Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:55:57 (3615): wrapper (7.7.26015): starting
13:55:57 (3615): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 13:55:57] Arguments: --nthreads 8
[2026-01-29 13:55:57] Threads: 8
[2026-01-29 13:55:57] Checking for CVMFS
[2026-01-29 13:55:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 13:56:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 13:56:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 13:56:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 13:56:03] 2.11.2.0 6978 64225 136860 155641 1 93 21724799 25165824 937 130560 0 22869575 99.811 16612962 3666 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-29 13:56:03] CVMFS is ok
[2026-01-29 13:56:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 13:56:03] Checking for apptainer binary...
[2026-01-29 13:56:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 13:56:03] Running /usr/bin/apptainer --version
[2026-01-29 13:56:03] apptainer version 1.3.2-1.el7
[2026-01-29 13:56:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 13:56:34] cg-vwn361.simple-grid.lan
[2026-01-29 13:56:34] apptainer works
[2026-01-29 13:56:34] Set ATHENA_PROC_NUMBER=8
[2026-01-29 13:56:34] Set ATHENA_CORE_NUMBER=8
[2026-01-29 13:56:35] Starting ATLAS job with PandaID=6986090986
[2026-01-29 13:56:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 18:23:11]  *** The last 200 lines of the pilot log: ***
[2026-01-29 18:23:11] 2026-01-29 17:22:25,519 | INFO     | total number of processed events: 400 (read)
[2026-01-29 18:23:11] 2026-01-29 17:22:25,521 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6986090986/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 18:23:11] 2026-01-29 17:22:25,522 | INFO     | extracted standard info from prmon json
[2026-01-29 18:23:11] 2026-01-29 17:22:25,522 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 18:23:11] 2026-01-29 17:22:25,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 18:23:11] 2026-01-29 17:22:25,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 18:23:11] 2026-01-29 17:22:25,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 18:23:11] 2026-01-29 17:22:25,528 | INFO     | fitting pss+swap vs Time
[2026-01-29 18:23:11] 2026-01-29 17:22:25,529 | INFO     | sum of square deviations: 4903347750.0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,531 | INFO     | sum of deviations: 115921924925.00002
[2026-01-29 18:23:11] 2026-01-29 17:22:25,531 | INFO     | mean x: 1769699689.0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,531 | INFO     | mean y: 2430386.609561753
[2026-01-29 18:23:11] 2026-01-29 17:22:25,531 | INFO     | intersect: -41835718761.195404
[2026-01-29 18:23:11] 2026-01-29 17:22:25,532 | INFO     | chi2: 7.025962993112799
[2026-01-29 18:23:11] 2026-01-29 17:22:25,532 | INFO     | sum of square deviations: 4616114457.5
[2026-01-29 18:23:11] 2026-01-29 17:22:25,539 | INFO     | sum of deviations: 129830218060.50003
[2026-01-29 18:23:11] 2026-01-29 17:22:25,539 | INFO     | mean x: 1769699536.5
[2026-01-29 18:23:11] 2026-01-29 17:22:25,539 | INFO     | mean y: 2437628.662601626
[2026-01-29 18:23:11] 2026-01-29 17:22:25,539 | INFO     | intersect: -49771128178.84442
[2026-01-29 18:23:11] 2026-01-29 17:22:25,540 | INFO     | chi2: 6.304284742515961
[2026-01-29 18:23:11] 2026-01-29 17:22:25,540 | INFO     | current chi2=6.304284742515961 (change=10.271591969730888 %)
[2026-01-29 18:23:11] 2026-01-29 17:22:25,540 | INFO     | right removable region: 245
[2026-01-29 18:23:11] 2026-01-29 17:22:25,541 | INFO     | sum of square deviations: 4616114457.5
