Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:49:40 (28309): wrapper (7.7.26015): starting
19:49:40 (28309): wrapper: running run_atlas (--nthreads 12)
[2026-01-28 19:49:40] Arguments: --nthreads 12
[2026-01-28 19:49:40] Threads: 12
[2026-01-28 19:49:40] Checking for CVMFS
[2026-01-28 19:49:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 19:49:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 19:49:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 19:49:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 19:49:41] 2.11.2.0 2914 379143 94668 155626 1 188 16464892 20275201 1 130560 1 161757583 99.949 22887954 16565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-28 19:49:41] CVMFS is ok
[2026-01-28 19:49:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 19:49:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 19:49:41] Further information can be found at the LHC@home message board.
[2026-01-28 19:49:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 19:49:41] Checking for apptainer binary...
[2026-01-28 19:49:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 19:49:41] Running /usr/bin/apptainer --version
[2026-01-28 19:49:41] apptainer version 1.3.2-1.el7
[2026-01-28 19:49:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 19:49:43] c-205-5.aglt2.org
[2026-01-28 19:49:43] apptainer works
[2026-01-28 19:49:43] Set ATHENA_PROC_NUMBER=12
[2026-01-28 19:49:43] Set ATHENA_CORE_NUMBER=12
[2026-01-28 19:49:43] Starting ATLAS job with PandaID=6987880910
[2026-01-28 19:49:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 21:08:16]  *** The last 200 lines of the pilot log: ***
[2026-01-28 21:08:16]  guid=d531b3ed-5beb-47a4-ac3d-0199e3f4eb7b
[2026-01-28 21:08:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-28 21:08:16]  is_altstaged=None
[2026-01-28 21:08:16]  is_tar=False
[2026-01-28 21:08:16]  lfn=log.48317952._002815.job.log.tgz.1
[2026-01-28 21:08:16]  mtime=0
[2026-01-28 21:08:16]  protocol_id=None
[2026-01-28 21:08:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-28 21:08:16]  replicas=None
[2026-01-28 21:08:16]  scope=mc23_13p6TeV
[2026-01-28 21:08:16]  status=None
[2026-01-28 21:08:16]  status_code=0
[2026-01-28 21:08:16]  storage_token=
[2026-01-28 21:08:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6987880910/log.48317952._002815.job.log.tgz.1
[2026-01-28 21:08:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/e6/log.48317952._002815.job.log.tgz.1
[2026-01-28 21:08:16]  workdir=None
[2026-01-28 21:08:16] ]
[2026-01-28 21:08:16] 2026-01-29 02:07:18,862 | INFO     | transferring file log.48317952._002815.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6987880910/log.48317952._002815.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-28 21:08:16] 2026-01-29 02:07:18,863 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6987880910/log.48317952._002815.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317952._002815.job
[2026-01-28 21:08:16] 2026-01-29 02:07:18,883 | INFO     | adding to output.list: log.48317952._002815.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/e6/log.48317952._002815.job.log.tg
[2026-01-28 21:08:16] 2026-01-29 02:07:18,884 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-28 21:08:16] 2026-01-29 02:07:18,885 | INFO     | summary of transferred files:
[2026-01-28 21:08:16] 2026-01-29 02:07:18,885 | INFO     |  -- lfn=log.48317952._002815.job.log.tgz.1, status_code=0, status=transferred
[2026-01-28 21:08:16] 2026-01-29 02:07:18,885 | INFO     | stage-out finished correctly
[2026-01-28 21:08:16] 2026-01-29 02:07:19,600 | INFO     | monitor loop #353: job 0:6987880910 is in state 'finished'
[2026-01-28 21:08:16] 2026-01-29 02:07:19,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-28 21:08:16] 2026-01-29 02:07:19,680 | INFO     | time since job start (4635s) is within the limit (349056.0s)
