Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:29:07 (29363): wrapper (7.7.26015): starting
09:29:07 (29363): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 09:29:07] Arguments: --nthreads 8
[2026-01-29 09:29:07] Threads: 8
[2026-01-29 09:29:07] Checking for CVMFS
[2026-01-29 09:29:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 09:29:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 09:29:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 09:29:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 09:29:13] 2.11.2.0 18604 63967 133720 155626 1 264 24759976 25165825 939 130560 0 22607672 99.839 15201467 3162 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-29 09:29:13] CVMFS is ok
[2026-01-29 09:29:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 09:29:13] Checking for apptainer binary...
[2026-01-29 09:29:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 09:29:13] Running /usr/bin/apptainer --version
[2026-01-29 09:29:13] apptainer version 1.3.2-1.el7
[2026-01-29 09:29:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 09:29:36] cg-vwn461.simple-grid.lan
[2026-01-29 09:29:36] apptainer works
[2026-01-29 09:29:36] Set ATHENA_PROC_NUMBER=8
[2026-01-29 09:29:36] Set ATHENA_CORE_NUMBER=8
[2026-01-29 09:29:36] Starting ATLAS job with PandaID=6987876724
[2026-01-29 09:29:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 13:53:32]  *** The last 200 lines of the pilot log: ***
[2026-01-29 13:53:32] 2026-01-29 12:52:48,700 | INFO     | log transfer has been attempted: DONE
[2026-01-29 13:53:32] 2026-01-29 12:52:48,700 | INFO     | job 6987876724 has finished - writing final server update
[2026-01-29 13:53:32] 2026-01-29 12:52:48,701 | INFO     | total number of processed events: 400 (read)
[2026-01-29 13:53:32] 2026-01-29 12:52:48,702 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6987876724/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 13:53:32] 2026-01-29 12:52:48,703 | INFO     | extracted standard info from prmon json
[2026-01-29 13:53:32] 2026-01-29 12:52:48,703 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 13:53:32] 2026-01-29 12:52:48,703 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 13:53:32] 2026-01-29 12:52:48,704 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 13:53:32] 2026-01-29 12:52:48,704 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 13:53:32] 2026-01-29 12:52:48,708 | INFO     | fitting pss+swap vs Time
[2026-01-29 13:53:32] 2026-01-29 12:52:48,709 | INFO     | sum of square deviations: 4787066500.0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,711 | INFO     | sum of deviations: 76544300477.99998
[2026-01-29 13:53:32] 2026-01-29 12:52:48,711 | INFO     | mean x: 1769683589.0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,711 | INFO     | mean y: 2443089.514056225
[2026-01-29 13:53:32] 2026-01-29 12:52:48,711 | INFO     | intersect: -28294467427.06252
[2026-01-29 13:53:32] 2026-01-29 12:52:48,712 | INFO     | chi2: 6.816143839013667
[2026-01-29 13:53:32] 2026-01-29 12:52:48,712 | INFO     | sum of square deviations: 4504437945.0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,714 | INFO     | sum of deviations: 91054747976.5
[2026-01-29 13:53:32] 2026-01-29 12:52:48,715 | INFO     | mean x: 1769683436.5
[2026-01-29 13:53:32] 2026-01-29 12:52:48,715 | INFO     | mean y: 2450775.3975409837
[2026-01-29 13:53:32] 2026-01-29 12:52:48,715 | INFO     | intersect: -35770731423.18505
[2026-01-29 13:53:32] 2026-01-29 12:52:48,715 | INFO     | chi2: 6.103706669160442
[2026-01-29 13:53:32] 2026-01-29 12:52:48,715 | INFO     | current chi2=6.103706669160442 (change=10.45220269231171 %)
[2026-01-29 13:53:32] 2026-01-29 12:52:48,716 | INFO     | right removable region: 243