[2026-01-29 18:23:11] 2026-01-29 17:22:25,543 | INFO     | sum of deviations: 32768085956.999996
[2026-01-29 18:23:11] 2026-01-29 17:22:25,543 | INFO     | mean x: 1769699841.5
[2026-01-29 18:23:11] 2026-01-29 17:22:25,543 | INFO     | mean y: 2474495.2520325202
[2026-01-29 18:23:11] 2026-01-29 17:22:25,543 | INFO     | intersect: -12559968888.304659
[2026-01-29 18:23:11] 2026-01-29 17:22:25,544 | INFO     | chi2: 2.593597846892228
[2026-01-29 18:23:11] 2026-01-29 17:22:25,544 | INFO     | current chi2=2.593597846892228 (change=63.0855179648028 %)
[2026-01-29 18:23:11] 2026-01-29 17:22:25,545 | INFO     | sum of square deviations: 4340323240.0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,547 | INFO     | sum of deviations: -17085485303.000002
[2026-01-29 18:23:11] 2026-01-29 17:22:25,547 | INFO     | mean x: 1769699994.0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,547 | INFO     | mean y: 2501955.1078838175
[2026-01-29 18:23:11] 2026-01-29 17:22:25,547 | INFO     | intersect: 6968845604.251902
[2026-01-29 18:23:11] 2026-01-29 17:22:25,548 | INFO     | chi2: 0.9239525407548922
[2026-01-29 18:23:11] 2026-01-29 17:22:25,548 | INFO     | current chi2=0.9239525407548922 (change=64.37564359247074 %)
[2026-01-29 18:23:11] 2026-01-29 17:22:25,548 | INFO     | sum of square deviations: 4075741535.0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,550 | INFO     | sum of deviations: -28947083594.0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,551 | INFO     | mean x: 1769700146.5
[2026-01-29 18:23:11] 2026-01-29 17:22:25,551 | INFO     | mean y: 2508749.63559322
[2026-01-29 18:23:11] 2026-01-29 17:22:25,551 | INFO     | intersect: 12571425997.487902
[2026-01-29 18:23:11] 2026-01-29 17:22:25,551 | INFO     | chi2: 0.8023554589634341
[2026-01-29 18:23:11] 2026-01-29 17:22:25,551 | INFO     | current chi2=0.8023554589634341 (change=13.160533298832675 %)
[2026-01-29 18:23:11] 2026-01-29 17:22:25,552 | INFO     | left removable region: 30
[2026-01-29 18:23:11] 2026-01-29 17:22:25,552 | INFO     | sum of square deviations: 3081657780.0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,554 | INFO     | sum of deviations: -11245226658.0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,554 | INFO     | mean x: 1769700421.0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,554 | INFO     | mean y: 2517012.3255813955
[2026-01-29 18:23:11] 2026-01-29 17:22:25,554 | INFO     | intersect: 6460301676.17071
[2026-01-29 18:23:11] 2026-01-29 17:22:25,555 | INFO     | chi2: 0.013282534521533388
[2026-01-29 18:23:11] 2026-01-29 17:22:25,555 | INFO     | current memory leak: -3.65 B/s (using 215 data points, chi2=0.01)
[2026-01-29 18:23:11] 2026-01-29 17:22:25,555 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-29 18:23:11] 2026-01-29 17:22:25,556 | INFO     | ..............................
[2026-01-29 18:23:11] 2026-01-29 17:22:25,556 | INFO     | . Timing measurements:
[2026-01-29 18:23:11] 2026-01-29 17:22:25,556 | INFO     | . get job = 0 s
[2026-01-29 18:23:11] 2026-01-29 17:22:25,556 | INFO     | . initial setup = 120 s
[2026-01-29 18:23:11] 2026-01-29 17:22:25,556 | INFO     | . payload setup = 150 s
[2026-01-29 18:23:11] 2026-01-29 17:22:25,556 | INFO     | . stage-in = 0 s
[2026-01-29 18:23:11] 2026-01-29 17:22:25,556 | INFO     | . payload execution = 15415 s
[2026-01-29 18:23:11] 2026-01-29 17:22:25,556 | INFO     | . stage-out = 6 s
[2026-01-29 18:23:11] 2026-01-29 17:22:25,557 | INFO     | . log creation = 1 s
[2026-01-29 18:23:11] 2026-01-29 17:22:25,557 | INFO     | ..............................
