Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:19:22 (1877): wrapper (7.7.26015): starting
23:19:22 (1877): wrapper: running run_atlas (--nthreads 8)
[2026-01-28 23:19:22] Arguments: --nthreads 8
[2026-01-28 23:19:22] Threads: 8
[2026-01-28 23:19:22] Checking for CVMFS
[2026-01-28 23:19:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 23:19:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 23:19:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 23:19:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 23:19:23] 2.11.2.0 2843 159306 84708 155626 1 188 19057227 20275200 1 130560 0 41372272 99.818 11157489 30863 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-28 23:19:23] CVMFS is ok
[2026-01-28 23:19:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 23:19:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 23:19:23] Further information can be found at the LHC@home message board.
[2026-01-28 23:19:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 23:19:23] Checking for apptainer binary...
[2026-01-28 23:19:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 23:19:23] Running /usr/bin/apptainer --version
[2026-01-28 23:19:23] apptainer version 1.3.2-1.el7
[2026-01-28 23:19:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 23:19:25] c-204-34.aglt2.org
[2026-01-28 23:19:25] apptainer works
[2026-01-28 23:19:25] Set ATHENA_PROC_NUMBER=8
[2026-01-28 23:19:25] Set ATHENA_CORE_NUMBER=8
[2026-01-28 23:19:25] Starting ATLAS job with PandaID=6985621872
[2026-01-28 23:19:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:09:29 (1021): wrapper (7.7.26015): starting
00:09:29 (1021): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 00:09:29] Arguments: --nthreads 8
[2026-01-29 00:09:29] Threads: 8
[2026-01-29 00:09:29] This job has been restarted, cleaning up previous attempt
[2026-01-29 00:09:29] Checking for CVMFS
[2026-01-29 00:09:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 00:09:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 00:09:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 00:09:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 00:09:30] 2.11.2.0 2843 159356 84960 155626 3 188 19134946 20275200 1 130560 0 41423014 99.818 11157497 30863 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-29 00:09:30] CVMFS is ok
[2026-01-29 00:09:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 00:09:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 00:09:30] Further information can be found at the LHC@home message board.
[2026-01-29 00:09:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 00:09:30] Checking for apptainer binary...
[2026-01-29 00:09:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 00:09:30] Running /usr/bin/apptainer --version
[2026-01-29 00:09:30] apptainer version 1.3.2-1.el7
[2026-01-29 00:09:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 00:09:31] c-204-34.aglt2.org
[2026-01-29 00:09:31] apptainer works
[2026-01-29 00:09:31] Set ATHENA_PROC_NUMBER=8
[2026-01-29 00:09:31] Set ATHENA_CORE_NUMBER=8
[2026-01-29 00:09:31] Starting ATLAS job with PandaID=6985621872
[2026-01-29 00:09:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 02:16:07]  *** The last 200 lines of the pilot log: ***
[2026-01-29 02:16:07] 2026-01-29 07:15:00,755 | INFO     | sum of square deviations: 576985702.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,756 | INFO     | sum of deviations: 26530836811.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,756 | INFO     | mean x: 1769667136.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,756 | INFO     | mean y: 2747935.8943089433
[2026-01-29 02:16:07] 2026-01-29 07:15:00,756 | INFO     | intersect: -81369719063.30656
[2026-01-29 02:16:07] 2026-01-29 07:15:00,757 | INFO     | chi2: 1.475581578281815
[2026-01-29 02:16:07] 2026-01-29 07:15:00,757 | INFO     | sum of square deviations: 509440249.5
[2026-01-29 02:16:07] 2026-01-29 07:15:00,757 | INFO     | sum of deviations: 25305606396.5
[2026-01-29 02:16:07] 2026-01-29 07:15:00,758 | INFO     | mean x: 1769666983.5
