Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-03 23:59:15 (12336): vboxwrapper version 26210
2026-02-03 23:59:15 (12336): BOINC client version: 8.2.8
2026-02-03 23:59:16 (12336): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-02-03 23:59:16 (12336): Successfully copied 'init_data.xml' to the shared directory.
2026-02-03 23:59:17 (12336): Create VM. (boinc_b9669c8e66299a9f, slot#1)
2026-02-03 23:59:17 (12336): Setting Memory Size for VM. (4400MB)
2026-02-03 23:59:17 (12336): Setting CPU Count for VM. (4)
2026-02-03 23:59:18 (12336): Setting Chipset Options for VM.
2026-02-03 23:59:18 (12336): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-03 23:59:18 (12336): Setting Boot Options for VM.
2026-02-03 23:59:19 (12336): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-03 23:59:19 (12336): Enabling VM Network Access.
2026-02-03 23:59:19 (12336): Disabling USB Support for VM.
2026-02-03 23:59:19 (12336): Disabling COM Port Support for VM.
2026-02-03 23:59:20 (12336): Disabling LPT Port Support for VM.
2026-02-03 23:59:20 (12336): Disabling Audio Support for VM.
2026-02-03 23:59:20 (12336): Disabling Clipboard Support for VM.
2026-02-03 23:59:20 (12336): Disabling Drag and Drop Support for VM.
2026-02-03 23:59:21 (12336): Adding storage controller(s) to VM.
2026-02-03 23:59:21 (12336): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-03 23:59:22 (12336): Adding VirtualBox Guest Additions to VM.
2026-02-03 23:59:22 (12336): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-03 23:59:23 (12336): forwarding host port 50108 to guest port 80
2026-02-03 23:59:23 (12336): Enabling remote desktop for VM.
2026-02-03 23:59:23 (12336): Required extension pack not installed, remote desktop not enabled.
2026-02-03 23:59:23 (12336): Enabling shared directory for VM.
2026-02-03 23:59:24 (12336): Starting VM using VBoxManage interface. (boinc_b9669c8e66299a9f, slot#1)
2026-02-03 23:59:29 (12336): Successfully started VM. (PID = '14092')
2026-02-03 23:59:29 (12336): Reporting VM Process ID to BOINC.
2026-02-03 23:59:29 (12336): Guest Log: BIOS: VirtualBox 6.1.34
2026-02-03 23:59:29 (12336): Guest Log: CPUID EDX: 0x178bfbff
2026-02-03 23:59:29 (12336): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-03 23:59:29 (12336): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-03 23:59:29 (12336): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-03 23:59:29 (12336): Detected: Web Application Enabled (http://localhost:50108)
2026-02-03 23:59:29 (12336): Preference change detected
2026-02-03 23:59:29 (12336): Setting CPU throttle for VM. (100%)
2026-02-03 23:59:29 (12336): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-03 23:59:31 (12336): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-03 23:59:31 (12336): Guest Log: BIOS: Booting from Hard Disk...
2026-02-03 23:59:34 (12336): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-03 23:59:34 (12336): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-03 23:59:34 (12336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-03 23:59:41 (12336): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-03 23:59:41 (12336): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-03 23:59:51 (12336): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-03 23:59:51 (12336): Guest Log: 00:00:00.000282 main     Log opened 2026-02-03T23:59:49.577760000Z
2026-02-03 23:59:51 (12336): Guest Log: 00:00:00.000431 main     OS Product: Linux
2026-02-03 23:59:51 (12336): Guest Log: 00:00:00.000482 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-03 23:59:51 (12336): Guest Log: 00:00:00.000528 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-03 23:59:51 (12336): Guest Log: 00:00:00.000574 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-03 23:59:51 (12336): Guest Log: 00:00:00.000576 main     Process ID: 1307
2026-02-03 23:59:51 (12336): Guest Log: 00:00:00.000577 main     Package type: LINUX_64BITS_GENERIC
2026-02-03 23:59:51 (12336): Guest Log: 00:00:00.002742 main     5.2.32 r132073 started. Verbose level = 0
2026-02-03 23:59:51 (12336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-03 23:59:51 (12336): Guest Log: [INFO] Mounting shared directory
2026-02-03 23:59:51 (12336): Guest Log: [INFO] Checking for init_data.xml
2026-02-03 23:59:58 (12336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-03 23:59:58 (12336): Guest Log: [INFO] Detected branch: prod
2026-02-03 23:59:58 (12336): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-03 23:59:58 (12336): Guest Log: Copying input files
2026-02-04 00:00:01 (12336): Guest Log: 00:00:10.005470 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 214 835 000ns (GuestNow=1 770 159 601 367 526 000 ns GuestLast=1 770 163 189 582 361 000 ns fSetTimeLastLoop=true )
2026-02-04 00:00:03 (12336): Guest Log: Copied input files into RunAtlas.