[2026-01-29 13:53:32] 2026-01-29 12:52:48,716 | INFO     | sum of square deviations: 4504437945.0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,718 | INFO     | sum of deviations: -6200016881.0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,718 | INFO     | mean x: 1769683741.5
[2026-01-29 13:53:32] 2026-01-29 12:52:48,718 | INFO     | mean y: 2487693.5327868853
[2026-01-29 13:53:32] 2026-01-29 12:52:48,718 | INFO     | intersect: 2438323019.7826285
[2026-01-29 13:53:32] 2026-01-29 12:52:48,719 | INFO     | chi2: 2.367150688663717
[2026-01-29 13:53:32] 2026-01-29 12:52:48,719 | INFO     | current chi2=2.367150688663717 (change=65.27140939845165 %)
[2026-01-29 13:53:32] 2026-01-29 12:52:48,719 | INFO     | sum of square deviations: 4233158440.0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,721 | INFO     | sum of deviations: -48414086916.0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,721 | INFO     | mean x: 1769683894.0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,722 | INFO     | mean y: 2511283.6861924687
[2026-01-29 13:53:32] 2026-01-29 12:52:48,722 | INFO     | intersect: 20242157654.673744
[2026-01-29 13:53:32] 2026-01-29 12:52:48,722 | INFO     | chi2: 0.9608322140480878
[2026-01-29 13:53:32] 2026-01-29 12:52:48,722 | INFO     | current chi2=0.9608322140480878 (change=59.409757112231475 %)
[2026-01-29 13:53:32] 2026-01-29 12:52:48,723 | INFO     | sum of square deviations: 3972995422.5
[2026-01-29 13:53:32] 2026-01-29 12:52:48,725 | INFO     | sum of deviations: -45781929809.5
[2026-01-29 13:53:32] 2026-01-29 12:52:48,725 | INFO     | mean x: 1769684046.5
[2026-01-29 13:53:32] 2026-01-29 12:52:48,725 | INFO     | mean y: 2509709.2606837605
[2026-01-29 13:53:32] 2026-01-29 12:52:48,725 | INFO     | intersect: 20395070532.0148
[2026-01-29 13:53:32] 2026-01-29 12:52:48,725 | INFO     | chi2: 0.9465901622506935
[2026-01-29 13:53:32] 2026-01-29 12:52:48,726 | INFO     | current chi2=0.9465901622506935 (change=1.4822621045761026 %)
[2026-01-29 13:53:32] 2026-01-29 12:52:48,726 | INFO     | left removable region: 30
[2026-01-29 13:53:32] 2026-01-29 12:52:48,726 | INFO     | sum of square deviations: 2996454322.0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,728 | INFO     | sum of deviations: -5348257166.999998
[2026-01-29 13:53:32] 2026-01-29 12:52:48,728 | INFO     | mean x: 1769684321.0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,728 | INFO     | mean y: 2502969.244131455
[2026-01-29 13:53:32] 2026-01-29 12:52:48,728 | INFO     | intersect: 3161145096.249255
[2026-01-29 13:53:32] 2026-01-29 12:52:48,728 | INFO     | chi2: 0.061116829422916005
[2026-01-29 13:53:32] 2026-01-29 12:52:48,729 | INFO     | current memory leak: -1.78 B/s (using 213 data points, chi2=0.06)
[2026-01-29 13:53:32] 2026-01-29 12:52:48,729 | INFO     | could have reported an average CPU frequency of 2250 MHz (12 samples)
[2026-01-29 13:53:32] 2026-01-29 12:52:48,729 | INFO     | ..............................
[2026-01-29 13:53:32] 2026-01-29 12:52:48,729 | INFO     | . Timing measurements:
[2026-01-29 13:53:32] 2026-01-29 12:52:48,730 | INFO     | . get job = 0 s
[2026-01-29 13:53:32] 2026-01-29 12:52:48,730 | INFO     | . initial setup = 126 s
[2026-01-29 13:53:32] 2026-01-29 12:52:48,730 | INFO     | . payload setup = 143 s
[2026-01-29 13:53:32] 2026-01-29 12:52:48,730 | INFO     | . stage-in = 0 s
[2026-01-29 13:53:32] 2026-01-29 12:52:48,730 | INFO     | . payload execution = 15256 s
[2026-01-29 13:53:32] 2026-01-29 12:52:48,730 | INFO     | . stage-out = 5 s
[2026-01-29 13:53:32] 2026-01-29 12:52:48,730 | INFO     | . log creation = 1 s
[2026-01-29 13:53:32] 2026-01-29 12:52:48,730 | INFO     | ..............................