[2026-01-29 02:16:07] 2026-01-29 07:15:00,758 | INFO     | mean y: 2745168.161016949
[2026-01-29 02:16:07] 2026-01-29 07:15:00,758 | INFO     | intersect: -87902551245.47162
[2026-01-29 02:16:07] 2026-01-29 07:15:00,758 | INFO     | chi2: 1.4760862269637471
[2026-01-29 02:16:07] 2026-01-29 07:15:00,758 | INFO     | current chi2=1.4760862269637471 (change=-0.03419998523699709 %)
[2026-01-29 02:16:07] 2026-01-29 07:15:00,758 | INFO     | right removable region: 117
[2026-01-29 02:16:07] 2026-01-29 07:15:00,759 | INFO     | sum of square deviations: 509440249.5
[2026-01-29 02:16:07] 2026-01-29 07:15:00,759 | INFO     | sum of deviations: 4150775378.0000005
[2026-01-29 02:16:07] 2026-01-29 07:15:00,759 | INFO     | mean x: 1769667288.5
[2026-01-29 02:16:07] 2026-01-29 07:15:00,759 | INFO     | mean y: 2797693.86440678
[2026-01-29 02:16:07] 2026-01-29 07:15:00,759 | INFO     | intersect: -14415951934.904026
[2026-01-29 02:16:07] 2026-01-29 07:15:00,760 | INFO     | chi2: 0.002183375768391773
[2026-01-29 02:16:07] 2026-01-29 07:15:00,760 | INFO     | current chi2=0.002183375768391773 (change=99.85203286619137 %)
[2026-01-29 02:16:07] 2026-01-29 07:15:00,760 | INFO     | sum of square deviations: 447383272.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,761 | INFO     | sum of deviations: 2823857872.0000005
[2026-01-29 02:16:07] 2026-01-29 07:15:00,761 | INFO     | mean x: 1769667441.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,761 | INFO     | mean y: 2800937.8053097343
[2026-01-29 02:16:07] 2026-01-29 07:15:00,761 | INFO     | intersect: -11167239711.568693
[2026-01-29 02:16:07] 2026-01-29 07:15:00,761 | INFO     | chi2: 0.00039985449008075614
[2026-01-29 02:16:07] 2026-01-29 07:15:00,761 | INFO     | current chi2=0.00039985449008075614 (change=81.68640983062295 %)
[2026-01-29 02:16:07] 2026-01-29 07:15:00,762 | INFO     | sum of square deviations: 390582207.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,762 | INFO     | sum of deviations: 2214309394.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,762 | INFO     | mean x: 1769667593.5
[2026-01-29 02:16:07] 2026-01-29 07:15:00,762 | INFO     | mean y: 2802572.407407407
[2026-01-29 02:16:07] 2026-01-29 07:15:00,763 | INFO     | intersect: -10029890945.923864
[2026-01-29 02:16:07] 2026-01-29 07:15:00,763 | INFO     | chi2: 0.00023412996039618532
[2026-01-29 02:16:07] 2026-01-29 07:15:00,763 | INFO     | current chi2=0.00023412996039618532 (change=41.44620950763876 %)
[2026-01-29 02:16:07] 2026-01-29 07:15:00,763 | INFO     | sum of square deviations: 338804492.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,764 | INFO     | sum of deviations: 1782218944.0000002
[2026-01-29 02:16:07] 2026-01-29 07:15:00,764 | INFO     | mean x: 1769667746.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,764 | INFO     | mean y: 2803843.067961165
[2026-01-29 02:16:07] 2026-01-29 07:15:00,764 | INFO     | intersect: -9306209041.882162
[2026-01-29 02:16:07] 2026-01-29 07:15:00,764 | INFO     | chi2: 0.0001766470087562992
[2026-01-29 02:16:07] 2026-01-29 07:15:00,764 | INFO     | current chi2=0.0001766470087562992 (change=24.55172825494686 %)
[2026-01-29 02:16:07] 2026-01-29 07:15:00,764 | INFO     | left removable region: 40
[2026-01-29 02:16:07] 2026-01-29 07:15:00,765 | INFO     | sum of square deviations: 141539398.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,765 | INFO     | sum of deviations: 711170452.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,765 | INFO     | mean x: 1769668173.0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,765 | INFO     | mean y: 2807043.324675325
[2026-01-29 02:16:07] 2026-01-29 07:15:00,765 | INFO     | intersect: -8888962543.560415
[2026-01-29 02:16:07] 2026-01-29 07:15:00,766 | INFO     | chi2: 8.977123612695744e-05
[2026-01-29 02:16:07] 2026-01-29 07:15:00,766 | INFO     | current memory leak: 5.02 B/s (using 77 data points, chi2=0.00)
[2026-01-29 02:16:07] 2026-01-29 07:15:00,766 | INFO     | could have reported an average CPU frequency of 1679 MHz (8 samples)
[2026-01-29 02:16:07] 2026-01-29 07:15:00,766 | INFO     | ..............................
