Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-29 14:09:03 (17880): vboxwrapper version 26210
2026-01-29 14:09:03 (17880): BOINC client version: 8.2.8
2026-01-29 14:09:04 (17880): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-29 14:09:04 (17880): Successfully copied 'init_data.xml' to the shared directory.
2026-01-29 14:09:04 (17880): Create VM. (boinc_c5578b4775c4fa38, slot#9)
2026-01-29 14:09:05 (17880): Setting Memory Size for VM. (4400MB)
2026-01-29 14:09:05 (17880): Setting CPU Count for VM. (4)
2026-01-29 14:09:05 (17880): Setting Chipset Options for VM.
2026-01-29 14:09:06 (17880): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-29 14:09:06 (17880): Setting Boot Options for VM.
2026-01-29 14:09:06 (17880): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-29 14:09:07 (17880): Enabling VM Network Access.
2026-01-29 14:09:07 (17880): Disabling USB Support for VM.
2026-01-29 14:09:07 (17880): Disabling COM Port Support for VM.
2026-01-29 14:09:07 (17880): Disabling LPT Port Support for VM.
2026-01-29 14:09:08 (17880): Disabling Audio Support for VM.
2026-01-29 14:09:08 (17880): Disabling Clipboard Support for VM.
2026-01-29 14:09:08 (17880): Disabling Drag and Drop Support for VM.
2026-01-29 14:09:08 (17880): Adding storage controller(s) to VM.
2026-01-29 14:09:09 (17880): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-29 14:09:09 (17880): Adding VirtualBox Guest Additions to VM.
2026-01-29 14:09:09 (17880): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-29 14:09:10 (17880): forwarding host port 63296 to guest port 80
2026-01-29 14:09:10 (17880): Enabling remote desktop for VM.
2026-01-29 14:09:10 (17880): Enabling shared directory for VM.
2026-01-29 14:09:11 (17880): Starting VM using VBoxManage interface. (boinc_c5578b4775c4fa38, slot#9)
2026-01-29 14:09:16 (17880): Successfully started VM. (PID = '19728')
2026-01-29 14:09:16 (17880): Reporting VM Process ID to BOINC.
2026-01-29 14:09:16 (17880): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-29 14:09:16 (17880): Guest Log: CPUID EDX: 0x178bfbff
2026-01-29 14:09:16 (17880): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-29 14:09:16 (17880): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-29 14:09:16 (17880): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-29 14:09:16 (17880): Detected: Web Application Enabled (http://localhost:63296)
2026-01-29 14:09:16 (17880): Detected: Remote Desktop Enabled (localhost:63298)
2026-01-29 14:09:16 (17880): Preference change detected
2026-01-29 14:09:16 (17880): Setting CPU throttle for VM. (90%)
2026-01-29 14:09:16 (17880): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-29 14:09:18 (17880): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-29 14:09:18 (17880): Guest Log: BIOS: Booting from Hard Disk...
2026-01-29 14:09:20 (17880): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-29 14:09:20 (17880): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-29 14:09:20 (17880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-29 14:09:54 (17880): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-29 14:09:54 (17880): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-29 14:09:58 (17880): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-29 14:09:58 (17880): Guest Log: 00:00:00.000069 main     Log opened 2026-01-29T14:09:56.549204000Z
2026-01-29 14:09:58 (17880): Guest Log: 00:00:00.000144 main     OS Product: Linux
2026-01-29 14:09:58 (17880): Guest Log: 00:00:00.000160 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-29 14:09:58 (17880): Guest Log: 00:00:00.000172 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-29 14:09:58 (17880): Guest Log: 00:00:00.000185 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-29 14:09:58 (17880): Guest Log: 00:00:00.000185 main     Process ID: 1306
2026-01-29 14:09:58 (17880): Guest Log: 00:00:00.000185 main     Package type: LINUX_64BITS_GENERIC
2026-01-29 14:09:58 (17880): Guest Log: 00:00:00.000618 main     5.2.32 r132073 started. Verbose level = 0
2026-01-29 14:09:58 (17880): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-29 14:09:58 (17880): Guest Log: [INFO] Mounting shared directory
2026-01-29 14:09:58 (17880): Guest Log: [INFO] Checking for init_data.xml
2026-01-29 14:10:01 (17880): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-29 14:10:01 (17880): Guest Log: [INFO] Detected branch: prod
2026-01-29 14:10:01 (17880): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-29 14:10:01 (17880): Guest Log: Copying input files
2026-01-29 14:10:02 (17880): Guest Log: Copied input files into RunAtlas.
