Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-29 13:23:07 (83497): vboxwrapper version 26210
2026-01-29 13:23:07 (83497): BOINC client version: 8.2.5
2026-01-29 13:23:07 (83497): Detected: VirtualBox VboxManage Interface (Version: 7.1.14)
2026-01-29 13:23:07 (83497): Detected: Sandbox Configuration Enabled
2026-01-29 13:23:07 (83497): Successfully copied 'init_data.xml' to the shared directory.
2026-01-29 13:23:07 (83497): Create VM. (boinc_90fa434f4fa6e627, slot#0)
2026-01-29 13:23:07 (83497): Setting Memory Size for VM. (4100MB)
2026-01-29 13:23:07 (83497): Setting CPU Count for VM. (1)
2026-01-29 13:23:07 (83497): Setting Chipset Options for VM.
2026-01-29 13:23:07 (83497): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-29 13:23:07 (83497): Setting Boot Options for VM.
2026-01-29 13:23:08 (83497): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-29 13:23:08 (83497): Enabling VM Network Access.
2026-01-29 13:23:08 (83497): Disabling USB Support for VM.
2026-01-29 13:23:08 (83497): Disabling COM Port Support for VM.
2026-01-29 13:23:08 (83497): Disabling Audio Support for VM.
2026-01-29 13:23:08 (83497): Disabling Clipboard Support for VM.
2026-01-29 13:23:08 (83497): Disabling Drag and Drop Support for VM.
2026-01-29 13:23:08 (83497): Adding storage controller(s) to VM.
2026-01-29 13:23:08 (83497): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-29 13:23:08 (83497): Adding VirtualBox Guest Additions to VM.
2026-01-29 13:23:08 (83497): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-29 13:23:09 (83497): forwarding host port 63040 to guest port 80
2026-01-29 13:23:09 (83497): Enabling remote desktop for VM.
2026-01-29 13:23:09 (83497): Required extension pack not installed, remote desktop not enabled.
2026-01-29 13:23:09 (83497): Enabling shared directory for VM.
2026-01-29 13:23:09 (83497): Starting VM using VBoxManage interface. (boinc_90fa434f4fa6e627, slot#0)
2026-01-29 13:23:13 (83497): Successfully started VM. (PID = '83572')
2026-01-29 13:23:13 (83497): Reporting VM Process ID to BOINC.
2026-01-29 13:23:13 (83497): Guest Log: BIOS: VirtualBox 7.1.14
2026-01-29 13:23:13 (83497): Guest Log: CPUID EDX: 0x178bfbff
2026-01-29 13:23:13 (83497): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-29 13:23:13 (83497): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-29 13:23:13 (83497): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-29 13:23:13 (83497): Detected: Web Application Enabled (http://localhost:63040)
2026-01-29 13:23:13 (83497): Preference change detected
2026-01-29 13:23:13 (83497): Setting CPU throttle for VM. (100%)
2026-01-29 13:23:13 (83497): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-29 13:23:15 (83497): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-29 13:23:15 (83497): Guest Log: BIOS: Booting from Hard Disk...
2026-01-29 13:23:18 (83497): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-29 13:23:18 (83497): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-29 13:23:18 (83497): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-29 13:23:25 (83497): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-29 13:23:25 (83497): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-29 13:23:37 (83497): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-29 13:23:37 (83497): Guest Log: 00:00:00.000181 main     Log opened 2026-01-29T02:23:34.786551000Z
2026-01-29 13:23:37 (83497): Guest Log: 00:00:00.000295 main     OS Product: Linux
2026-01-29 13:23:37 (83497): Guest Log: 00:00:00.000344 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-29 13:23:37 (83497): Guest Log: 00:00:00.000388 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-29 13:23:37 (83497): Guest Log: 00:00:00.000434 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-29 13:23:37 (83497): Guest Log: 00:00:00.000435 main     Process ID: 1259
2026-01-29 13:23:37 (83497): Guest Log: 00:00:00.000435 main     Package type: LINUX_64BITS_GENERIC
2026-01-29 13:23:37 (83497): Guest Log: 00:00:00.002386 main     5.2.32 r132073 started. Verbose level = 0
2026-01-29 13:23:37 (83497): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-29 13:23:37 (83497): Guest Log: [INFO] Mounting shared directory
2026-01-29 13:23:37 (83497): Guest Log: [INFO] Checking for init_data.xml
2026-01-29 13:23:52 (83497): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-29 13:23:52 (83497): Guest Log: [INFO] Detected branch: prod
2026-01-29 13:23:52 (83497): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-29 13:23:52 (83497): Guest Log: Copying input files
2026-01-29 13:23:59 (83497): Guest Log: Copied input files into RunAtlas.
