Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
07:09:34 (872844): wrapper (7.7.26015): starting
07:09:34 (872844): wrapper: running run_atlas (--nthreads 4)
[2026-01-29 07:09:34] Arguments: --nthreads 4
[2026-01-29 07:09:34] Threads: 4
[2026-01-29 07:09:34] Checking for CVMFS
[2026-01-29 07:09:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 07:09:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 07:09:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 07:09:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 07:09:37] 2.13.3.0 3422753 1304 51332 155641 0 50 5057296 6144000 6454 130560 0 3313743 99.998 23601 540 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-01-29 07:09:37] CVMFS is ok
[2026-01-29 07:09:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 07:09:37] Checking for apptainer binary...
[2026-01-29 07:09:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 07:09:37] Running /usr/bin/apptainer --version
[2026-01-29 07:09:37] apptainer version 1.4.5
[2026-01-29 07:09:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 07:09:37] Starfish-Cruncher
[2026-01-29 07:09:37] apptainer works
[2026-01-29 07:09:37] Set ATHENA_PROC_NUMBER=4
[2026-01-29 07:09:37] Set ATHENA_CORE_NUMBER=4
[2026-01-29 07:09:37] Starting ATLAS job with PandaID=6987907598
[2026-01-29 07:09:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 09:27:17]  *** The last 200 lines of the pilot log: ***
[2026-01-29 09:27:17] 2026-01-29 15:26:38,843 | INFO     | this job has now completed (state=finished)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,844 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,844 | INFO     | log transfer has been attempted: DONE
[2026-01-29 09:27:17] 2026-01-29 15:26:38,844 | INFO     | job 6987907598 has finished - writing final server update
[2026-01-29 09:27:17] 2026-01-29 15:26:38,844 | INFO     | total number of processed events: 400 (read)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,848 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6987907598/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,849 | INFO     | extracted standard info from prmon json
[2026-01-29 09:27:17] 2026-01-29 15:26:38,849 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 09:27:17] 2026-01-29 15:26:38,849 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 09:27:17] 2026-01-29 15:26:38,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 09:27:17] 2026-01-29 15:26:38,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 09:27:17] 2026-01-29 15:26:38,851 | INFO     | fitting pss+swap vs Time
[2026-01-29 09:27:17] 2026-01-29 15:26:38,851 | INFO     | sum of square deviations: 762879420.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,852 | INFO     | sum of deviations: 6490730010.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,852 | INFO     | mean x: 1769696304.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,852 | INFO     | mean y: 2267323.540740741
[2026-01-29 09:27:17] 2026-01-29 15:26:38,852 | INFO     | intersect: -15054661213.027834
[2026-01-29 09:27:17] 2026-01-29 15:26:38,852 | INFO     | chi2: 1.8740469340667014
[2026-01-29 09:27:17] 2026-01-29 15:26:38,852 | INFO     | sum of square deviations: 681212772.5
[2026-01-29 09:27:17] 2026-01-29 15:26:38,853 | INFO     | sum of deviations: 13625236299.499998
[2026-01-29 09:27:17] 2026-01-29 15:26:38,853 | INFO     | mean x: 1769696151.5
[2026-01-29 09:27:17] 2026-01-29 15:26:38,853 | INFO     | mean y: 2280218.6384615386
[2026-01-29 09:27:17] 2026-01-29 15:26:38,853 | INFO     | intersect: -35394190922.1067
[2026-01-29 09:27:17] 2026-01-29 15:26:38,853 | INFO     | chi2: 1.2072508221849825