[2026-01-28 21:08:16] 2026-01-29 02:07:21,685 | INFO     | time since job start (4637s) is within the limit (349056.0s)
[2026-01-28 21:08:16] 2026-01-29 02:07:22,104 | INFO     | monitor loop #354: job 0:6987880910 is in state 'finished'
[2026-01-28 21:08:16] 2026-01-29 02:07:22,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-28 21:08:16] 2026-01-29 02:07:22,342 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-28 21:08:16] 2026-01-29 02:07:22,805 | INFO     | PID=32277 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-28 21:08:16] 2026-01-29 02:07:23,066 | INFO     | job 6987880910 has state=finished
[2026-01-28 21:08:16] 2026-01-29 02:07:23,066 | INFO     | preparing for final server update for job 6987880910 in state='finished'
[2026-01-28 21:08:16] 2026-01-29 02:07:23,066 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6987880910/jobReport.json
[2026-01-28 21:08:16] 2026-01-29 02:07:23,070 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-28 21:08:16] 2026-01-29 02:07:23,070 | INFO     | this job has now completed (state=finished)
[2026-01-28 21:08:16] 2026-01-29 02:07:23,071 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 21:08:16] 2026-01-29 02:07:23,071 | INFO     | log transfer has been attempted: DONE
[2026-01-28 21:08:16] 2026-01-29 02:07:23,071 | INFO     | job 6987880910 has finished - writing final server update
[2026-01-28 21:08:16] 2026-01-29 02:07:23,071 | INFO     | total number of processed events: 400 (read)
[2026-01-28 21:08:16] 2026-01-29 02:07:23,074 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6987880910/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 21:08:16] 2026-01-29 02:07:23,074 | INFO     | extracted standard info from prmon json
[2026-01-28 21:08:16] 2026-01-29 02:07:23,075 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 21:08:16] 2026-01-29 02:07:23,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 21:08:16] 2026-01-29 02:07:23,075 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 21:08:16] 2026-01-29 02:07:23,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 21:08:16] 2026-01-29 02:07:23,077 | INFO     | fitting pss+swap vs Time
[2026-01-28 21:08:16] 2026-01-29 02:07:23,077 | INFO     | sum of square deviations: 101843770.0
[2026-01-28 21:08:16] 2026-01-29 02:07:23,078 | INFO     | sum of deviations: 2545145455.9999995
[2026-01-28 21:08:16] 2026-01-29 02:07:23,078 | INFO     | mean x: 1769650207.0
[2026-01-28 21:08:16] 2026-01-29 02:07:23,078 | INFO     | mean y: 2967030.9420289854
[2026-01-28 21:08:16] 2026-01-29 02:07:23,078 | INFO     | intersect: -44221801779.71284
[2026-01-28 21:08:16] 2026-01-29 02:07:23,078 | INFO     | chi2: 0.03208573060259593
[2026-01-28 21:08:16] 2026-01-29 02:07:23,078 | INFO     | current memory leak: 24.99 B/s (using 69 data points, chi2=0.03)
[2026-01-28 21:08:16] 2026-01-29 02:07:23,079 | INFO     | could have reported an average CPU frequency of 1795 MHz (6 samples)
[2026-01-28 21:08:16] 2026-01-29 02:07:23,079 | INFO     | ..............................
[2026-01-28 21:08:16] 2026-01-29 02:07:23,079 | INFO     | . Timing measurements:
[2026-01-28 21:08:16] 2026-01-29 02:07:23,079 | INFO     | . get job = 0 s
[2026-01-28 21:08:16] 2026-01-29 02:07:23,079 | INFO     | . initial setup = 7 s
[2026-01-28 21:08:16] 2026-01-29 02:07:23,079 | INFO     | . payload setup = 7 s
[2026-01-28 21:08:16] 2026-01-29 02:07:23,079 | INFO     | . stage-in = 0 s
[2026-01-28 21:08:16] 2026-01-29 02:07:23,079 | INFO     | . payload execution = 4611 s
[2026-01-28 21:08:16] 2026-01-29 02:07:23,080 | INFO     | . stage-out = 0 s
[2026-01-28 21:08:16] 2026-01-29 02:07:23,080 | INFO     | . log creation = 0 s
[2026-01-28 21:08:16] 2026-01-29 02:07:23,080 | INFO     | ..............................