2026-02-04 00:00:03 (12336): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-04 00:00:03 (12336): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-04 00:00:03 (12336): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-04 00:00:03 (12336): Guest Log: Further information can be found at the LHC@home message board.
2026-02-04 00:00:13 (12336): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-04 00:00:13 (12336): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-04 00:00:13 (12336): Guest Log: 2.6.3.0 1584 0 30160 155846 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-04 00:00:15 (12336): Guest Log: copied the webapp to /var/www
2026-02-04 00:00:15 (12336): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-04 00:00:15 (12336): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-04 00:00:15 (12336): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-04 00:00:15 (12336): Guest Log:  *** Starting ATLAS job. (PandaID=6990488610 taskID=48317872) ***
2026-02-04 01:42:53 (12336): Status Report: Elapsed Time: '6000.544258'
2026-02-04 01:42:54 (12336): Status Report: CPU Time: '22418.984375'
2026-02-04 03:26:36 (12336): Status Report: Elapsed Time: '12000.618715'
2026-02-04 03:26:36 (12336): Status Report: CPU Time: '47143.953125'
2026-02-04 05:13:01 (12336): Status Report: Elapsed Time: '18000.793631'
2026-02-04 05:13:01 (12336): Status Report: CPU Time: '72434.687500'
2026-02-04 06:31:44 (12336): Guest Log:  *** Job finished ***
2026-02-04 06:31:44 (12336): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:34,340 | INFO     | all workflow threads have been joined
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:34,340 | INFO     | end of generic workflow (traces error code: 0)
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:34,340 | INFO     | traces error code: 0
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:34,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,023 | INFO     | PID=5982 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,024 | INFO     | found 0 job(s) in 20 queues
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,025 | INFO     | [monitor] control thread has ended
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,172 [wrapper] ==== pilot stdout END ====
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,180 [wrapper] ==== wrapper stdout RESUME ====
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,186 [wrapper] pilotpid: 5982
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,194 [wrapper] Pilot exit status: 0
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,239 [wrapper] pandaids: 6990488610
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,293 [wrapper] cleanup supervisor_pilot 31127 5983
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,306 [wrapper] Test setup, not cleaning
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,315 [wrapper] apfmon messages muted
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,323 [wrapper] ==== wrapper stdout END ====
2026-02-04 06:31:44 (12336): Guest Log: 2026-02-04 05:31:43,331 [wrapper] ==== wrapper stderr END ====
2026-02-04 06:31:44 (12336): Guest Log:  *** Error codes and diagnostics ***
2026-02-04 06:31:44 (12336): Guest Log:     "exeErrorCode": 0,
2026-02-04 06:31:44 (12336): Guest Log:     "exeErrorDiag": "",
2026-02-04 06:31:44 (12336): Guest Log:     "pilotErrorCode": 0,
2026-02-04 06:31:44 (12336): Guest Log:     "pilotErrorDiag": "",
2026-02-04 06:31:44 (12336): Guest Log:  *** Listing of results directory ***
2026-02-04 06:31:44 (12336): Guest Log: total 191156
2026-02-04 06:31:44 (12336): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 29 01:04 queuedata.json
2026-02-04 06:31:44 (12336): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 29 01:04 pilot3.tar.gz
2026-02-04 06:31:44 (12336): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 29 01:04 runpilot2-wrapper.sh
2026-02-04 06:31:44 (12336): Guest Log: -rwxr-xr-x. 1 atlas atlas      8808 Feb  3 23:00 init_data.xml
