:51,048 | INFO     | exeerrorcode: 0
[2026-01-29 21:54:52] 2026-01-30 02:53:51,048 | INFO     | exeerrordiag: 
[2026-01-29 21:54:52] 2026-01-30 02:53:51,048 | INFO     | exitcode: 0
[2026-01-29 21:54:52] 2026-01-30 02:53:51,048 | INFO     | exitmsg: OK
[2026-01-29 21:54:52] 2026-01-30 02:53:51,048 | INFO     | cpuconsumptiontime: 41255 s
[2026-01-29 21:54:52] 2026-01-30 02:53:51,048 | INFO     | nevents: 400
[2026-01-29 21:54:52] 2026-01-30 02:53:51,048 | INFO     | neventsw: 0
[2026-01-29 21:54:52] 2026-01-30 02:53:51,048 | INFO     | pid: 264371
[2026-01-29 21:54:52] 2026-01-30 02:53:51,048 | INFO     | pgrp: 264371
[2026-01-29 21:54:52] 2026-01-30 02:53:51,049 | INFO     | corecount: 12
[2026-01-29 21:54:52] 2026-01-30 02:53:51,049 | INFO     | event service: False
[2026-01-29 21:54:52] 2026-01-30 02:53:51,049 | INFO     | sizes: {0: 2277175, 1: 2278300, 12: 2278300, 3952: 2304201, 3953: 2313213, 3957: 2313269, 3959: 2313591}
[2026-01-29 21:54:52] 2026-01-30 02:53:51,049 | INFO     | --------------------------------------------------
[2026-01-29 21:54:52] 2026-01-30 02:53:51,049 | INFO     | 
[2026-01-29 21:54:52] 2026-01-30 02:53:51,049 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-01-29 21:54:52] 2026-01-30 02:53:51,067 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,067 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,068 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,068 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,069 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 21:54:52] 2026-01-30 02:53:51,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,069 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 21:54:52] 2026-01-30 02:53:51,069 | INFO     | job 6985859226 has completed (purged errors)
[2026-01-29 21:54:52] 2026-01-30 02:53:51,070 | INFO     | overall cleanup function is called
[2026-01-29 21:54:52] 2026-01-30 02:53:52,075 | INFO     | --- collectZombieJob: --- 10, [264371]
[2026-01-29 21:54:52] 2026-01-30 02:53:52,076 | INFO     | zombie collector waiting for pid 264371
[2026-01-29 21:54:52] 2026-01-30 02:53:52,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 21:54:52] 2026-01-30 02:53:52,076 | INFO     | collected zombie processes
[2026-01-29 21:54:52] 2026-01-30 02:53:52,076 | INFO     | will attempt to kill all subprocesses of pid=264371
[2026-01-29 21:54:52] 2026-01-30 02:53:52,270 | INFO     | process IDs to be killed: [264371] (in reverse order)
[2026-01-29 21:54:52] 2026-01-30 02:53:52,330 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 21:54:52] 2026-01-30 02:53:52,330 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 21:54:52] 2026-01-30 02:53:52,339 | INFO     | did not find any defunct processes belonging to 264371
[2026-01-29 21:54:52] 2026-01-30 02:53:52,344 | INFO     | did not find any defunct processes belonging to 264371
[2026-01-29 21:54:52] 2026-01-30 02:53:52,344 | INFO     | ready for new job
[2026-01-29 21:54:52] 2026-01-30 02:53:52,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 21:54:52] 2026-01-30 02:53:52,346 | INFO     | **************************************
[2026-01-29 21:54:52] 2026-01-30 02:53:52,346 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 21:54:52] 2026-01-30 02:53:52,346 | INFO     | **************************************
[2026-01-29 21:54:52] 2026-01-30 02:53:52,346 | INFO     | 
[2026-01-29 21:54:52] 2026-01-30 02:53:52,366 | INFO     | architecture information:
[2026-01-29 21:54:52] 2026-01-30 02:53:52,367 | INFO     | executing command: cat /etc/os-release
[2026-01-29 21:54:52] 2026-01-30 02:53:52,377 | INFO     | cat /etc/os-release:
[2026-01-29 21:54:52] NAME="CentOS Linux"
[2026-01-29 21:54:52] VERSION="7 (Core)"
[2026-01-29 21:54:52] ID="centos"
[2026-01-29 21:54:52] ID_LIKE="rhel fedora"
[2026-01-29 21:54:52] VERSION_ID="7"
[2026-01-29 21:54:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 21:54:52] ANSI_COLOR="0;31"
[2026-01-29 21:54:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 21:54:52] HOME_URL="https://www.centos.org/"
[2026-01-29 21:54:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 21:54:52] 
[2026-01-29 21:54:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 21:54:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 21:54:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 21:54:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 21:54:52] 
[2026-01-29 21:54:52] 2026-01-30 02:53:52,377 | INFO     | **************************************