[2026-01-29 18:23:11] 2026-01-29 17:22:25,701 | INFO     | 
[2026-01-29 18:23:11] 2026-01-29 17:22:25,702 | INFO     | job summary report
[2026-01-29 18:23:11] 2026-01-29 17:22:25,702 | INFO     | --------------------------------------------------
[2026-01-29 18:23:11] 2026-01-29 17:22:25,702 | INFO     | PanDA job id: 6986090986
[2026-01-29 18:23:11] 2026-01-29 17:22:25,702 | INFO     | task id: 48310620
[2026-01-29 18:23:11] 2026-01-29 17:22:25,702 | INFO     | errors: (none)
[2026-01-29 18:23:11] 2026-01-29 17:22:25,702 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 18:23:11] 2026-01-29 17:22:25,702 | INFO     | pilot state: finished 
[2026-01-29 18:23:11] 2026-01-29 17:22:25,702 | INFO     | transexitcode: 0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,702 | INFO     | exeerrorcode: 0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,703 | INFO     | exeerrordiag: 
[2026-01-29 18:23:11] 2026-01-29 17:22:25,703 | INFO     | exitcode: 0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,703 | INFO     | exitmsg: OK
[2026-01-29 18:23:11] 2026-01-29 17:22:25,703 | INFO     | cpuconsumptiontime: 55934 s
[2026-01-29 18:23:11] 2026-01-29 17:22:25,703 | INFO     | nevents: 400
[2026-01-29 18:23:11] 2026-01-29 17:22:25,703 | INFO     | neventsw: 0
[2026-01-29 18:23:11] 2026-01-29 17:22:25,703 | INFO     | pid: 12173
[2026-01-29 18:23:11] 2026-01-29 17:22:25,703 | INFO     | pgrp: 12173
[2026-01-29 18:23:11] 2026-01-29 17:22:25,703 | INFO     | corecount: 8
[2026-01-29 18:23:11] 2026-01-29 17:22:25,704 | INFO     | event service: False
[2026-01-29 18:23:11] 2026-01-29 17:22:25,704 | INFO     | sizes: {0: 2283090, 1: 2283775, 2: 2284236, 13: 2284236, 15570: 2315472, 15571: 2315471, 15577: 2325548, 15578: 2325798}
[2026-01-29 18:23:11] 2026-01-29 17:22:25,704 | INFO     | --------------------------------------------------
[2026-01-29 18:23:11] 2026-01-29 17:22:25,704 | INFO     | 
[2026-01-29 18:23:11] 2026-01-29 17:22:25,704 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-29 18:23:11] 2026-01-29 17:22:26,299 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,300 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,300 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,300 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,300 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,300 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,300 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,301 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 18:23:11] 2026-01-29 17:22:26,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,302 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 18:23:11] 2026-01-29 17:22:26,302 | INFO     | job 6986090986 has completed (purged errors)
[2026-01-29 18:23:11] 2026-01-29 17:22:26,302 | INFO     | overall cleanup function is called
[2026-01-29 18:23:11] 2026-01-29 17:22:27,311 | INFO     | --- collectZombieJob: --- 10, [12173]
[2026-01-29 18:23:11] 2026-01-29 17:22:27,311 | INFO     | zombie collector waiting for pid 12173
[2026-01-29 18:23:11] 2026-01-29 17:22:27,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 18:23:11] 2026-01-29 17:22:27,311 | INFO     | collected zombie processes
[2026-01-29 18:23:11] 2026-01-29 17:22:27,312 | INFO     | will attempt to kill all subprocesses of pid=12173
[2026-01-29 18:23:11] 2026-01-29 17:22:27,409 | INFO     | process IDs to be killed: [12173] (in reverse order)
[2026-01-29 18:23:11] 2026-01-29 17:22:27,727 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 18:23:11] 2026-01-29 17:22:27,727 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 18:23:11] 2026-01-29 17:22:27,729 | INFO     | did not find any defunct processes belonging to 12173
[2026-01-29 18:23:11] 2026-01-29 17:22:27,731 | INFO     | did not find any defunct processes belonging to 12173
[2026-01-29 18:23:11] 2026-01-29 17:22:27,731 | INFO     | ready for new job
[2026-01-29 18:23:11] 2026-01-29 17:22:27,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 18:23:11] 2026-01-29 17:22:27,733 | INFO     | **************************************
[2026-01-29 18:23:11] 2026-01-29 17:22:27,734 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 18:23:11] 2026-01-29 17:22:27,734 | INFO     | **************************************
[2026-01-29 18:23:11] 2026-01-29 17:22:27,734 | INFO     | 
[2026-01-29 18:23:11] 2026-01-29 17:22:27,734 | INFO     | pilot is running in a VM
[2026-01-29 18:23:11] 2026-01-29 17:22:27,735 | INFO     | architecture information:
[2026-01-29 18:23:11] 2026-01-29 17:22:27,736 | INFO     | executing command: cat /etc/os-release
[2026-01-29 18:23:11] 2026-01-29 17:22:27,941 | INFO     | cat /etc/os-release:
[2026-01-29 18:23:11] NAME="CentOS Linux"
[2026-01-29 18:23:11] VERSION="7 (Core)"
[2026-01-29 18:23:11] ID="centos"
[2026-01-29 18:23:11] ID_LIKE="rhel fedora"
[2026-01-29 18:23:11] VERSION_ID="7"
[2026-01-29 18:23:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 18:23:11] ANSI_COLOR="0;31"