2026-02-04 06:31:44 (12336): Guest Log: -rwxr-xr-x. 1 atlas atlas    597766 Feb  3 23:00 input.tar.gz
2026-02-04 06:31:44 (12336): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  3 23:00 start_atlas.sh
2026-02-04 06:31:44 (12336): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  3 23:00 EVNT.48317869._000080.pool.root.1 -> /data/./ATLAS.root_0
2026-02-04 06:31:44 (12336): Guest Log: -rw-r--r--. 1 atlas atlas      2516 Feb  3 23:00 pandaJob.out
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas   1009244 Feb  3 23:00 agis_schedconf.cvmfs.json
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas       426 Feb  3 23:01 workernode_map.json
2026-02-04 06:31:44 (12336): Guest Log: drwx------. 5 atlas atlas      4096 Feb  3 23:01 pilot3
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas 184413777 Feb  4 05:30 HITS.48317872._008486.pool.root.1
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas      1028 Feb  4 05:31 memory_monitor_summary.json
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  4 05:31 agis_ddmendpoints.agis.ALL.json
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas    518277 Feb  4 05:31 log.48317872._008486.job.log.tgz.1
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas      6355 Feb  4 05:31 heartbeat.json
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas        95 Feb  4 05:31 pilot_heartbeat.json
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas       744 Feb  4 05:31 pilotlog.txt
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas   3216128 Feb  4 05:31 log.48317872._008486.job.log.1
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas       357 Feb  4 05:31 output.list
2026-02-04 06:31:44 (12336): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  4 05:31 runtime_log
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas   3747840 Feb  4 05:31 result.tar.gz
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas       664 Feb  4 05:31 TMwMDmcdV58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbTHKDmQGjSAo.diag
2026-02-04 06:31:44 (12336): Guest Log: -rw-r--r--. 1 atlas atlas      8770 Feb  4 05:31 runtime_log.err
2026-02-04 06:31:44 (12336): Guest Log: Looking for outputfile HITS.48317872._008486.pool.root.1
2026-02-04 06:31:44 (12336): Guest Log: HITS file was successfully produced
2026-02-04 06:31:44 (12336): Guest Log: -rw-------. 1 atlas atlas 184413777 Feb  4 05:30 /home/atlas/RunAtlas/HITS.48317872._008486.pool.root.1
2026-02-04 06:31:46 (12336): Guest Log: Successfully finished the ATLAS job!
2026-02-04 06:31:46 (12336): Guest Log: Copying the results back to the shared directory!
2026-02-04 06:31:46 (12336): Guest Log:  *** Contents of shared directory: ***
2026-02-04 06:31:46 (12336): Guest Log: total 669696
2026-02-04 06:31:46 (12336): Guest Log: -rwxrwxrwx. 1 root root 496979216 Feb  3 22:59 ATLAS.root_0
2026-02-04 06:31:46 (12336): Guest Log: -rwxrwxrwx. 1 root root 184413777 Feb  4 05:31 HITS.pool.root.1
2026-02-04 06:31:46 (12336): Guest Log: -rwxrwxrwx. 1 root root      8808 Feb  3 22:59 init_data.xml
2026-02-04 06:31:46 (12336): Guest Log: -rwxrwxrwx. 1 root root    597766 Jan 29 03:55 input.tar.gz
2026-02-04 06:31:46 (12336): Guest Log: -rwxrwxrwx. 1 root root   3747840 Feb  4 05:31 result.tar.gz
2026-02-04 06:31:46 (12336): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 29 03:55 start_atlas.sh
2026-02-04 06:31:46 (12336): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-04 06:31:46 (12336): VM Completion File Detected.
2026-02-04 06:31:46 (12336): Powering off VM.
2026-02-04 06:31:48 (12336): Successfully stopped VM.
2026-02-04 06:31:48 (12336): Deregistering VM. (boinc_b9669c8e66299a9f, slot#1)
2026-02-04 06:31:48 (12336): Removing network bandwidth throttle group from VM.
2026-02-04 06:31:48 (12336): Removing VM from VirtualBox.
2026-02-04 06:31:53 (12336): called boinc_finish(0)

</stderr_txt>
]]>

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