[2026-01-29 09:27:17] 2026-01-29 15:26:38,853 | INFO     | current chi2=1.2072508221849825 (change=35.58054495651101 %)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,854 | INFO     | sum of square deviations: 605592750.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,854 | INFO     | sum of deviations: 12985513836.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,854 | INFO     | mean x: 1769695999.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,854 | INFO     | mean y: 2278927.904
[2026-01-29 09:27:17] 2026-01-29 15:26:38,854 | INFO     | intersect: -37944694315.30002
[2026-01-29 09:27:17] 2026-01-29 15:26:38,854 | INFO     | chi2: 1.2088194344384868
[2026-01-29 09:27:17] 2026-01-29 15:26:38,855 | INFO     | current chi2=1.2088194344384868 (change=-0.12993258937404153 %)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,855 | INFO     | right removable region: 124
[2026-01-29 09:27:17] 2026-01-29 15:26:38,855 | INFO     | sum of square deviations: 681212772.5
[2026-01-29 09:27:17] 2026-01-29 15:26:38,855 | INFO     | sum of deviations: -5086299194.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,855 | INFO     | mean x: 1769696456.5
[2026-01-29 09:27:17] 2026-01-29 15:26:38,855 | INFO     | mean y: 2288301.7538461536
[2026-01-29 09:27:17] 2026-01-29 15:26:38,855 | INFO     | intersect: 13215789315.962452
[2026-01-29 09:27:17] 2026-01-29 15:26:38,856 | INFO     | chi2: 0.6912418711330758
[2026-01-29 09:27:17] 2026-01-29 15:26:38,856 | INFO     | current chi2=0.6912418711330758 (change=63.11501816909816 %)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,856 | INFO     | sum of square deviations: 605592750.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,856 | INFO     | sum of deviations: -5463618415.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,856 | INFO     | mean x: 1769696609.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,856 | INFO     | mean y: 2289056.656
[2026-01-29 09:27:17] 2026-01-29 15:26:38,856 | INFO     | intersect: 15968376797.791368
[2026-01-29 09:27:17] 2026-01-29 15:26:38,857 | INFO     | chi2: 0.6910343793623018
[2026-01-29 09:27:17] 2026-01-29 15:26:38,857 | INFO     | current chi2=0.6910343793623018 (change=0.03001724569054687 %)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,857 | INFO     | left removable region: 20
[2026-01-29 09:27:17] 2026-01-29 15:26:38,857 | INFO     | sum of square deviations: 348769330.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,857 | INFO     | sum of deviations: 889874649.0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,857 | INFO     | mean x: 1769696578.5
[2026-01-29 09:27:17] 2026-01-29 15:26:38,857 | INFO     | mean y: 2304840.7884615385
[2026-01-29 09:27:17] 2026-01-29 15:26:38,857 | INFO     | intersect: -4513023733.628299
[2026-01-29 09:27:17] 2026-01-29 15:26:38,858 | INFO     | chi2: 7.795166882853802e-05
[2026-01-29 09:27:17] 2026-01-29 15:26:38,858 | INFO     | current memory leak: 2.55 B/s (using 104 data points, chi2=0.00)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,858 | INFO     | could have reported an average CPU frequency of 3575 MHz (8 samples)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,858 | INFO     | ..............................
[2026-01-29 09:27:17] 2026-01-29 15:26:38,858 | INFO     | . Timing measurements:
[2026-01-29 09:27:17] 2026-01-29 15:26:38,858 | INFO     | . get job = 0 s
[2026-01-29 09:27:17] 2026-01-29 15:26:38,858 | INFO     | . initial setup = 6 s
[2026-01-29 09:27:17] 2026-01-29 15:26:38,858 | INFO     | . payload setup = 4 s
[2026-01-29 09:27:17] 2026-01-29 15:26:38,858 | INFO     | . stage-in = 0 s
[2026-01-29 09:27:17] 2026-01-29 15:26:38,858 | INFO     | . payload execution = 8179 s
[2026-01-29 09:27:17] 2026-01-29 15:26:38,858 | INFO     | . stage-out = 0 s
[2026-01-29 09:27:17] 2026-01-29 15:26:38,859 | INFO     | . log creation = 0 s
[2026-01-29 09:27:17] 2026-01-29 15:26:38,859 | INFO     | ..............................