[2026-01-29 13:53:32] 2026-01-29 12:52:48,843 | INFO     | 
[2026-01-29 13:53:32] 2026-01-29 12:52:48,843 | INFO     | job summary report
[2026-01-29 13:53:32] 2026-01-29 12:52:48,843 | INFO     | --------------------------------------------------
[2026-01-29 13:53:32] 2026-01-29 12:52:48,844 | INFO     | PanDA job id: 6987876724
[2026-01-29 13:53:32] 2026-01-29 12:52:48,844 | INFO     | task id: 48317952
[2026-01-29 13:53:32] 2026-01-29 12:52:48,844 | INFO     | errors: (none)
[2026-01-29 13:53:32] 2026-01-29 12:52:48,844 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 13:53:32] 2026-01-29 12:52:48,844 | INFO     | pilot state: finished 
[2026-01-29 13:53:32] 2026-01-29 12:52:48,844 | INFO     | transexitcode: 0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,844 | INFO     | exeerrorcode: 0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,844 | INFO     | exeerrordiag: 
[2026-01-29 13:53:32] 2026-01-29 12:52:48,844 | INFO     | exitcode: 0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,845 | INFO     | exitmsg: OK
[2026-01-29 13:53:32] 2026-01-29 12:52:48,845 | INFO     | cpuconsumptiontime: 55840 s
[2026-01-29 13:53:32] 2026-01-29 12:52:48,845 | INFO     | nevents: 400
[2026-01-29 13:53:32] 2026-01-29 12:52:48,845 | INFO     | neventsw: 0
[2026-01-29 13:53:32] 2026-01-29 12:52:48,845 | INFO     | pid: 5515
[2026-01-29 13:53:32] 2026-01-29 12:52:48,845 | INFO     | pgrp: 5515
[2026-01-29 13:53:32] 2026-01-29 12:52:48,845 | INFO     | corecount: 8
[2026-01-29 13:53:32] 2026-01-29 12:52:48,845 | INFO     | event service: False
[2026-01-29 13:53:32] 2026-01-29 12:52:48,845 | INFO     | sizes: {0: 2283151, 1: 2284210, 2: 2284298, 15404: 2315407, 15410: 2324407, 15411: 2324785}
[2026-01-29 13:53:32] 2026-01-29 12:52:48,845 | INFO     | --------------------------------------------------
[2026-01-29 13:53:32] 2026-01-29 12:52:48,846 | INFO     | 
[2026-01-29 13:53:32] 2026-01-29 12:52:48,846 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2026-01-29 13:53:32] 2026-01-29 12:52:49,399 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,400 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,400 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,400 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,401 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,401 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 13:53:32] 2026-01-29 12:52:49,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,401 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 13:53:32] 2026-01-29 12:52:49,402 | INFO     | job 6987876724 has completed (purged errors)
[2026-01-29 13:53:32] 2026-01-29 12:52:49,402 | INFO     | overall cleanup function is called
[2026-01-29 13:53:32] 2026-01-29 12:52:50,411 | INFO     | --- collectZombieJob: --- 10, [5515]
[2026-01-29 13:53:32] 2026-01-29 12:52:50,411 | INFO     | zombie collector waiting for pid 5515
[2026-01-29 13:53:32] 2026-01-29 12:52:50,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 13:53:32] 2026-01-29 12:52:50,411 | INFO     | collected zombie processes
[2026-01-29 13:53:32] 2026-01-29 12:52:50,411 | INFO     | will attempt to kill all subprocesses of pid=5515
[2026-01-29 13:53:32] 2026-01-29 12:52:50,497 | INFO     | process IDs to be killed: [5515] (in reverse order)
[2026-01-29 13:53:32] 2026-01-29 12:52:51,589 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 13:53:32] 2026-01-29 12:52:51,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 13:53:32] 2026-01-29 12:52:51,592 | INFO     | did not find any defunct processes belonging to 5515
[2026-01-29 13:53:32] 2026-01-29 12:52:51,593 | INFO     | did not find any defunct processes belonging to 5515
[2026-01-29 13:53:32] 2026-01-29 12:52:51,594 | INFO     | ready for new job
[2026-01-29 13:53:32] 2026-01-29 12:52:51,594 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 13:53:32] 2026-01-29 12:52:51,596 | INFO     | **************************************
[2026-01-29 13:53:32] 2026-01-29 12:52:51,596 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 13:53:32] 2026-01-29 12:52:51,596 | INFO     | **************************************
[2026-01-29 13:53:32] 2026-01-29 12:52:51,596 | INFO     | 
[2026-01-29 13:53:32] 2026-01-29 12:52:51,597 | INFO     | pilot is running in a VM
[2026-01-29 13:53:32] 2026-01-29 12:52:51,597 | INFO     | architecture information:
[2026-01-29 13:53:32] 2026-01-29 12:52:51,603 | INFO     | executing command: cat /etc/os-release
[2026-01-29 13:53:32] 2026-01-29 12:52:51,903 | INFO     | cat /etc/os-release:
[2026-01-29 13:53:32] NAME="CentOS Linux"
[2026-01-29 13:53:32] VERSION="7 (Core)"
[2026-01-29 13:53:32] ID="centos"
[2026-01-29 13:53:32] ID_LIKE="rhel fedora"
[2026-01-29 13:53:32] VERSION_ID="7"
[2026-01-29 13:53:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 13:53:32] ANSI_COLOR="0;31"