[2026-01-29 02:16:07] 2026-01-29 07:15:00,766 | INFO     | . Timing measurements:
[2026-01-29 02:16:07] 2026-01-29 07:15:00,767 | INFO     | . get job = 0 s
[2026-01-29 02:16:07] 2026-01-29 07:15:00,767 | INFO     | . initial setup = 1 s
[2026-01-29 02:16:07] 2026-01-29 07:15:00,767 | INFO     | . payload setup = 8 s
[2026-01-29 02:16:07] 2026-01-29 07:15:00,767 | INFO     | . stage-in = 0 s
[2026-01-29 02:16:07] 2026-01-29 07:15:00,767 | INFO     | . payload execution = 7485 s
[2026-01-29 02:16:07] 2026-01-29 07:15:00,767 | INFO     | . stage-out = 0 s
[2026-01-29 02:16:07] 2026-01-29 07:15:00,767 | INFO     | . log creation = 0 s
[2026-01-29 02:16:07] 2026-01-29 07:15:00,767 | INFO     | ..............................
[2026-01-29 02:16:07] 2026-01-29 07:15:00,849 | INFO     | 
[2026-01-29 02:16:07] 2026-01-29 07:15:00,850 | INFO     | job summary report
[2026-01-29 02:16:07] 2026-01-29 07:15:00,850 | INFO     | --------------------------------------------------
[2026-01-29 02:16:07] 2026-01-29 07:15:00,850 | INFO     | PanDA job id: 6985621872
[2026-01-29 02:16:07] 2026-01-29 07:15:00,850 | INFO     | task id: 48317931
[2026-01-29 02:16:07] 2026-01-29 07:15:00,850 | INFO     | errors: (none)
[2026-01-29 02:16:07] 2026-01-29 07:15:00,851 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 02:16:07] 2026-01-29 07:15:00,851 | INFO     | pilot state: finished 
[2026-01-29 02:16:07] 2026-01-29 07:15:00,851 | INFO     | transexitcode: 0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,851 | INFO     | exeerrorcode: 0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,851 | INFO     | exeerrordiag: 
[2026-01-29 02:16:07] 2026-01-29 07:15:00,851 | INFO     | exitcode: 0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,851 | INFO     | exitmsg: OK
[2026-01-29 02:16:07] 2026-01-29 07:15:00,851 | INFO     | cpuconsumptiontime: 56271 s
[2026-01-29 02:16:07] 2026-01-29 07:15:00,852 | INFO     | nevents: 400
[2026-01-29 02:16:07] 2026-01-29 07:15:00,852 | INFO     | neventsw: 0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,852 | INFO     | pid: 7372
[2026-01-29 02:16:07] 2026-01-29 07:15:00,852 | INFO     | pgrp: 7372
[2026-01-29 02:16:07] 2026-01-29 07:15:00,852 | INFO     | corecount: 8
[2026-01-29 02:16:07] 2026-01-29 07:15:00,852 | INFO     | event service: False
[2026-01-29 02:16:07] 2026-01-29 07:15:00,852 | INFO     | sizes: {0: 2283972, 1: 2284178, 11: 2284206, 7498: 2311744, 7499: 2320742, 7501: 2321120}
[2026-01-29 02:16:07] 2026-01-29 07:15:00,853 | INFO     | --------------------------------------------------
[2026-01-29 02:16:07] 2026-01-29 07:15:00,853 | INFO     | 
[2026-01-29 02:16:07] 2026-01-29 07:15:00,853 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-29 02:16:07] 2026-01-29 07:15:00,881 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,881 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,882 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,885 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 02:16:07] 2026-01-29 07:15:00,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,885 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 02:16:07] 2026-01-29 07:15:00,885 | INFO     | job 6985621872 has completed (purged errors)
[2026-01-29 02:16:07] 2026-01-29 07:15:00,886 | INFO     | overall cleanup function is called
[2026-01-29 02:16:07] 2026-01-29 07:15:00,950 | WARNING  | process 7372 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 02:16:07] 2026-01-29 07:15:01,019 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 02:16:07] 2026-01-29 07:15:01,099 | INFO     | number of running child processes to parent process 7372: 1
[2026-01-29 02:16:07] 2026-01-29 07:15:01,099 | INFO     | maximum number of monitored processes: 6
[2026-01-29 02:16:07] 2026-01-29 07:15:01,099 | INFO     | aborting job monitoring since job object (job id=6985621872) has expired