[2026-01-29 09:27:17] 2026-01-29 15:26:38,926 | INFO     | 
[2026-01-29 09:27:17] 2026-01-29 15:26:38,926 | INFO     | job summary report
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | --------------------------------------------------
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | PanDA job id: 6987907598
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | task id: 48317952
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | errors: (none)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | pilot state: finished 
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | transexitcode: 0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | exeerrorcode: 0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | exeerrordiag: 
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | exitcode: 0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | exitmsg: OK
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | cpuconsumptiontime: 31115 s
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | nevents: 400
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | neventsw: 0
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | pid: 881884
[2026-01-29 09:27:17] 2026-01-29 15:26:38,927 | INFO     | pgrp: 881884
[2026-01-29 09:27:17] 2026-01-29 15:26:38,928 | INFO     | corecount: 4
[2026-01-29 09:27:17] 2026-01-29 15:26:38,928 | INFO     | event service: False
[2026-01-29 09:27:17] 2026-01-29 15:26:38,928 | INFO     | sizes: {0: 2284040, 1: 2284274, 11: 2284274, 8187: 2312153, 8188: 2321220, 8191: 2321542}
[2026-01-29 09:27:17] 2026-01-29 15:26:38,928 | INFO     | --------------------------------------------------
[2026-01-29 09:27:17] 2026-01-29 15:26:38,928 | INFO     | 
[2026-01-29 09:27:17] 2026-01-29 15:26:38,928 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2026-01-29 09:27:17] 2026-01-29 15:26:38,945 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,947 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,947 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 09:27:17] 2026-01-29 15:26:38,947 | INFO     | job 6987907598 has completed (purged errors)
[2026-01-29 09:27:17] 2026-01-29 15:26:38,947 | INFO     | overall cleanup function is called
[2026-01-29 09:27:17] 2026-01-29 15:26:39,954 | INFO     | --- collectZombieJob: --- 10, [881884]
[2026-01-29 09:27:17] 2026-01-29 15:26:39,954 | INFO     | zombie collector waiting for pid 881884
[2026-01-29 09:27:17] 2026-01-29 15:26:39,954 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 09:27:17] 2026-01-29 15:26:39,954 | INFO     | collected zombie processes
[2026-01-29 09:27:17] 2026-01-29 15:26:39,954 | INFO     | will attempt to kill all subprocesses of pid=881884
[2026-01-29 09:27:17] 2026-01-29 15:26:40,130 | INFO     | process IDs to be killed: [881884] (in reverse order)
[2026-01-29 09:27:17] 2026-01-29 15:26:40,194 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 09:27:17] 2026-01-29 15:26:40,194 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 09:27:17] 2026-01-29 15:26:40,202 | INFO     | did not find any defunct processes belonging to 881884
[2026-01-29 09:27:17] 2026-01-29 15:26:40,207 | INFO     | did not find any defunct processes belonging to 881884
[2026-01-29 09:27:17] 2026-01-29 15:26:40,207 | INFO     | ready for new job
[2026-01-29 09:27:17] 2026-01-29 15:26:40,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 09:27:17] 2026-01-29 15:26:40,210 | INFO     | **************************************
[2026-01-29 09:27:17] 2026-01-29 15:26:40,210 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 09:27:17] 2026-01-29 15:26:40,211 | INFO     | **************************************
[2026-01-29 09:27:17] 2026-01-29 15:26:40,211 | INFO     | 
[2026-01-29 09:27:17] 2026-01-29 15:26:40,213 | INFO     | architecture information:
[2026-01-29 09:27:17] 2026-01-29 15:26:40,214 | INFO     | executing command: cat /etc/os-release
[2026-01-29 09:27:17] 2026-01-29 15:26:40,227 | INFO     | cat /etc/os-release:
[2026-01-29 09:27:17] NAME="CentOS Linux"
[2026-01-29 09:27:17] VERSION="7 (Core)"
[2026-01-29 09:27:17] ID="centos"
[2026-01-29 09:27:17] ID_LIKE="rhel fedora"
[2026-01-29 09:27:17] VERSION_ID="7"
[2026-01-29 09:27:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 09:27:17] ANSI_COLOR="0;31"
[2026-01-29 09:27:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 09:27:17] HOME_URL="https://www.centos.org/"
[2026-01-29 09:27:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 09:27:17] 