[2026-01-29 13:53:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 13:53:32] HOME_URL="https://www.centos.org/"
[2026-01-29 13:53:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 13:53:32] 
[2026-01-29 13:53:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 13:53:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 13:53:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 13:53:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 13:53:32] 
[2026-01-29 13:53:32] 2026-01-29 12:52:51,903 | INFO     | **************************************
[2026-01-29 13:53:32] 2026-01-29 12:52:52,407 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2026-01-29 13:53:32] 2026-01-29 12:52:52,683 | INFO     | sufficient remaining disk space (496018391040 B)
[2026-01-29 13:53:32] 2026-01-29 12:52:52,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 13:53:32] 2026-01-29 12:52:52,684 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 13:53:32] 2026-01-29 12:52:52,684 | INFO     | update_server=False
[2026-01-29 13:53:32] 2026-01-29 12:52:52,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 13:53:32] 2026-01-29 12:52:52,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 13:53:32] 2026-01-29 12:52:52,685 | INFO     | aborting loop
[2026-01-29 13:53:32] 2026-01-29 12:52:53,614 | INFO     | all job control threads have been joined
[2026-01-29 13:53:32] 2026-01-29 12:52:53,690 | INFO     | [job] retrieve thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:53,691 | INFO     | [job] job monitor thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:53,696 | INFO     | all data control threads have been joined
[2026-01-29 13:53:32] 2026-01-29 12:52:53,794 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:53,808 | INFO     | [payload] failed_post thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:53,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 13:53:32] 2026-01-29 12:52:53,928 | INFO     | all payload control threads have been joined
[2026-01-29 13:53:32] 2026-01-29 12:52:53,965 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:54,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 13:53:32] 2026-01-29 12:52:54,153 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:54,462 | INFO     | [data] copytool_in thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:54,467 | INFO     | [payload] validate_post thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:54,620 | INFO     | [job] control thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:54,702 | INFO     | [data] control thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:54,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 13:53:32] 2026-01-29 12:52:54,867 | INFO     | [job] queue monitor thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:54,934 | INFO     | [payload] control thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:54,976 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:55,075 | INFO     | [job] validate thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:56,114 | INFO     | [data] copytool_out thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:52:58,720 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 13:53:32] 2026-01-29 12:53:21,395 | INFO     | [monitor] cgroup control has ended
[2026-01-29 13:53:32] 2026-01-29 12:53:21,499 | INFO     | PID=1030 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-29 13:53:32] 2026-01-29 12:53:21,500 | INFO     | .. there are 2 such processes running
[2026-01-29 13:53:32] 2026-01-29 12:53:21,501 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 13:53:32] 2026-01-29 12:53:21,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 13:53:32] 2026-01-29 12:53:21,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 13:53:32] 2026-01-29 12:53:22,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325890987840)>', '<ExcThread(monitor, started 140325213423360)>']
[2026-01-29 13:53:32] 2026-01-29 12:53:22,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 13:53:32] 2026-01-29 12:53:22,506 | INFO     | [monitor] control thread has ended
[2026-01-29 13:53:32] 2026-01-29 12:53:27,428 | INFO     | all workflow threads have been joined
[2026-01-29 13:53:32] 2026-01-29 12:53:27,428 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 13:53:32] 2026-01-29 12:53:27,428 | INFO     | traces error code: 0
[2026-01-29 13:53:32] 2026-01-29 12:53:27,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 13:53:32] 2026-01-29 12:53:27,891 [wrapper] ==== pilot stdout END ====
[2026-01-29 13:53:32] 2026-01-29 12:53:27,982 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 13:53:32] 2026-01-29 12:53:28,068 [wrapper] pilotpid: 1030
[2026-01-29 13:53:32] 2026-01-29 12:53:28,163 [wrapper] Pilot exit status: 0
[2026-01-29 13:53:32] 2026-01-29 12:53:28,579 [wrapper] pandaids: 6987876724