[2026-01-29 02:16:07] 2026-01-29 07:15:01,893 | INFO     | --- collectZombieJob: --- 10, [7372]
[2026-01-29 02:16:07] 2026-01-29 07:15:01,893 | INFO     | zombie collector waiting for pid 7372
[2026-01-29 02:16:07] 2026-01-29 07:15:01,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 02:16:07] 2026-01-29 07:15:01,894 | INFO     | collected zombie processes
[2026-01-29 02:16:07] 2026-01-29 07:15:01,894 | INFO     | will attempt to kill all subprocesses of pid=7372
[2026-01-29 02:16:07] 2026-01-29 07:15:01,978 | INFO     | process IDs to be killed: [7372] (in reverse order)
[2026-01-29 02:16:07] 2026-01-29 07:15:02,040 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 02:16:07] 2026-01-29 07:15:02,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 02:16:07] 2026-01-29 07:15:02,044 | INFO     | did not find any defunct processes belonging to 7372
[2026-01-29 02:16:07] 2026-01-29 07:15:02,048 | INFO     | did not find any defunct processes belonging to 7372
[2026-01-29 02:16:07] 2026-01-29 07:15:02,048 | INFO     | ready for new job
[2026-01-29 02:16:07] 2026-01-29 07:15:02,049 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 02:16:07] 2026-01-29 07:15:02,050 | INFO     | **************************************
[2026-01-29 02:16:07] 2026-01-29 07:15:02,051 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 02:16:07] 2026-01-29 07:15:02,051 | INFO     | **************************************
[2026-01-29 02:16:07] 2026-01-29 07:15:02,051 | INFO     | 
[2026-01-29 02:16:07] 2026-01-29 07:15:02,052 | INFO     | architecture information:
[2026-01-29 02:16:07] 2026-01-29 07:15:02,052 | INFO     | executing command: cat /etc/os-release
[2026-01-29 02:16:07] 2026-01-29 07:15:02,069 | INFO     | cat /etc/os-release:
[2026-01-29 02:16:07] NAME="CentOS Linux"
[2026-01-29 02:16:07] VERSION="7 (Core)"
[2026-01-29 02:16:07] ID="centos"
[2026-01-29 02:16:07] ID_LIKE="rhel fedora"
[2026-01-29 02:16:07] VERSION_ID="7"
[2026-01-29 02:16:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 02:16:07] ANSI_COLOR="0;31"
[2026-01-29 02:16:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 02:16:07] HOME_URL="https://www.centos.org/"
[2026-01-29 02:16:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 02:16:07] 
[2026-01-29 02:16:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 02:16:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 02:16:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 02:16:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 02:16:07] 
[2026-01-29 02:16:07] 2026-01-29 07:15:02,069 | INFO     | **************************************
[2026-01-29 02:16:07] 2026-01-29 07:15:02,573 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-29 02:16:07] 2026-01-29 07:15:02,592 | INFO     | sufficient remaining disk space (17979932672 B)
[2026-01-29 02:16:07] 2026-01-29 07:15:02,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 02:16:07] 2026-01-29 07:15:02,593 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 02:16:07] 2026-01-29 07:15:02,593 | INFO     | update_server=False
[2026-01-29 02:16:07] 2026-01-29 07:15:02,593 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 02:16:07] 2026-01-29 07:15:02,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 02:16:07] 2026-01-29 07:15:02,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 02:16:07] 2026-01-29 07:15:02,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 02:16:07] 2026-01-29 07:15:02,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 02:16:07] 2026-01-29 07:15:02,595 | INFO     | aborting loop
[2026-01-29 02:16:07] 2026-01-29 07:15:03,062 | INFO     | all job control threads have been joined
[2026-01-29 02:16:07] 2026-01-29 07:15:03,198 | INFO     | all payload control threads have been joined
[2026-01-29 02:16:07] 2026-01-29 07:15:03,391 | INFO     | all data control threads have been joined