[2026-01-29 09:27:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 09:27:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 09:27:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 09:27:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 09:27:17] 
[2026-01-29 09:27:17] 2026-01-29 15:26:40,227 | INFO     | **************************************
[2026-01-29 09:27:17] 2026-01-29 15:26:40,728 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2026-01-29 09:27:17] 2026-01-29 15:26:40,740 | INFO     | sufficient remaining disk space (1791932497920 B)
[2026-01-29 09:27:17] 2026-01-29 15:26:40,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 09:27:17] 2026-01-29 15:26:40,741 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 09:27:17] 2026-01-29 15:26:40,741 | INFO     | update_server=False
[2026-01-29 09:27:17] 2026-01-29 15:26:40,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 09:27:17] 2026-01-29 15:26:40,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 09:27:17] 2026-01-29 15:26:40,741 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-29 09:27:17] 2026-01-29 15:26:40,742 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 09:27:17] 2026-01-29 15:26:40,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 09:27:17] 2026-01-29 15:26:40,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 09:27:17] 2026-01-29 15:26:40,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 09:27:17] 2026-01-29 15:26:40,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 09:27:17] 2026-01-29 15:26:40,742 | INFO     | aborting loop
[2026-01-29 09:27:17] 2026-01-29 15:26:40,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 09:27:17] 2026-01-29 15:26:41,108 | INFO     | all job control threads have been joined
[2026-01-29 09:27:17] 2026-01-29 15:26:41,120 | INFO     | all payload control threads have been joined
[2026-01-29 09:27:17] 2026-01-29 15:26:41,663 | INFO     | all data control threads have been joined
[2026-01-29 09:27:17] 2026-01-29 15:26:41,746 | INFO     | [job] retrieve thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:41,747 | INFO     | [job] queue monitor thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:41,747 | INFO     | [job] job monitor thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:41,912 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:41,982 | INFO     | [payload] validate_post thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:42,113 | INFO     | [job] control thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:42,125 | INFO     | [payload] control thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:42,374 | INFO     | [job] validate thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:42,631 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:42,642 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:42,667 | INFO     | [data] control thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:42,746 | INFO     | [data] copytool_out thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:42,811 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:42,985 | INFO     | [data] copytool_in thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:43,016 | INFO     | [payload] failed_post thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:26:44,746 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 09:27:17] 2026-01-29 15:27:10,401 | INFO     | [monitor] cgroup control has ended
[2026-01-29 09:27:17] 2026-01-29 15:27:12,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134515035277120)>', '<ExcThread(monitor, started 134514399500032)>']
[2026-01-29 09:27:17] 2026-01-29 15:27:12,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 09:27:17] 2026-01-29 15:27:12,889 | INFO     | [monitor] control thread has ended
[2026-01-29 09:27:17] 2026-01-29 15:27:17,326 | INFO     | all workflow threads have been joined
[2026-01-29 09:27:17] 2026-01-29 15:27:17,326 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 09:27:17] 2026-01-29 15:27:17,326 | INFO     | traces error code: 0
[2026-01-29 09:27:17] 2026-01-29 15:27:17,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 09:27:17] 2026-01-29 15:27:17,412 [wrapper] ==== pilot stdout END ====
[2026-01-29 09:27:17] 2026-01-29 15:27:17,414 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 09:27:17] 2026-01-29 15:27:17,416 [wrapper] pilotpid: 877153
[2026-01-29 09:27:17] 2026-01-29 15:27:17,418 [wrapper] Pilot exit status: 0
[2026-01-29 09:27:17] 2026-01-29 15:27:17,426 [wrapper] pandaids: 6987907598
[2026-01-29 09:27:17] 2026-01-29 15:27:17,465 [wrapper] cleanup supervisor_pilot 1024673 877154
[2026-01-29 09:27:17] 2026-01-29 15:27:17,468 [wrapper] Test setup, not cleaning