[2026-01-29 13:53:32] 2026-01-29 12:53:29,480 [wrapper] cleanup supervisor_pilot 12572 1031
[2026-01-29 13:53:32] 2026-01-29 12:53:29,579 [wrapper] Test setup, not cleaning
[2026-01-29 13:53:32] 2026-01-29 12:53:29,691 [wrapper] apfmon messages muted
[2026-01-29 13:53:32] 2026-01-29 12:53:29,803 [wrapper] ==== wrapper stdout END ====
[2026-01-29 13:53:32] 2026-01-29 12:53:29,858 [wrapper] ==== wrapper stderr END ====
[2026-01-29 13:53:32]  *** Error codes and diagnostics ***
[2026-01-29 13:53:32]     "exeErrorCode": 0,
[2026-01-29 13:53:32]     "exeErrorDiag": "",
[2026-01-29 13:53:32]     "pilotErrorCode": 0,
[2026-01-29 13:53:32]     "pilotErrorDiag": "",
[2026-01-29 13:53:32]  *** Listing of results directory ***
[2026-01-29 13:53:32] total 676604
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc    584422 Jan 28 21:38 pilot3.tar.gz
[2026-01-29 13:53:32] -rwx------. 1 boinc boinc     36322 Jan 28 21:42 runpilot2-wrapper.sh
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc      5111 Jan 28 21:42 queuedata.json
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc       100 Jan 29 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 13:53:32] -rwxr-xr-x. 1 boinc boinc      7986 Jan 29 09:29 run_atlas
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc       105 Jan 29 09:29 job.xml
[2026-01-29 13:53:32] -rw-r--r--. 2 boinc boinc 501206678 Jan 29 09:29 EVNT.48317949._000052.pool.root.1
[2026-01-29 13:53:32] drwxrwx--x. 2 boinc boinc        68 Jan 29 09:29 shared
[2026-01-29 13:53:32] -rw-r--r--. 2 boinc boinc    597766 Jan 29 09:29 input.tar.gz
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc      6392 Jan 29 09:29 init_data.xml
[2026-01-29 13:53:32] -rw-r--r--. 2 boinc boinc     15845 Jan 29 09:29 start_atlas.sh
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc         0 Jan 29 09:29 boinc_lockfile
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc      2522 Jan 29 09:29 pandaJob.out
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc       413 Jan 29 09:35 workernode_map.json
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc   1005755 Jan 29 09:35 agis_schedconf.cvmfs.json
[2026-01-29 13:53:32] drwx------. 5 boinc boinc      4096 Jan 29 09:35 pilot3
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc 182359480 Jan 29 13:51 HITS.48317952._002622.pool.root.1
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc       532 Jan 29 13:51 boinc_task_state.xml
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc      1010 Jan 29 13:52 memory_monitor_summary.json
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc   1516246 Jan 29 13:52 agis_ddmendpoints.agis.ALL.json
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc    511490 Jan 29 13:52 log.48317952._002622.job.log.tgz.1
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc      6312 Jan 29 13:52 heartbeat.json
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc      8192 Jan 29 13:53 boinc_mmap_file
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc        28 Jan 29 13:53 wrapper_checkpoint.txt
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc        95 Jan 29 13:53 pilot_heartbeat.json
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc      4880 Jan 29 13:53 pilotlog.txt
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc   2165952 Jan 29 13:53 log.48317952._002622.job.log.1
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc       357 Jan 29 13:53 output.list
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc       620 Jan 29 13:53 runtime_log
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc   2693120 Jan 29 13:53 result.tar.gz
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc      8832 Jan 29 13:53 runtime_log.err
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc       656 Jan 29 13:53 RfLNDmgXR58n9Rq4apOajLDm4fhM0noT9bVooX4SDmE5GKDmUqk9vn.diag
[2026-01-29 13:53:32] -rw-r--r--. 1 boinc boinc     20662 Jan 29 13:53 stderr.txt
[2026-01-29 13:53:32] HITS file was successfully produced:
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc 182359480 Jan 29 13:51 shared/HITS.pool.root.1
[2026-01-29 13:53:32]  *** Contents of shared directory: ***
[2026-01-29 13:53:32] total 670780
[2026-01-29 13:53:32] -rw-r--r--. 2 boinc boinc 501206678 Jan 29 09:29 ATLAS.root_0
[2026-01-29 13:53:32] -rw-r--r--. 2 boinc boinc    597766 Jan 29 09:29 input.tar.gz
[2026-01-29 13:53:32] -rw-r--r--. 2 boinc boinc     15845 Jan 29 09:29 start_atlas.sh
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc 182359480 Jan 29 13:51 HITS.pool.root.1
[2026-01-29 13:53:32] -rw-------. 1 boinc boinc   2693120 Jan 29 13:53 result.tar.gz
13:53:34 (29363): run_atlas exited; CPU time 55999.082556
13:53:34 (29363): called boinc_finish(0)

</stderr_txt>
]]>

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