2026-01-29 14:10:02 (17880): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-29 14:10:02 (17880): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-29 14:10:02 (17880): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-29 14:10:02 (17880): Guest Log: Further information can be found at the LHC@home message board.
2026-01-29 14:10:08 (17880): Guest Log: 00:00:10.007748 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 620 461 633 000ns (GuestNow=1 769 692 176 094 088 000 ns GuestLast=1 769 695 796 555 721 000 ns fSetTimeLastLoop=true )
2026-01-29 14:10:10 (17880): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-29 14:10:10 (17880): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-29 14:10:10 (17880): Guest Log: 2.6.3.0 1581 0 32208 155641 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-29 14:10:10 (17880): Guest Log: copied the webapp to /var/www
2026-01-29 14:10:10 (17880): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-29 14:10:10 (17880): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-29 14:10:10 (17880): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-29 14:10:10 (17880): Guest Log:  *** Starting ATLAS job. (PandaID=6986090614 taskID=48310620) ***
2026-01-29 15:28:27 (17880): Preference change detected
2026-01-29 15:28:27 (17880): Setting CPU throttle for VM. (100%)
2026-01-29 15:28:27 (17880): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-29 15:49:20 (17880): Status Report: Elapsed Time: '6000.000000'
2026-01-29 15:49:20 (17880): Status Report: CPU Time: '20673.343750'
2026-01-29 16:19:36 (17880): Guest Log:  *** Job finished ***
2026-01-29 16:19:36 (17880): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:18:43,007 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:18:47,012 | INFO     | [data] queue_monitor thread has finished
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:06,805 | INFO     | [monitor] cgroup control has ended
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:06,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140447262807872)>', '<ExcThread(monitor, started 140446697252608)>']
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:07,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:07,039 | INFO     | [monitor] control thread has ended
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:11,879 | INFO     | all workflow threads have been joined
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:11,879 | INFO     | end of generic workflow (traces error code: 0)
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:11,879 | INFO     | traces error code: 0
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:11,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:11,953 [wrapper] ==== pilot stdout END ====
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:11,956 [wrapper] ==== wrapper stdout RESUME ====
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:11,958 [wrapper] pilotpid: 5994
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:11,960 [wrapper] Pilot exit status: 0
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:12,385 [wrapper] pandaids: 6986090614
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:12,406 [wrapper] cleanup supervisor_pilot 26039 5995
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:12,408 [wrapper] Test setup, not cleaning
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:12,411 [wrapper] apfmon messages muted
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:12,414 [wrapper] ==== wrapper stdout END ====
2026-01-29 16:19:36 (17880): Guest Log: 2026-01-29 15:19:12,416 [wrapper] ==== wrapper stderr END ====
2026-01-29 16:19:36 (17880): Guest Log:  *** Error codes and diagnostics ***
2026-01-29 16:19:36 (17880): Guest Log:     "exeErrorCode": 0,
2026-01-29 16:19:36 (17880): Guest Log:     "exeErrorDiag": "",
2026-01-29 16:19:36 (17880): Guest Log:     "pilotErrorCode": 0,
2026-01-29 16:19:36 (17880): Guest Log:     "pilotErrorDiag": "",
2026-01-29 16:19:36 (17880): Guest Log:  *** Listing of results directory ***
2026-01-29 16:19:36 (17880): Guest Log: total 201788
2026-01-29 16:19:36 (17880): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 28 15:25 runpilot2-wrapper.sh
