Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:11:53 (2829629): wrapper (7.7.26015): starting
17:11:53 (2829629): wrapper: running run_atlas (--nthreads 3)
[2026-01-29 17:11:53] Arguments: --nthreads 3
[2026-01-29 17:11:53] Threads: 3
[2026-01-29 17:11:53] Checking for CVMFS
[2026-01-29 17:11:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 17:11:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 17:11:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 17:11:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 17:11:54] 2.9.2.0 2580697 1580 74620 155645 1 50 24177179 36864001 0 130560 0 720186 99.993 28989 12670 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-29 17:11:54] CVMFS is ok
[2026-01-29 17:11:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 17:11:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 17:11:54] Further information can be found at the LHC@home message board.
[2026-01-29 17:11:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 17:11:54] Checking for apptainer binary...
[2026-01-29 17:11:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 17:11:54] Running /usr/bin/apptainer --version
[2026-01-29 17:11:54] apptainer version 1.4.1-1.1
[2026-01-29 17:11:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 17:11:54] magicA161
[2026-01-29 17:11:54] apptainer works
[2026-01-29 17:11:54] Set ATHENA_PROC_NUMBER=3
[2026-01-29 17:11:54] Set ATHENA_CORE_NUMBER=3
[2026-01-29 17:11:54] Starting ATLAS job with PandaID=6986150030
[2026-01-29 17:11:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 18:33:17]  *** The last 200 lines of the pilot log: ***
[2026-01-29 18:33:17] 2026-01-29 17:32:13,731 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 18:33:17] 2026-01-29 17:32:13,731 | INFO     | update_server=False
[2026-01-29 18:33:17] 2026-01-29 17:32:13,731 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 18:33:17] 2026-01-29 17:32:13,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 18:33:17] 2026-01-29 17:32:13,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 18:33:17] 2026-01-29 17:32:13,733 | INFO     | all payload control threads have been joined
[2026-01-29 18:33:17] 2026-01-29 17:32:13,841 | INFO     | all data control threads have been joined
[2026-01-29 18:33:17] 2026-01-29 17:32:14,186 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-29 18:33:17] 2026-01-29 17:32:14,187 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-29 18:33:17] 2026-01-29 17:32:14,187 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 18:33:17] 2026-01-29 17:32:14,187 | INFO     | will abort loop
[2026-01-29 18:33:17] 2026-01-29 17:32:14,517 | INFO     | all job control threads have been joined
[2026-01-29 18:33:17] 2026-01-29 17:32:14,737 | INFO     | [job] retrieve thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:14,737 | INFO     | [job] queue monitor thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:14,737 | INFO     | [payload] control thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:14,760 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:14,847 | INFO     | [data] control thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:14,877 | INFO     | [data] copytool_in thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:15,076 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:15,148 | INFO     | [payload] failed_post thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:15,192 | INFO     | [job] job monitor thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:15,522 | INFO     | [job] control thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:15,696 | INFO     | [payload] validate_post thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:15,738 | INFO     | [data] copytool_out thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:16,154 | INFO     | [job] validate thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:16,177 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:16,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 18:33:17] 2026-01-29 17:32:20,420 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:23,799 | INFO     | job.realtimelogging is not enabled
[2026-01-29 18:33:17] 2026-01-29 17:32:24,804 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 18:33:17] 2026-01-29 17:32:44,337 | INFO     | PID=2833669 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-29 18:33:17] 2026-01-29 17:32:44,338 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 18:33:17] 2026-01-29 17:32:44,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 18:33:17] 2026-01-29 17:32:44,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 18:33:17] 2026-01-29 17:33:10,277 | INFO     | [monitor] cgroup control has ended
[2026-01-29 18:33:17] 2026-01-29 17:33:11,879 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139939516573504)>', '<ExcThread(monitor, started 139938892871424)>']
[2026-01-29 18:33:17] 2026-01-29 17:33:12,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 18:33:17] 2026-01-29 17:33:12,484 | INFO     | [monitor] control thread has ended
[2026-01-29 18:33:17] 2026-01-29 17:33:16,895 | INFO     | all workflow threads have been joined
[2026-01-29 18:33:17] 2026-01-29 17:33:16,895 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 18:33:17] 2026-01-29 17:33:16,895 | INFO     | traces error code: 0