[2026-01-29 18:23:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 18:23:11] HOME_URL="https://www.centos.org/"
[2026-01-29 18:23:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 18:23:11] 
[2026-01-29 18:23:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 18:23:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 18:23:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 18:23:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 18:23:11] 
[2026-01-29 18:23:11] 2026-01-29 17:22:27,942 | INFO     | **************************************
[2026-01-29 18:23:11] 2026-01-29 17:22:28,445 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-29 18:23:11] 2026-01-29 17:22:28,693 | INFO     | sufficient remaining disk space (494851325952 B)
[2026-01-29 18:23:11] 2026-01-29 17:22:28,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 18:23:11] 2026-01-29 17:22:28,693 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 18:23:11] 2026-01-29 17:22:28,694 | INFO     | update_server=False
[2026-01-29 18:23:11] 2026-01-29 17:22:28,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 18:23:11] 2026-01-29 17:22:28,707 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-29 18:23:11] 2026-01-29 17:22:28,707 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-29 18:23:11] 2026-01-29 17:22:28,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 18:23:11] 2026-01-29 17:22:28,708 | INFO     | will abort loop
[2026-01-29 18:23:11] 2026-01-29 17:22:29,133 | INFO     | all payload control threads have been joined
[2026-01-29 18:23:11] 2026-01-29 17:22:29,341 | INFO     | all data control threads have been joined
[2026-01-29 18:23:11] 2026-01-29 17:22:29,700 | INFO     | [job] retrieve thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:29,713 | INFO     | [job] job monitor thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:29,724 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:30,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 18:23:11] 2026-01-29 17:22:30,139 | INFO     | [payload] control thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:30,203 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:30,347 | INFO     | [data] control thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:30,403 | INFO     | all job control threads have been joined
[2026-01-29 18:23:11] 2026-01-29 17:22:30,438 | INFO     | [job] validate thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:30,497 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:30,582 | INFO     | [data] copytool_in thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:30,654 | INFO     | [payload] validate_post thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:30,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 18:23:11] 2026-01-29 17:22:30,738 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:31,087 | INFO     | [payload] failed_post thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:31,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 18:23:11] 2026-01-29 17:22:31,409 | INFO     | [job] control thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:31,722 | INFO     | [job] queue monitor thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:32,121 | INFO     | [data] copytool_out thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:35,368 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 18:23:11] 2026-01-29 17:22:58,559 | INFO     | PID=7715 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-29 18:23:11] 2026-01-29 17:22:58,559 | INFO     | .. there are 2 such processes running
[2026-01-29 18:23:11] 2026-01-29 17:22:58,560 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 18:23:11] 2026-01-29 17:22:58,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 18:23:11] 2026-01-29 17:22:58,560 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 18:23:11] 2026-01-29 17:23:00,478 | INFO     | [monitor] cgroup control has ended
[2026-01-29 18:23:11] 2026-01-29 17:23:01,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139665441707840)>', '<ExcThread(monitor, started 139664996419328)>']
[2026-01-29 18:23:11] 2026-01-29 17:23:01,578 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 18:23:11] 2026-01-29 17:23:01,578 | INFO     | [monitor] control thread has ended
[2026-01-29 18:23:11] 2026-01-29 17:23:06,570 | INFO     | all workflow threads have been joined
[2026-01-29 18:23:11] 2026-01-29 17:23:06,570 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 18:23:11] 2026-01-29 17:23:06,571 | INFO     | traces error code: 0
[2026-01-29 18:23:11] 2026-01-29 17:23:06,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 18:23:11] 2026-01-29 17:23:06,926 [wrapper] ==== pilot stdout END ====
[2026-01-29 18:23:11] 2026-01-29 17:23:07,018 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 18:23:11] 2026-01-29 17:23:07,110 [wrapper] pilotpid: 7715