[2026-01-29 09:27:17] 2026-01-29 15:27:17,470 [wrapper] apfmon messages muted
[2026-01-29 09:27:17] 2026-01-29 15:27:17,473 [wrapper] ==== wrapper stdout END ====
[2026-01-29 09:27:17] 2026-01-29 15:27:17,475 [wrapper] ==== wrapper stderr END ====
[2026-01-29 09:27:17]  *** Error codes and diagnostics ***
[2026-01-29 09:27:17]     "exeErrorCode": 0,
[2026-01-29 09:27:17]     "exeErrorDiag": "",
[2026-01-29 09:27:17]     "pilotErrorCode": 0,
[2026-01-29 09:27:17]     "pilotErrorDiag": "",
[2026-01-29 09:27:17]  *** Listing of results directory ***
[2026-01-29 09:27:17] total 664912
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc    584422 Jan 28 16:30 pilot3.tar.gz
[2026-01-29 09:27:17] -rwx------ 1 boinc boinc     36322 Jan 28 16:32 runpilot2-wrapper.sh
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc      5111 Jan 28 16:33 queuedata.json
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc       100 Jan 29 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 09:27:17] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 07:09 run_atlas
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc       105 Jan 29 07:09 job.xml
[2026-01-29 09:27:17] -rw-r--r-- 2 boinc boinc 492495398 Jan 29 07:09 EVNT.48317949._000073.pool.root.1
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc      9664 Jan 29 07:09 init_data.xml
[2026-01-29 09:27:17] -rw-r--r-- 2 boinc boinc     15845 Jan 29 07:09 start_atlas.sh
[2026-01-29 09:27:17] drwxrwx--x 2 boinc boinc      4096 Jan 29 07:09 shared
[2026-01-29 09:27:17] -rw-r--r-- 2 boinc boinc    597761 Jan 29 07:09 input.tar.gz
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc         0 Jan 29 07:09 boinc_lockfile
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc      2521 Jan 29 07:09 pandaJob.out
[2026-01-29 09:27:17] -rw------- 1 boinc boinc   1010005 Jan 29 07:09 agis_schedconf.cvmfs.json
[2026-01-29 09:27:17] -rw------- 1 boinc boinc   1516246 Jan 29 07:09 agis_ddmendpoints.agis.ALL.json
[2026-01-29 09:27:17] -rw------- 1 boinc boinc       432 Jan 29 07:09 workernode_map.json
[2026-01-29 09:27:17] drwx------ 5 boinc boinc      4096 Jan 29 07:09 pilot3
[2026-01-29 09:27:17] -rw------- 1 boinc boinc        95 Jan 29 09:26 pilot_heartbeat.json
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc       530 Jan 29 09:26 boinc_task_state.xml
[2026-01-29 09:27:17] -rw------- 1 boinc boinc 181447481 Jan 29 09:26 HITS.48317952._003636.pool.root.1
[2026-01-29 09:27:17] -rw------- 1 boinc boinc      1026 Jan 29 09:26 memory_monitor_summary.json
[2026-01-29 09:27:17] -rw------- 1 boinc boinc    306522 Jan 29 09:26 log.48317952._003636.job.log.tgz.1
[2026-01-29 09:27:17] -rw------- 1 boinc boinc      6308 Jan 29 09:26 heartbeat.json
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc      8192 Jan 29 09:27 boinc_mmap_file
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc        27 Jan 29 09:27 wrapper_checkpoint.txt
[2026-01-29 09:27:17] -rw------- 1 boinc boinc      4557 Jan 29 09:27 pilotlog.txt
[2026-01-29 09:27:17] -rw------- 1 boinc boinc   1183185 Jan 29 09:27 log.48317952._003636.job.log.1
[2026-01-29 09:27:17] -rw------- 1 boinc boinc       357 Jan 29 09:27 output.list
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc       620 Jan 29 09:27 runtime_log
[2026-01-29 09:27:17] -rw------- 1 boinc boinc   1505280 Jan 29 09:27 result.tar.gz
[2026-01-29 09:27:17] -rw------- 1 boinc boinc       653 Jan 29 09:27 yYxMDmYGT58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmMNHKDm0hTurm.diag
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc      8932 Jan 29 09:27 runtime_log.err
[2026-01-29 09:27:17] -rw-r--r-- 1 boinc boinc     20648 Jan 29 09:27 stderr.txt
[2026-01-29 09:27:17] HITS file was successfully produced:
[2026-01-29 09:27:17] -rw------- 1 boinc boinc 181447481 Jan 29 09:26 shared/HITS.pool.root.1
[2026-01-29 09:27:17]  *** Contents of shared directory: ***
[2026-01-29 09:27:17] total 660232
[2026-01-29 09:27:17] -rw-r--r-- 2 boinc boinc 492495398 Jan 29 07:09 ATLAS.root_0
[2026-01-29 09:27:17] -rw-r--r-- 2 boinc boinc     15845 Jan 29 07:09 start_atlas.sh
[2026-01-29 09:27:17] -rw-r--r-- 2 boinc boinc    597761 Jan 29 07:09 input.tar.gz
[2026-01-29 09:27:17] -rw------- 1 boinc boinc 181447481 Jan 29 09:26 HITS.pool.root.1
[2026-01-29 09:27:17] -rw------- 1 boinc boinc   1505280 Jan 29 09:27 result.tar.gz
09:27:18 (872844): run_atlas exited; CPU time 31239.056843
09:27:18 (872844): called boinc_finish(0)

</stderr_txt>
]]>

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