[2026-01-28 21:08:16] 2026-01-29 02:07:23,157 | INFO     | 
[2026-01-28 21:08:16] 2026-01-29 02:07:23,157 | INFO     | job summary report
[2026-01-28 21:08:16] 2026-01-29 02:07:23,157 | INFO     | --------------------------------------------------
[2026-01-28 21:08:16] 2026-01-29 02:07:23,157 | INFO     | PanDA job id: 6987880910
[2026-01-28 21:08:16] 2026-01-29 02:07:23,157 | INFO     | task id: 48317952
[2026-01-28 21:08:16] 2026-01-29 02:07:23,157 | INFO     | errors: (none)
[2026-01-28 21:08:16] 2026-01-29 02:07:23,158 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 21:08:16] 2026-01-29 02:07:23,158 | INFO     | pilot state: finished 
[2026-01-28 21:08:16] 2026-01-29 02:07:23,158 | INFO     | transexitcode: 0
[2026-01-28 21:08:16] 2026-01-29 02:07:23,158 | INFO     | exeerrorcode: 0
[2026-01-28 21:08:16] 2026-01-29 02:07:23,158 | INFO     | exeerrordiag: 
[2026-01-28 21:08:16] 2026-01-29 02:07:23,158 | INFO     | exitcode: 0
[2026-01-28 21:08:16] 2026-01-29 02:07:23,159 | INFO     | exitmsg: OK
[2026-01-28 21:08:16] 2026-01-29 02:07:23,159 | INFO     | cpuconsumptiontime: 49879 s
[2026-01-28 21:08:16] 2026-01-29 02:07:23,159 | INFO     | nevents: 400
[2026-01-28 21:08:16] 2026-01-29 02:07:23,159 | INFO     | neventsw: 0
[2026-01-28 21:08:16] 2026-01-29 02:07:23,159 | INFO     | pid: 5632
[2026-01-28 21:08:16] 2026-01-29 02:07:23,159 | INFO     | pgrp: 5632
[2026-01-28 21:08:16] 2026-01-29 02:07:23,159 | INFO     | corecount: 12
[2026-01-28 21:08:16] 2026-01-29 02:07:23,160 | INFO     | event service: False
[2026-01-28 21:08:16] 2026-01-29 02:07:23,160 | INFO     | sizes: {0: 2283808, 1: 2284269, 11: 2284269, 4623: 2310425, 4624: 2319423, 4628: 2319801}
[2026-01-28 21:08:16] 2026-01-29 02:07:23,160 | INFO     | --------------------------------------------------
[2026-01-28 21:08:16] 2026-01-29 02:07:23,160 | INFO     | 
[2026-01-28 21:08:16] 2026-01-29 02:07:23,160 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-28 21:08:16] 2026-01-29 02:07:23,192 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,193 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,193 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,193 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,196 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 21:08:16] 2026-01-29 02:07:23,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,196 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 21:08:16] 2026-01-29 02:07:23,196 | INFO     | job 6987880910 has completed (purged errors)
[2026-01-28 21:08:16] 2026-01-29 02:07:23,196 | INFO     | overall cleanup function is called
[2026-01-28 21:08:16] 2026-01-29 02:07:24,200 | INFO     | --- collectZombieJob: --- 10, [5632]
[2026-01-28 21:08:16] 2026-01-29 02:07:24,200 | INFO     | zombie collector waiting for pid 5632
[2026-01-28 21:08:16] 2026-01-29 02:07:24,200 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 21:08:16] 2026-01-29 02:07:24,201 | INFO     | collected zombie processes
[2026-01-28 21:08:16] 2026-01-29 02:07:24,201 | INFO     | will attempt to kill all subprocesses of pid=5632
[2026-01-28 21:08:16] 2026-01-29 02:07:24,291 | INFO     | process IDs to be killed: [5632] (in reverse order)
[2026-01-28 21:08:16] 2026-01-29 02:07:24,344 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 21:08:16] 2026-01-29 02:07:24,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 21:08:16] 2026-01-29 02:07:24,348 | INFO     | did not find any defunct processes belonging to 5632
[2026-01-28 21:08:16] 2026-01-29 02:07:24,350 | INFO     | did not find any defunct processes belonging to 5632
[2026-01-28 21:08:16] 2026-01-29 02:07:24,351 | INFO     | ready for new job
[2026-01-28 21:08:16] 2026-01-29 02:07:24,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 21:08:16] 2026-01-29 02:07:24,352 | INFO     | **************************************