[2026-01-29 02:16:07] 2026-01-29 07:15:03,595 | INFO     | [job] retrieve thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:03,597 | INFO     | [job] job monitor thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:03,599 | INFO     | [job] queue monitor thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:03,775 | INFO     | [data] copytool_in thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:03,933 | INFO     | [payload] validate_post thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:04,063 | INFO     | [job] control thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:04,204 | INFO     | [payload] control thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:04,303 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:04,395 | INFO     | [data] control thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:04,489 | INFO     | [job] validate thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:04,571 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:04,600 | INFO     | [data] copytool_out thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:04,617 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:04,643 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:04,961 | INFO     | [payload] failed_post thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:06,601 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 02:16:07] 2026-01-29 07:15:32,383 | INFO     | PID=4817 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-29 02:16:07] 2026-01-29 07:15:32,383 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 02:16:07] 2026-01-29 07:15:32,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 02:16:07] 2026-01-29 07:15:32,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 02:16:07] 2026-01-29 07:16:00,035 | INFO     | [monitor] cgroup control has ended
[2026-01-29 02:16:07] 2026-01-29 07:16:02,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974549006144)>', '<ExcThread(monitor, started 139973940451072)>']
[2026-01-29 02:16:07] 2026-01-29 07:16:02,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 02:16:07] 2026-01-29 07:16:02,529 | INFO     | [monitor] control thread has ended
[2026-01-29 02:16:07] 2026-01-29 07:16:07,151 | INFO     | all workflow threads have been joined
[2026-01-29 02:16:07] 2026-01-29 07:16:07,151 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 02:16:07] 2026-01-29 07:16:07,151 | INFO     | traces error code: 0
[2026-01-29 02:16:07] 2026-01-29 07:16:07,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 02:16:07] 2026-01-29 07:16:07,248 [wrapper] ==== pilot stdout END ====
[2026-01-29 02:16:07] 2026-01-29 07:16:07,253 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 02:16:07] 2026-01-29 07:16:07,258 [wrapper] pilotpid: 4817
[2026-01-29 02:16:07] 2026-01-29 07:16:07,262 [wrapper] Pilot exit status: 0
[2026-01-29 02:16:07] 2026-01-29 07:16:07,279 [wrapper] pandaids: 6985621872 6985621872
[2026-01-29 02:16:07] 2026-01-29 07:16:07,331 [wrapper] cleanup supervisor_pilot 23549 4818
[2026-01-29 02:16:07] 2026-01-29 07:16:07,336 [wrapper] Test setup, not cleaning
[2026-01-29 02:16:07] 2026-01-29 07:16:07,340 [wrapper] apfmon messages muted
[2026-01-29 02:16:07] 2026-01-29 07:16:07,345 [wrapper] ==== wrapper stdout END ====
[2026-01-29 02:16:07] 2026-01-29 07:16:07,350 [wrapper] ==== wrapper stderr END ====
[2026-01-29 02:16:07]  *** Error codes and diagnostics ***
[2026-01-29 02:16:07]     "exeErrorCode": 0,
[2026-01-29 02:16:07]     "exeErrorDiag": "",
[2026-01-29 02:16:07]     "pilotErrorCode": 0,
[2026-01-29 02:16:07]     "pilotErrorDiag": "",
[2026-01-29 02:16:07]  *** Listing of results directory ***
[2026-01-29 02:16:07] total 1166008
[2026-01-29 02:16:07] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas    584422 Jan 28 08:49 pilot3.tar.gz
[2026-01-29 02:16:07] -rwx------ 1 boincer umatlas     36322 Jan 28 08:52 runpilot2-wrapper.sh
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas      5111 Jan 28 08:56 queuedata.json