[2026-01-29 18:33:17] 2026-01-29 17:33:16,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 18:33:17] 2026-01-29 17:33:16,945 [wrapper] ==== pilot stdout END ====
[2026-01-29 18:33:17] 2026-01-29 17:33:16,948 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 18:33:17] 2026-01-29 17:33:16,950 [wrapper] pilotpid: 2833669
[2026-01-29 18:33:17] 2026-01-29 17:33:16,952 [wrapper] Pilot exit status: 0
[2026-01-29 18:33:17] 2026-01-29 17:33:16,959 [wrapper] pandaids: 6986150030
[2026-01-29 18:33:17] 2026-01-29 17:33:16,975 [wrapper] cleanup supervisor_pilot 2843105 2833670
[2026-01-29 18:33:17] 2026-01-29 17:33:16,977 [wrapper] Test setup, not cleaning
[2026-01-29 18:33:17] 2026-01-29 17:33:16,980 [wrapper] apfmon messages muted
[2026-01-29 18:33:17] 2026-01-29 17:33:16,982 [wrapper] ==== wrapper stdout END ====
[2026-01-29 18:33:17] 2026-01-29 17:33:16,984 [wrapper] ==== wrapper stderr END ====
[2026-01-29 18:33:17]  *** Error codes and diagnostics ***
[2026-01-29 18:33:17]     "exeErrorCode": 0,
[2026-01-29 18:33:17]     "exeErrorDiag": "",
[2026-01-29 18:33:17]     "pilotErrorCode": 0,
[2026-01-29 18:33:17]     "pilotErrorDiag": "",
[2026-01-29 18:33:17]  *** Listing of results directory ***
[2026-01-29 18:33:17] total 665352
[2026-01-29 18:33:17] -rwx------ 1 boinc boinc     36322 Jan 28 18:07 runpilot2-wrapper.sh
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc      5111 Jan 28 18:08 queuedata.json
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc    584422 Jan 28 18:08 pilot3.tar.gz
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc       100 Jan 29 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 18:33:17] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 17:11 run_atlas
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc       105 Jan 29 17:11 job.xml
[2026-01-29 18:33:17] -rw-r--r-- 2 boinc boinc 493716120 Jan 29 17:11 EVNT.48317929._000042.pool.root.1
[2026-01-29 18:33:17] -rw-r--r-- 2 boinc boinc    597758 Jan 29 17:11 input.tar.gz
[2026-01-29 18:33:17] -rw-r--r-- 2 boinc boinc     15845 Jan 29 17:11 start_atlas.sh
[2026-01-29 18:33:17] drwxrwx--x 2 boinc boinc      4096 Jan 29 17:11 shared
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc         0 Jan 29 17:11 boinc_setup_complete
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc      6448 Jan 29 17:11 init_data.xml
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc         0 Jan 29 17:11 boinc_lockfile
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc      2509 Jan 29 17:11 pandaJob.out
[2026-01-29 18:33:17] -rw------- 1 boinc boinc   1010048 Jan 29 17:12 agis_schedconf.cvmfs.json
[2026-01-29 18:33:17] -rw------- 1 boinc boinc   1511668 Jan 29 17:12 agis_ddmendpoints.agis.ALL.json
[2026-01-29 18:33:17] -rw------- 1 boinc boinc       426 Jan 29 17:12 workernode_map.json
[2026-01-29 18:33:17] drwx------ 5 boinc boinc      4096 Jan 29 17:12 pilot3
[2026-01-29 18:33:17] -rw------- 1 boinc boinc 181685780 Jan 29 18:31 HITS.48317931._004930.pool.root.1
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc       530 Jan 29 18:31 boinc_task_state.xml
[2026-01-29 18:33:17] -rw------- 1 boinc boinc      1016 Jan 29 18:32 memory_monitor_summary.json
[2026-01-29 18:33:17] -rw------- 1 boinc boinc    289080 Jan 29 18:32 log.48317931._004930.job.log.tgz.1
[2026-01-29 18:33:17] -rw------- 1 boinc boinc      6304 Jan 29 18:32 heartbeat.json
[2026-01-29 18:33:17] -rw------- 1 boinc boinc        95 Jan 29 18:32 pilot_heartbeat.json
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc      8192 Jan 29 18:32 boinc_mmap_file
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc        27 Jan 29 18:32 wrapper_checkpoint.txt
[2026-01-29 18:33:17] -rw------- 1 boinc boinc      5006 Jan 29 18:33 pilotlog.txt
[2026-01-29 18:33:17] -rw------- 1 boinc boinc    707580 Jan 29 18:33 log.48317931._004930.job.log.1
[2026-01-29 18:33:17] -rw------- 1 boinc boinc       357 Jan 29 18:33 output.list
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc       620 Jan 29 18:33 runtime_log
[2026-01-29 18:33:17] -rw------- 1 boinc boinc   1013760 Jan 29 18:33 result.tar.gz
[2026-01-29 18:33:17] -rw------- 1 boinc boinc       660 Jan 29 18:33 yhrMDm4BO58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmEkGKDmocFjan.diag
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc      8911 Jan 29 18:33 runtime_log.err
[2026-01-29 18:33:17] -rw-r--r-- 1 boinc boinc      7844 Jan 29 18:33 stderr.txt
[2026-01-29 18:33:17] HITS file was successfully produced:
[2026-01-29 18:33:17] -rw------- 1 boinc boinc 181685780 Jan 29 18:31 shared/HITS.pool.root.1
[2026-01-29 18:33:17]  *** Contents of shared directory: ***
[2026-01-29 18:33:17] total 661176
[2026-01-29 18:33:17] -rw-r--r-- 2 boinc boinc 493716120 Jan 29 17:11 ATLAS.root_0
[2026-01-29 18:33:17] -rw-r--r-- 2 boinc boinc    597758 Jan 29 17:11 input.tar.gz
[2026-01-29 18:33:17] -rw-r--r-- 2 boinc boinc     15845 Jan 29 17:11 start_atlas.sh
[2026-01-29 18:33:17] -rw------- 1 boinc boinc 181685780 Jan 29 18:31 HITS.pool.root.1
[2026-01-29 18:33:17] -rw------- 1 boinc boinc   1013760 Jan 29 18:33 result.tar.gz
18:33:18 (2829629): run_atlas exited; CPU time 13757.151008
18:33:18 (2829629): called boinc_finish(0)

</stderr_txt>
]]>

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