Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:40:07 (1849653): wrapper (7.7.26015): starting
17:40:07 (1849653): wrapper: running run_atlas (--nthreads 4)
[2026-01-29 17:40:07] Arguments: --nthreads 4
[2026-01-29 17:40:07] Threads: 4
[2026-01-29 17:40:07] Checking for CVMFS
[2026-01-29 17:40:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 17:40:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 17:40:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 17:40:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 17:40:08] 2.9.2.0 1536777 1581 95120 155647 0 50 22632255 36864001 0 130560 0 898650 99.993 34315 10503 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-29 17:40:08] CVMFS is ok
[2026-01-29 17:40:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 17:40:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 17:40:08] Further information can be found at the LHC@home message board.
[2026-01-29 17:40:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 17:40:08] Checking for apptainer binary...
[2026-01-29 17:40:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 17:40:08] Running /usr/bin/apptainer --version
[2026-01-29 17:40:08] apptainer version 1.4.1-1.1
[2026-01-29 17:40:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 17:40:08] magicA244a
[2026-01-29 17:40:08] apptainer works
[2026-01-29 17:40:08] Set ATHENA_PROC_NUMBER=4
[2026-01-29 17:40:08] Set ATHENA_CORE_NUMBER=4
[2026-01-29 17:40:08] Starting ATLAS job with PandaID=6990488562
[2026-01-29 17:40:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 18:43:49]  *** The last 200 lines of the pilot log: ***
[2026-01-29 18:43:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 18:43:49] 
[2026-01-29 18:43:49] 2026-01-29 17:43:18,692 | INFO     | **************************************
[2026-01-29 18:43:49] 2026-01-29 17:43:18,851 | WARNING  | process 1858277 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 18:43:49] 2026-01-29 17:43:18,880 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 18:43:49] 2026-01-29 17:43:18,880 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 18:43:49] 2026-01-29 17:43:18,881 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-29 18:43:49] 2026-01-29 17:43:18,881 | WARNING  | maxPSS not found in memory monitor output
[2026-01-29 18:43:49] 2026-01-29 17:43:18,881 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6990488562/payload.stdout) since it has not been created yet
[2026-01-29 18:43:49] 2026-01-29 17:43:18,881 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-29 18:43:49] 2026-01-29 17:43:18,892 | INFO     | sufficient remaining disk space (333052903424 B)
[2026-01-29 18:43:49] 2026-01-29 17:43:18,892 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-29 18:43:49] 2026-01-29 17:43:18,892 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6990488562/HITS.48317872._008438.pool.root.1 since it does not exist
[2026-01-29 18:43:49] 2026-01-29 17:43:18,932 | INFO     | number of running child processes to parent process 1858277: 1
[2026-01-29 18:43:49] 2026-01-29 17:43:18,932 | INFO     | maximum number of monitored processes: 6
[2026-01-29 18:43:49] 2026-01-29 17:43:18,932 | INFO     | aborting job monitoring since job object (job id=6990488562) has expired
[2026-01-29 18:43:49] 2026-01-29 17:43:19,195 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-29 18:43:49] 2026-01-29 17:43:19,209 | INFO     | sufficient remaining disk space (333052903424 B)
[2026-01-29 18:43:49] 2026-01-29 17:43:19,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 18:43:49] 2026-01-29 17:43:19,210 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 18:43:49] 2026-01-29 17:43:19,210 | INFO     | update_server=False
[2026-01-29 18:43:49] 2026-01-29 17:43:19,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 18:43:49] 2026-01-29 17:43:19,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 18:43:49] 2026-01-29 17:43:19,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 18:43:49] 2026-01-29 17:43:19,210 | INFO     | will abort loop
[2026-01-29 18:43:49] 2026-01-29 17:43:19,243 | INFO     | all payload control threads have been joined