2026-01-29 13:23:59 (83497): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-29 13:23:59 (83497): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-29 13:23:59 (83497): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-29 13:23:59 (83497): Guest Log: Further information can be found at the LHC@home message board.
2026-01-29 13:24:13 (83497): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-29 13:24:14 (83497): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-29 13:24:14 (83497): Guest Log: 2.6.3.0 1533 0 30128 155626 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-29 13:24:15 (83497): Guest Log: copied the webapp to /var/www
2026-01-29 13:24:15 (83497): Guest Log: core_number=1
2026-01-29 13:24:16 (83497): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-29 13:24:16 (83497): Guest Log:  *** Starting ATLAS job. (PandaID=6984627277 taskID=48318010) ***
2026-01-29 15:03:13 (83497): Status Report: Elapsed Time: '6000.000000'
2026-01-29 15:03:13 (83497): Status Report: CPU Time: '5733.240000'
2026-01-29 16:43:14 (83497): Status Report: Elapsed Time: '12000.000000'
2026-01-29 16:43:14 (83497): Status Report: CPU Time: '11717.990000'
2026-01-29 18:23:14 (83497): Status Report: Elapsed Time: '18000.000000'
2026-01-29 18:23:14 (83497): Status Report: CPU Time: '17687.030000'
2026-01-29 20:03:15 (83497): Status Report: Elapsed Time: '24000.000000'
2026-01-29 20:03:15 (83497): Status Report: CPU Time: '23663.690000'
2026-01-29 21:43:15 (83497): Status Report: Elapsed Time: '30000.000000'
2026-01-29 21:43:15 (83497): Status Report: CPU Time: '29650.800000'
2026-01-29 22:27:56 (83497): Guest Log:  *** Job finished ***
2026-01-29 22:27:56 (83497): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:36,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:36,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:42,089 | INFO     | [monitor] cgroup control has ended
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:43,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139900359206720)>', '<ExcThread(monitor, started 139899701294848)>']
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:44,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:44,083 | INFO     | [monitor] control thread has ended
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:48,717 | INFO     | all workflow threads have been joined
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:48,717 | INFO     | end of generic workflow (traces error code: 0)
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:48,717 | INFO     | traces error code: 0
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:48,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:48,812 [wrapper] ==== pilot stdout END ====
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:48,817 [wrapper] ==== wrapper stdout RESUME ====
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:48,822 [wrapper] pilotpid: 5896
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:48,826 [wrapper] Pilot exit status: 0
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:49,505 [wrapper] pandaids: 6984627277
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:49,528 [wrapper] cleanup supervisor_pilot   962 5897
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:49,533 [wrapper] Test setup, not cleaning
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:49,537 [wrapper] apfmon messages muted
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:49,542 [wrapper] ==== wrapper stdout END ====
2026-01-29 22:27:56 (83497): Guest Log: 2026-01-29 11:26:49,547 [wrapper] ==== wrapper stderr END ====
2026-01-29 22:27:57 (83497): Guest Log:  *** Error codes and diagnostics ***
2026-01-29 22:27:57 (83497): Guest Log:     "exeErrorCode": 0,
2026-01-29 22:27:57 (83497): Guest Log:     "exeErrorDiag": "",
2026-01-29 22:27:57 (83497): Guest Log:     "pilotErrorCode": 0,
2026-01-29 22:27:57 (83497): Guest Log:     "pilotErrorDiag": "",
2026-01-29 22:27:57 (83497): Guest Log:  *** Listing of results directory ***
2026-01-29 22:27:57 (83497): Guest Log: total 193008
2026-01-29 22:27:57 (83497): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 28 20:38 pilot3.tar.gz