2026-01-29 16:19:36 (17880): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 28 15:25 pilot3.tar.gz
2026-01-29 16:19:36 (17880): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 28 15:26 queuedata.json
2026-01-29 16:19:36 (17880): Guest Log: -rwxr-xr-x. 1 atlas atlas      8638 Jan 29 13:09 init_data.xml
2026-01-29 16:19:36 (17880): Guest Log: -rwxr-xr-x. 1 atlas atlas    597750 Jan 29 13:09 input.tar.gz
2026-01-29 16:19:36 (17880): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 29 13:09 start_atlas.sh
2026-01-29 16:19:36 (17880): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 29 13:09 EVNT.48310618._000021.pool.root.1 -> /data/./ATLAS.root_0
2026-01-29 16:19:36 (17880): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan 29 13:09 pandaJob.out
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas   1010005 Jan 29 13:10 agis_schedconf.cvmfs.json
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 29 13:10 agis_ddmendpoints.agis.ALL.json
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas       422 Jan 29 13:10 workernode_map.json
2026-01-29 16:19:36 (17880): Guest Log: drwx------. 5 atlas atlas      4096 Jan 29 13:10 pilot3
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas        95 Jan 29 15:17 pilot_heartbeat.json
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas 199899018 Jan 29 15:18 HITS.48310620._000862.pool.root.1
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas      1026 Jan 29 15:18 memory_monitor_summary.json
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas    340347 Jan 29 15:18 log.48310620._000862.job.log.tgz.1
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas      6329 Jan 29 15:18 heartbeat.json
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas      4608 Jan 29 15:19 pilotlog.txt
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas   1086169 Jan 29 15:19 log.48310620._000862.job.log.1
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas       357 Jan 29 15:19 output.list
2026-01-29 16:19:36 (17880): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 29 15:19 runtime_log
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas   1443840 Jan 29 15:19 result.tar.gz
2026-01-29 16:19:36 (17880): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Jan 29 15:19 runtime_log.err
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas       648 Jan 29 15:19 qqTNDmzaM58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqSGKDmG4cb6m.diag
2026-01-29 16:19:36 (17880): Guest Log: Looking for outputfile HITS.48310620._000862.pool.root.1
2026-01-29 16:19:36 (17880): Guest Log: HITS file was successfully produced
2026-01-29 16:19:36 (17880): Guest Log: -rw-------. 1 atlas atlas 199899018 Jan 29 15:18 /home/atlas/RunAtlas/HITS.48310620._000862.pool.root.1
2026-01-29 16:19:36 (17880): Guest Log: Successfully finished the ATLAS job!
2026-01-29 16:19:36 (17880): Guest Log: Copying the results back to the shared directory!
2026-01-29 16:19:36 (17880): Guest Log:  *** Contents of shared directory: ***
2026-01-29 16:19:36 (17880): Guest Log: total 714372
2026-01-29 16:19:36 (17880): Guest Log: -rwxrwxrwx. 1 root root 529542966 Jan 29 13:09 ATLAS.root_0
2026-01-29 16:19:36 (17880): Guest Log: -rwxrwxrwx. 1 root root 199899018 Jan 29  2026 HITS.pool.root.1
2026-01-29 16:19:36 (17880): Guest Log: -rwxrwxrwx. 1 root root      8638 Jan 29 13:09 init_data.xml
2026-01-29 16:19:36 (17880): Guest Log: -rwxrwxrwx. 1 root root    597750 Jan 29 04:19 input.tar.gz
2026-01-29 16:19:36 (17880): Guest Log: -rwxrwxrwx. 1 root root   1443840 Jan 29  2026 result.tar.gz
2026-01-29 16:19:36 (17880): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 29 04:19 start_atlas.sh
2026-01-29 16:19:36 (17880): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-29 16:19:36 (17880): VM Completion File Detected.
2026-01-29 16:19:36 (17880): Powering off VM.
2026-01-29 16:19:36 (17880): Successfully stopped VM.
2026-01-29 16:19:36 (17880): Deregistering VM. (boinc_c5578b4775c4fa38, slot#9)
2026-01-29 16:19:36 (17880): Removing network bandwidth throttle group from VM.
2026-01-29 16:19:37 (17880): Removing VM from VirtualBox.
2026-01-29 16:19:42 (17880): called boinc_finish(0)

</stderr_txt>
]]>

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