[2026-01-29 18:43:49] 2026-01-29 17:43:19,745 | INFO     | all data control threads have been joined
[2026-01-29 18:43:49] 2026-01-29 17:43:20,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 18:43:49] 2026-01-29 17:43:20,216 | INFO     | [job] retrieve thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:20,216 | INFO     | [job] queue monitor thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:20,216 | INFO     | [job] job monitor thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:20,249 | INFO     | [payload] control thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:20,324 | INFO     | [data] copytool_in thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:20,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 18:43:49] 2026-01-29 17:43:20,676 | INFO     | all job control threads have been joined
[2026-01-29 18:43:49] 2026-01-29 17:43:20,702 | INFO     | [payload] failed_post thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:20,751 | INFO     | [data] control thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:21,274 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:21,596 | INFO     | [job] validate thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:21,672 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:21,675 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:21,681 | INFO     | [job] control thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:21,702 | INFO     | [payload] validate_post thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:22,101 | INFO     | [data] copytool_out thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:22,643 | INFO     | [monitor] cgroup control has ended
[2026-01-29 18:43:49] 2026-01-29 17:43:24,625 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:29,489 | INFO     | job.realtimelogging is not enabled
[2026-01-29 18:43:49] 2026-01-29 17:43:30,494 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 18:43:49] 2026-01-29 17:43:30,943 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679724427072)>', '<ExcThread(monitor, started 140679078463232)>']
[2026-01-29 18:43:49] 2026-01-29 17:43:35,949 | INFO     | all workflow threads have been joined
[2026-01-29 18:43:49] 2026-01-29 17:43:35,950 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 18:43:49] 2026-01-29 17:43:35,950 | INFO     | traces error code: 0
[2026-01-29 18:43:49] 2026-01-29 17:43:35,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 18:43:49] 2026-01-29 17:43:49,570 | INFO     | PID=1853768 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-29 18:43:49] 2026-01-29 17:43:49,570 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 18:43:49] 2026-01-29 17:43:49,570 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 18:43:49] 2026-01-29 17:43:49,570 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 18:43:49] 2026-01-29 17:43:49,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 18:43:49] 2026-01-29 17:43:49,570 | INFO     | [monitor] control thread has ended
[2026-01-29 18:43:49] 2026-01-29 17:43:49,624 [wrapper] ==== pilot stdout END ====
[2026-01-29 18:43:49] 2026-01-29 17:43:49,626 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 18:43:49] 2026-01-29 17:43:49,629 [wrapper] pilotpid: 1853768
[2026-01-29 18:43:49] 2026-01-29 17:43:49,631 [wrapper] Pilot exit status: 0
[2026-01-29 18:43:49] 2026-01-29 17:43:49,639 [wrapper] pandaids: 6990488562
[2026-01-29 18:43:49] 2026-01-29 17:43:49,657 [wrapper] cleanup supervisor_pilot 1863466 1853769
[2026-01-29 18:43:49] 2026-01-29 17:43:49,659 [wrapper] Test setup, not cleaning
[2026-01-29 18:43:49] 2026-01-29 17:43:49,662 [wrapper] apfmon messages muted
[2026-01-29 18:43:49] 2026-01-29 17:43:49,665 [wrapper] ==== wrapper stdout END ====
[2026-01-29 18:43:49] 2026-01-29 17:43:49,667 [wrapper] ==== wrapper stderr END ====
[2026-01-29 18:43:49]  *** Error codes and diagnostics ***
[2026-01-29 18:43:49]     "exeErrorCode": 0,
[2026-01-29 18:43:49]     "exeErrorDiag": "",
[2026-01-29 18:43:49]     "pilotErrorCode": 0,
[2026-01-29 18:43:49]     "pilotErrorDiag": "",