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas       100 Jan 28 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 02:16:07] -rwxr-xr-x 1 boincer umatlas      7986 Jan 28 23:19 run_atlas
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas       105 Jan 28 23:19 job.xml
[2026-01-29 02:16:07] -rw-r--r-- 3 boincer umatlas 500993034 Jan 28 23:19 EVNT.48317929._000096.pool.root.1
[2026-01-29 02:16:07] -rw-r--r-- 3 boincer umatlas 500993034 Jan 28 23:19 ATLAS.root_0
[2026-01-29 02:16:07] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 23:19 start_atlas.sh
[2026-01-29 02:16:07] drwxrwx--x 2 boincer umatlas      4096 Jan 28 23:19 shared
[2026-01-29 02:16:07] -rw-r--r-- 2 boincer umatlas    597762 Jan 28 23:19 input.tar.gz
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas         0 Jan 28 23:19 boinc_lockfile
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas   1516246 Jan 28 23:19 agis_ddmendpoints.agis.ALL.json
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas      2509 Jan 29 00:09 pandaJob.out
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas        57 Jan 29 00:09 setup.sh.local
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas   1005755 Jan 29 00:09 agis_schedconf.cvmfs.json
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas       432 Jan 29 00:09 workernode_map.json
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas      5909 Jan 29 02:09 init_data.xml
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas 185156866 Jan 29 02:14 HITS.48317931._003594.pool.root.1
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas       530 Jan 29 02:14 boinc_task_state.xml
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas        96 Jan 29 02:14 pilot_heartbeat.json
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas      1045 Jan 29 02:14 memory_monitor_summary.json
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas    387439 Jan 29 02:14 log.48317931._003594.job.log.tgz.1
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas      6390 Jan 29 02:15 heartbeat.json
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas        28 Jan 29 02:15 wrapper_checkpoint.txt
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas      8192 Jan 29 02:15 boinc_mmap_file
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas      4741 Jan 29 02:16 pilotlog.txt
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas   1063118 Jan 29 02:16 log.48317931._003594.job.log.1
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas       357 Jan 29 02:16 output.list
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas       620 Jan 29 02:16 runtime_log
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas   1464320 Jan 29 02:16 result.tar.gz
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas      9426 Jan 29 02:16 runtime_log.err
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas       781 Jan 29 02:16 mPNLDmR9K58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtKGKDmjk2spn.diag
[2026-01-29 02:16:07] -rw-r--r-- 1 boincer umatlas     23137 Jan 29 02:16 stderr.txt
[2026-01-29 02:16:07] HITS file was successfully produced:
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas 185156866 Jan 29 02:14 shared/HITS.pool.root.1
[2026-01-29 02:16:07]  *** Contents of shared directory: ***
[2026-01-29 02:16:07] total 672112
[2026-01-29 02:16:07] -rw-r--r-- 3 boincer umatlas 500993034 Jan 28 23:19 ATLAS.root_0
[2026-01-29 02:16:07] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 23:19 start_atlas.sh
[2026-01-29 02:16:07] -rw-r--r-- 2 boincer umatlas    597762 Jan 28 23:19 input.tar.gz
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas 185156866 Jan 29 02:14 HITS.pool.root.1
[2026-01-29 02:16:07] -rw------- 1 boincer umatlas   1464320 Jan 29 02:16 result.tar.gz
02:16:08 (1021): run_atlas exited; CPU time 56213.357121
02:16:08 (1021): called boinc_finish(0)

</stderr_txt>
]]>

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