[2026-01-29 21:54:52] 2026-01-30 02:53:52,880 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-01-29 21:54:52] 2026-01-30 02:53:52,894 | INFO     | sufficient remaining disk space (374545055744 B)
[2026-01-29 21:54:52] 2026-01-30 02:53:52,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 21:54:52] 2026-01-30 02:53:52,894 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 21:54:52] 2026-01-30 02:53:52,894 | INFO     | update_server=False
[2026-01-29 21:54:52] 2026-01-30 02:53:52,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 21:54:52] 2026-01-30 02:53:52,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 21:54:52] 2026-01-30 02:53:52,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 21:54:52] 2026-01-30 02:53:52,944 | INFO     | aborting loop
[2026-01-29 21:54:52] 2026-01-30 02:53:53,052 | INFO     | all job control threads have been joined
[2026-01-29 21:54:52] 2026-01-30 02:53:53,248 | INFO     | all data control threads have been joined
[2026-01-29 21:54:52] 2026-01-30 02:53:53,414 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 21:54:52] 2026-01-30 02:53:53,900 | INFO     | [job] retrieve thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:53,900 | INFO     | [job] queue monitor thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:53,947 | INFO     | [job] job monitor thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:54,055 | INFO     | [job] control thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:54,251 | INFO     | [data] control thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:54,252 | INFO     | all payload control threads have been joined
[2026-01-29 21:54:52] 2026-01-30 02:53:54,439 | INFO     | [payload] validate_post thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:54,515 | INFO     | [job] validate thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:54,707 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:54,787 | INFO     | [payload] failed_post thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:54,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 21:54:52] 2026-01-30 02:53:55,015 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:55,159 | INFO     | [data] copytool_in thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:55,255 | INFO     | [payload] control thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:55,271 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:55,419 | INFO     | [data] copytool_out thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:53:58,844 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:54:02,977 | INFO     | job.realtimelogging is not enabled
[2026-01-29 21:54:52] 2026-01-30 02:54:03,979 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 21:54:52] 2026-01-30 02:54:23,734 | INFO     | PID=259498 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-29 21:54:52] 2026-01-30 02:54:23,734 | INFO     | .. there are 2 such processes running
[2026-01-29 21:54:52] 2026-01-30 02:54:23,734 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 21:54:52] 2026-01-30 02:54:23,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 21:54:52] 2026-01-30 02:54:23,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 21:54:52] 2026-01-30 02:54:46,471 | INFO     | [monitor] cgroup control has ended
[2026-01-29 21:54:52] 2026-01-30 02:54:47,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140221154080576)>', '<ExcThread(monitor, started 140220179658496)>']
[2026-01-29 21:54:52] 2026-01-30 02:54:47,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 21:54:52] 2026-01-30 02:54:47,836 | INFO     | [monitor] control thread has ended
[2026-01-29 21:54:52] 2026-01-30 02:54:52,323 | INFO     | all workflow threads have been joined
[2026-01-29 21:54:52] 2026-01-30 02:54:52,324 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 21:54:52] 2026-01-30 02:54:52,324 | INFO     | traces error code: 0
[2026-01-29 21:54:52] 2026-01-30 02:54:52,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 21:54:52] 2026-01-30 02:54:52,434 [wrapper] ==== pilot stdout END ====
[2026-01-29 21:54:52] 2026-01-30 02:54:52,435 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 21:54:52] 2026-01-30 02:54:52,437 [wrapper] pilotpid: 259498
[2026-01-29 21:54:52] 2026-01-30 02:54:52,438 [wrapper] Pilot exit status: 0
[2026-01-29 21:54:52] 2026-01-30 02:54:52,445 [wrapper] pandaids: 6985859226
[2026-01-29 21:54:52] 2026-01-30 02:54:52,475 [wrapper] cleanup supervisor_pilot  294681 259499
[2026-01-29 21:54:52] 2026-01-30 02:54:52,477 [wrapper] Test setup, not cleaning
[2026-01-29 21:54:52] 2026-01-30 02:54:52,478 [wrapper] apfmon messages muted