[2026-01-29 18:43:49]  *** Listing of results directory ***
[2026-01-29 18:43:49] total 679640
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc    584422 Jan 29 02:04 pilot3.tar.gz
[2026-01-29 18:43:49] -rwx------ 1 boinc boinc     36322 Jan 29 02:06 runpilot2-wrapper.sh
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc      5111 Jan 29 02:09 queuedata.json
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc       100 Jan 29 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 18:43:49] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 17:40 run_atlas
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc       105 Jan 29 17:40 job.xml
[2026-01-29 18:43:49] -rw-r--r-- 2 boinc boinc 503662682 Jan 29 17:40 EVNT.48317869._000079.pool.root.1
[2026-01-29 18:43:49] -rw-r--r-- 2 boinc boinc    597764 Jan 29 17:40 input.tar.gz
[2026-01-29 18:43:49] -rw-r--r-- 2 boinc boinc     15845 Jan 29 17:40 start_atlas.sh
[2026-01-29 18:43:49] drwxrwx--x 2 boinc boinc      4096 Jan 29 17:40 shared
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc         0 Jan 29 17:40 boinc_setup_complete
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc      6438 Jan 29 17:40 init_data.xml
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc         0 Jan 29 17:40 boinc_lockfile
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc      2516 Jan 29 17:40 pandaJob.out
[2026-01-29 18:43:49] -rw------- 1 boinc boinc   1009660 Jan 29 17:40 agis_schedconf.cvmfs.json
[2026-01-29 18:43:49] -rw------- 1 boinc boinc   1511668 Jan 29 17:40 agis_ddmendpoints.agis.ALL.json
[2026-01-29 18:43:49] -rw------- 1 boinc boinc       427 Jan 29 17:40 workernode_map.json
[2026-01-29 18:43:49] drwx------ 5 boinc boinc      4096 Jan 29 17:40 pilot3
[2026-01-29 18:43:49] -rw------- 1 boinc boinc 186735785 Jan 29 18:42 HITS.48317872._008438.pool.root.1
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc       530 Jan 29 18:43 boinc_task_state.xml
[2026-01-29 18:43:49] -rw------- 1 boinc boinc      1031 Jan 29 18:43 memory_monitor_summary.json
[2026-01-29 18:43:49] -rw------- 1 boinc boinc    246915 Jan 29 18:43 log.48317872._008438.job.log.tgz.1
[2026-01-29 18:43:49] -rw------- 1 boinc boinc      6313 Jan 29 18:43 heartbeat.json
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc        27 Jan 29 18:43 wrapper_checkpoint.txt
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc      8192 Jan 29 18:43 boinc_mmap_file
[2026-01-29 18:43:49] -rw------- 1 boinc boinc       747 Jan 29 18:43 pilotlog.txt
[2026-01-29 18:43:49] -rw------- 1 boinc boinc        95 Jan 29 18:43 pilot_heartbeat.json
[2026-01-29 18:43:49] -rw------- 1 boinc boinc    567402 Jan 29 18:43 log.48317872._008438.job.log.1
[2026-01-29 18:43:49] -rw------- 1 boinc boinc       357 Jan 29 18:43 output.list
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc       620 Jan 29 18:43 runtime_log
[2026-01-29 18:43:49] -rw------- 1 boinc boinc    829440 Jan 29 18:43 result.tar.gz
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc      8916 Jan 29 18:43 runtime_log.err
[2026-01-29 18:43:49] -rw------- 1 boinc boinc       661 Jan 29 18:43 0u9MDmYfV58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmFbHKDmNlNOUn.diag
[2026-01-29 18:43:49] -rw-r--r-- 1 boinc boinc      9925 Jan 29 18:43 stderr.txt
[2026-01-29 18:43:49] HITS file was successfully produced:
[2026-01-29 18:43:49] -rw------- 1 boinc boinc 186735785 Jan 29 18:42 shared/HITS.pool.root.1
[2026-01-29 18:43:49]  *** Contents of shared directory: ***
[2026-01-29 18:43:49] total 675640
[2026-01-29 18:43:49] -rw-r--r-- 2 boinc boinc 503662682 Jan 29 17:40 ATLAS.root_0
[2026-01-29 18:43:49] -rw-r--r-- 2 boinc boinc    597764 Jan 29 17:40 input.tar.gz
[2026-01-29 18:43:49] -rw-r--r-- 2 boinc boinc     15845 Jan 29 17:40 start_atlas.sh
[2026-01-29 18:43:49] -rw------- 1 boinc boinc 186735785 Jan 29 18:42 HITS.pool.root.1
[2026-01-29 18:43:49] -rw------- 1 boinc boinc    829440 Jan 29 18:43 result.tar.gz
18:44:12 (1849653): run_atlas exited; CPU time 14185.210369
18:44:12 (1849653): called boinc_finish(0)

</stderr_txt>
]]>

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