[2026-01-29 18:23:11] 2026-01-29 17:23:07,208 [wrapper] Pilot exit status: 0
[2026-01-29 18:23:11] 2026-01-29 17:23:07,634 [wrapper] pandaids: 6986090986
[2026-01-29 18:23:11] 2026-01-29 17:23:08,464 [wrapper] cleanup supervisor_pilot 18933 7716
[2026-01-29 18:23:11] 2026-01-29 17:23:08,480 [wrapper] Test setup, not cleaning
[2026-01-29 18:23:11] 2026-01-29 17:23:08,484 [wrapper] apfmon messages muted
[2026-01-29 18:23:11] 2026-01-29 17:23:08,487 [wrapper] ==== wrapper stdout END ====
[2026-01-29 18:23:11] 2026-01-29 17:23:08,490 [wrapper] ==== wrapper stderr END ====
[2026-01-29 18:23:11]  *** Error codes and diagnostics ***
[2026-01-29 18:23:11]     "exeErrorCode": 0,
[2026-01-29 18:23:11]     "exeErrorDiag": "",
[2026-01-29 18:23:11]     "pilotErrorCode": 0,
[2026-01-29 18:23:11]     "pilotErrorDiag": "",
[2026-01-29 18:23:11]  *** Listing of results directory ***
[2026-01-29 18:23:11] total 720400
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc    584422 Jan 28 16:25 pilot3.tar.gz
[2026-01-29 18:23:11] -rwx------. 1 boinc boinc     36322 Jan 28 16:27 runpilot2-wrapper.sh
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc      5111 Jan 28 16:30 queuedata.json
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc       100 Jan 29 13:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 18:23:11] -rwxr-xr-x. 1 boinc boinc      7986 Jan 29 13:55 run_atlas
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc       105 Jan 29 13:55 job.xml
[2026-01-29 18:23:11] -rw-r--r--. 2 boinc boinc 531823933 Jan 29 13:55 EVNT.48310618._000026.pool.root.1
[2026-01-29 18:23:11] -rw-r--r--. 2 boinc boinc    597757 Jan 29 13:55 input.tar.gz
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc      6390 Jan 29 13:55 init_data.xml
[2026-01-29 18:23:11] -rw-r--r--. 2 boinc boinc     15845 Jan 29 13:55 start_atlas.sh
[2026-01-29 18:23:11] drwxrwx--x. 2 boinc boinc        68 Jan 29 13:55 shared
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc         0 Jan 29 13:55 boinc_lockfile
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc      2521 Jan 29 13:56 pandaJob.out
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc       415 Jan 29 14:02 workernode_map.json
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc   1010005 Jan 29 14:02 agis_schedconf.cvmfs.json
[2026-01-29 18:23:11] drwx------. 5 boinc boinc      4096 Jan 29 14:02 pilot3
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc 196609718 Jan 29 18:20 HITS.48310620._001080.pool.root.1
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc       531 Jan 29 18:21 boinc_task_state.xml
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc      1017 Jan 29 18:22 memory_monitor_summary.json
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc   1511668 Jan 29 18:22 agis_ddmendpoints.agis.ALL.json
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc    477065 Jan 29 18:22 log.48310620._001080.job.log.tgz.1
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc      6315 Jan 29 18:22 heartbeat.json
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc      8192 Jan 29 18:22 boinc_mmap_file
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc        28 Jan 29 18:22 wrapper_checkpoint.txt
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc        95 Jan 29 18:22 pilot_heartbeat.json
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc      5065 Jan 29 18:23 pilotlog.txt
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc   2188063 Jan 29 18:23 log.48310620._001080.job.log.1
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc       357 Jan 29 18:23 output.list
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc       620 Jan 29 18:23 runtime_log
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc   2682880 Jan 29 18:23 result.tar.gz
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc       656 Jan 29 18:23 zloMDm6cM58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxUGKDmjo2xKm.diag
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc      8816 Jan 29 18:23 runtime_log.err
[2026-01-29 18:23:11] -rw-r--r--. 1 boinc boinc     20718 Jan 29 18:23 stderr.txt
[2026-01-29 18:23:11] HITS file was successfully produced:
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc 196609718 Jan 29 18:20 shared/HITS.pool.root.1
[2026-01-29 18:23:11]  *** Contents of shared directory: ***
[2026-01-29 18:23:11] total 714584
[2026-01-29 18:23:11] -rw-r--r--. 2 boinc boinc 531823933 Jan 29 13:55 ATLAS.root_0
[2026-01-29 18:23:11] -rw-r--r--. 2 boinc boinc    597757 Jan 29 13:55 input.tar.gz
[2026-01-29 18:23:11] -rw-r--r--. 2 boinc boinc     15845 Jan 29 13:55 start_atlas.sh
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc 196609718 Jan 29 18:20 HITS.pool.root.1
[2026-01-29 18:23:11] -rw-------. 1 boinc boinc   2682880 Jan 29 18:23 result.tar.gz
18:23:12 (3615): run_atlas exited; CPU time 56095.490163
18:23:12 (3615): called boinc_finish(0)

</stderr_txt>
]]>

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