[2026-01-29 21:54:52] 2026-01-30 02:54:52,480 [wrapper] ==== wrapper stdout END ====
[2026-01-29 21:54:52] 2026-01-30 02:54:52,481 [wrapper] ==== wrapper stderr END ====
[2026-01-29 21:54:52]  *** Error codes and diagnostics ***
[2026-01-29 21:54:52]     "exeErrorCode": 0,
[2026-01-29 21:54:52]     "exeErrorDiag": "",
[2026-01-29 21:54:52]     "pilotErrorCode": 0,
[2026-01-29 21:54:52]     "pilotErrorDiag": "",
[2026-01-29 21:54:52]  *** Listing of results directory ***
[2026-01-29 21:54:52] total 676292
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc    584422 Jan 28 10:25 pilot3.tar.gz
[2026-01-29 21:54:52] -rwx------ 1 boinc boinc     36322 Jan 28 10:27 runpilot2-wrapper.sh
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc      5111 Jan 28 10:31 queuedata.json
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc       100 Jan 29 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 21:54:52] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 20:47 run_atlas
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc       105 Jan 29 20:47 job.xml
[2026-01-29 21:54:52] -rw-r--r-- 2 boinc boinc     15845 Jan 29 20:47 start_atlas.sh
[2026-01-29 21:54:52] drwxrwx--x 2 boinc boinc      4096 Jan 29 20:47 shared
[2026-01-29 21:54:52] -rw-r--r-- 2 boinc boinc    597759 Jan 29 20:47 input.tar.gz
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc      7579 Jan 29 20:47 init_data.xml
[2026-01-29 21:54:52] -rw-r--r-- 2 boinc boinc 497440588 Jan 29 20:47 EVNT.48317869._000152.pool.root.1
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc         0 Jan 29 20:47 boinc_lockfile
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc      2515 Jan 29 20:47 pandaJob.out
[2026-01-29 21:54:52] -rw------- 1 boinc boinc        50 Jan 29 20:47 setup.sh.local
[2026-01-29 21:54:52] -rw------- 1 boinc boinc   1009660 Jan 29 20:47 agis_schedconf.cvmfs.json
[2026-01-29 21:54:52] -rw------- 1 boinc boinc   1511668 Jan 29 20:47 agis_ddmendpoints.agis.ALL.json
[2026-01-29 21:54:52] -rw------- 1 boinc boinc       430 Jan 29 20:47 workernode_map.json
[2026-01-29 21:54:52] drwx------ 5 boinc boinc      4096 Jan 29 20:47 pilot3
[2026-01-29 21:54:52] -rw------- 1 boinc boinc 189143133 Jan 29 21:53 HITS.48317872._007605.pool.root.1
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc       530 Jan 29 21:53 boinc_task_state.xml
[2026-01-29 21:54:52] -rw------- 1 boinc boinc      1026 Jan 29 21:53 memory_monitor_summary.json
[2026-01-29 21:54:52] -rw------- 1 boinc boinc    395567 Jan 29 21:53 log.48317872._007605.job.log.tgz.1
[2026-01-29 21:54:52] -rw------- 1 boinc boinc      6342 Jan 29 21:53 heartbeat.json
[2026-01-29 21:54:52] -rw------- 1 boinc boinc        95 Jan 29 21:54 pilot_heartbeat.json
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc      8192 Jan 29 21:54 boinc_mmap_file
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc        27 Jan 29 21:54 wrapper_checkpoint.txt
[2026-01-29 21:54:52] -rw------- 1 boinc boinc      4898 Jan 29 21:54 pilotlog.txt
[2026-01-29 21:54:52] -rw------- 1 boinc boinc    601689 Jan 29 21:54 log.48317872._007605.job.log.1
[2026-01-29 21:54:52] -rw------- 1 boinc boinc       357 Jan 29 21:54 output.list
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc       620 Jan 29 21:54 runtime_log
[2026-01-29 21:54:52] -rw------- 1 boinc boinc   1013760 Jan 29 21:54 result.tar.gz
[2026-01-29 21:54:52] -rw------- 1 boinc boinc       650 Jan 29 21:54 z9kNDmSdM58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmdYGKDmRIW81m.diag
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc      9403 Jan 29 21:54 runtime_log.err
[2026-01-29 21:54:52] -rw-r--r-- 1 boinc boinc     21469 Jan 29 21:54 stderr.txt
[2026-01-29 21:54:52] HITS file was successfully produced:
[2026-01-29 21:54:52] -rw------- 1 boinc boinc 189143133 Jan 29 21:53 shared/HITS.pool.root.1
[2026-01-29 21:54:52]  *** Contents of shared directory: ***
[2026-01-29 21:54:52] total 672096
[2026-01-29 21:54:52] -rw-r--r-- 2 boinc boinc     15845 Jan 29 20:47 start_atlas.sh
[2026-01-29 21:54:52] -rw-r--r-- 2 boinc boinc    597759 Jan 29 20:47 input.tar.gz
[2026-01-29 21:54:52] -rw-r--r-- 2 boinc boinc 497440588 Jan 29 20:47 ATLAS.root_0
[2026-01-29 21:54:52] -rw------- 1 boinc boinc 189143133 Jan 29 21:53 HITS.pool.root.1
[2026-01-29 21:54:52] -rw------- 1 boinc boinc   1013760 Jan 29 21:54 result.tar.gz
21:54:53 (255106): run_atlas exited; CPU time 41315.258715
21:54:53 (255106): called boinc_finish(0)

</stderr_txt>
]]>

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