2026-01-29 22:27:57 (83497): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 28 20:42 runpilot2-wrapper.sh
2026-01-29 22:27:57 (83497): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 28 20:45 queuedata.json
2026-01-29 22:27:57 (83497): Guest Log: -rw-r-----. 1 atlas atlas     15845 Jan 29 02:23 start_atlas.sh
2026-01-29 22:27:57 (83497): Guest Log: -rw-r-----. 1 atlas atlas    597762 Jan 29 02:23 input.tar.gz
2026-01-29 22:27:57 (83497): Guest Log: -rw-r--r--. 1 atlas atlas      7501 Jan 29 02:23 init_data.xml
2026-01-29 22:27:57 (83497): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 29 02:23 EVNT.48318008._000022.pool.root.1 -> /data/./ATLAS.root_0
2026-01-29 22:27:57 (83497): Guest Log: -rw-r--r--. 1 atlas atlas      2523 Jan 29 02:24 pandaJob.out
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas   1005755 Jan 29 02:26 agis_schedconf.cvmfs.json
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas       410 Jan 29 02:26 workernode_map.json
2026-01-29 22:27:57 (83497): Guest Log: drwx------. 5 atlas atlas      4096 Jan 29 02:26 pilot3
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas 183663482 Jan 29 11:25 HITS.48318010._001420.pool.root.1
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas      1027 Jan 29 11:25 memory_monitor_summary.json
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 29 11:25 agis_ddmendpoints.agis.ALL.json
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas    638297 Jan 29 11:25 log.48318010._001420.job.log.tgz.1
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas      6318 Jan 29 11:26 heartbeat.json
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas        95 Jan 29 11:26 pilot_heartbeat.json
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 29 11:26 pilotlog.txt
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas   4416205 Jan 29 11:26 log.48318010._001420.job.log.1
2026-01-29 22:27:57 (83497): Guest Log: -rw-r--r--. 1 atlas atlas      8675 Jan 29 11:26 runtime_log.err
2026-01-29 22:27:57 (83497): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 29 11:26 runtime_log
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas   5068800 Jan 29 11:26 result.tar.gz
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas       357 Jan 29 11:26 output.list
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas       674 Jan 29 11:26 CyBNDmIYR58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYEHKDmdnUUtn.diag
2026-01-29 22:27:57 (83497): Guest Log: Looking for outputfile HITS.48318010._001420.pool.root.1
2026-01-29 22:27:57 (83497): Guest Log: HITS file was successfully produced
2026-01-29 22:27:57 (83497): Guest Log: -rw-------. 1 atlas atlas 183663482 Jan 29 11:25 /home/atlas/RunAtlas/HITS.48318010._001420.pool.root.1
2026-01-29 22:27:57 (83497): Guest Log: Successfully finished the ATLAS job!
2026-01-29 22:27:57 (83497): Guest Log: Copying the results back to the shared directory!
2026-01-29 22:27:57 (83497): Guest Log:  *** Contents of shared directory: ***
2026-01-29 22:27:57 (83497): Guest Log: total 505496
2026-01-29 22:27:57 (83497): Guest Log: -rw-rw----. 1 root root 495781671 Jan 29 02:23 ATLAS.root_0
2026-01-29 22:27:57 (83497): Guest Log: -rw-rw-r--. 1 root root      7501 Jan 29 02:23 init_data.xml
2026-01-29 22:27:57 (83497): Guest Log: -rw-rw----. 1 root root    597762 Jan 29 02:23 input.tar.gz
2026-01-29 22:27:57 (83497): Guest Log: -rw-r--r--. 1 root root   5068800 Jan 29  2026 result.tar.gz
2026-01-29 22:27:57 (83497): Guest Log: -rw-rw----. 1 root root     15845 Jan 29 02:23 start_atlas.sh
2026-01-29 22:27:57 (83497): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-29 22:27:57 (83497): VM Completion File Detected.
2026-01-29 22:27:57 (83497): Powering off VM.
2026-01-29 22:27:58 (83497): Successfully stopped VM.
2026-01-29 22:27:58 (83497): Deregistering VM. (boinc_90fa434f4fa6e627, slot#0)
2026-01-29 22:27:58 (83497): Removing network bandwidth throttle group from VM.
2026-01-29 22:27:58 (83497): Removing VM from VirtualBox.
2026-01-29 22:28:03 (83497): called boinc_finish(0)

</stderr_txt>
]]>

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