[2026-01-28 21:08:16] 2026-01-29 02:07:24,352 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 21:08:16] 2026-01-29 02:07:24,352 | INFO     | **************************************
[2026-01-28 21:08:16] 2026-01-29 02:07:24,352 | INFO     | 
[2026-01-28 21:08:16] 2026-01-29 02:07:24,353 | INFO     | architecture information:
[2026-01-28 21:08:16] 2026-01-29 02:07:24,353 | INFO     | executing command: cat /etc/os-release
[2026-01-28 21:08:16] 2026-01-29 02:07:24,369 | INFO     | cat /etc/os-release:
[2026-01-28 21:08:16] NAME="CentOS Linux"
[2026-01-28 21:08:16] VERSION="7 (Core)"
[2026-01-28 21:08:16] ID="centos"
[2026-01-28 21:08:16] ID_LIKE="rhel fedora"
[2026-01-28 21:08:16] VERSION_ID="7"
[2026-01-28 21:08:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 21:08:16] ANSI_COLOR="0;31"
[2026-01-28 21:08:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 21:08:16] HOME_URL="https://www.centos.org/"
[2026-01-28 21:08:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 21:08:16] 
[2026-01-28 21:08:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 21:08:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 21:08:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 21:08:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 21:08:16] 
[2026-01-28 21:08:16] 2026-01-29 02:07:24,369 | INFO     | **************************************
[2026-01-28 21:08:16] 2026-01-29 02:07:24,872 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-28 21:08:16] 2026-01-29 02:07:24,888 | INFO     | sufficient remaining disk space (28802285568 B)
[2026-01-28 21:08:16] 2026-01-29 02:07:24,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 21:08:16] 2026-01-29 02:07:24,889 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 21:08:16] 2026-01-29 02:07:24,889 | INFO     | update_server=False
[2026-01-28 21:08:16] 2026-01-29 02:07:24,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 21:08:16] 2026-01-29 02:07:24,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 21:08:16] 2026-01-29 02:07:24,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 21:08:16] 2026-01-29 02:07:24,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 21:08:16] 2026-01-29 02:07:25,304 | INFO     | all data control threads have been joined
[2026-01-28 21:08:16] 2026-01-29 02:07:25,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 21:08:16] 2026-01-29 02:07:25,627 | INFO     | aborting loop
[2026-01-28 21:08:16] 2026-01-29 02:07:25,890 | INFO     | [job] retrieve thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:25,895 | INFO     | [job] queue monitor thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:25,946 | INFO     | all payload control threads have been joined
[2026-01-28 21:08:16] 2026-01-29 02:07:26,222 | INFO     | [data] copytool_in thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:26,247 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:26,266 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:26,309 | INFO     | [data] control thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:26,485 | INFO     | all job control threads have been joined
[2026-01-28 21:08:16] 2026-01-29 02:07:26,633 | INFO     | [job] job monitor thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:26,734 | INFO     | [payload] failed_post thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:26,896 | INFO     | [data] copytool_out thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:26,951 | INFO     | [payload] control thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:27,065 | INFO     | [job] validate thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:27,141 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:27,147 | INFO     | [payload] validate_post thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:27,360 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:27,492 | INFO     | [job] control thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:28,892 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 21:08:16] 2026-01-29 02:07:54,995 | INFO     | PID=32277 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-28 21:08:16] 2026-01-29 02:07:54,995 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 21:08:16] 2026-01-29 02:07:54,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 21:08:16] 2026-01-29 02:07:54,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 21:08:16] 2026-01-29 02:08:10,866 | INFO     | [monitor] cgroup control has ended
[2026-01-28 21:08:16] 2026-01-29 02:08:11,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140472355206976)>', '<ExcThread(monitor, started 140471921792768)>']
[2026-01-28 21:08:16] 2026-01-29 02:08:12,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 21:08:16] 2026-01-29 02:08:12,069 | INFO     | [monitor] control thread has ended
[2026-01-28 21:08:16] 2026-01-29 02:08:16,551 | INFO     | all workflow threads have been joined
[2026-01-28 21:08:16] 2026-01-29 02:08:16,551 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 21:08:16] 2026-01-29 02:08:16,551 | INFO     | traces error code: 0
[2026-01-28 21:08:16] 2026-01-29 02:08:16,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 21:08:16] 2026-01-29 02:08:16,640 [wrapper] ==== pilot stdout END ====
[2026-01-28 21:08:16] 2026-01-29 02:08:16,644 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 21:08:16] 2026-01-29 02:08:16,648 [wrapper] pilotpid: 32277
[2026-01-28 21:08:16] 2026-01-29 02:08:16,651 [wrapper] Pilot exit status: 0
[2026-01-28 21:08:16] 2026-01-29 02:08:16,667 [wrapper] pandaids: 6987880910
[2026-01-28 21:08:16] 2026-01-29 02:08:16,712 [wrapper] cleanup supervisor_pilot 26316 32278
[2026-01-28 21:08:16] 2026-01-29 02:08:16,716 [wrapper] Test setup, not cleaning
[2026-01-28 21:08:16] 2026-01-29 02:08:16,720 [wrapper] apfmon messages muted
[2026-01-28 21:08:16] 2026-01-29 02:08:16,724 [wrapper] ==== wrapper stdout END ====
[2026-01-28 21:08:16] 2026-01-29 02:08:16,728 [wrapper] ==== wrapper stderr END ====
[2026-01-28 21:08:16]  *** Error codes and diagnostics ***
[2026-01-28 21:08:16]     "exeErrorCode": 0,
[2026-01-28 21:08:16]     "exeErrorDiag": "",
[2026-01-28 21:08:16]     "pilotErrorCode": 0,
[2026-01-28 21:08:16]     "pilotErrorDiag": "",
[2026-01-28 21:08:16]  *** Listing of results directory ***
[2026-01-28 21:08:16] total 669872
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas    584422 Jan 28 15:38 pilot3.tar.gz
[2026-01-28 21:08:16] -rwx------ 1 boincer umatlas     36322 Jan 28 15:38 runpilot2-wrapper.sh
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas      5111 Jan 28 15:39 queuedata.json
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas       100 Jan 28 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 21:08:16] -rwxr-xr-x 1 boincer umatlas      7986 Jan 28 19:49 run_atlas
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas       105 Jan 28 19:49 job.xml
[2026-01-28 21:08:16] -rw-r--r-- 2 boincer umatlas 495001676 Jan 28 19:49 EVNT.48317949._000056.pool.root.1
[2026-01-28 21:08:16] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 19:49 start_atlas.sh
[2026-01-28 21:08:16] drwxrwx--x 2 boincer umatlas      4096 Jan 28 19:49 shared
[2026-01-28 21:08:16] -rw-r--r-- 2 boincer umatlas    597760 Jan 28 19:49 input.tar.gz
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas         0 Jan 28 19:49 boinc_lockfile
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas      2522 Jan 28 19:49 pandaJob.out
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas        57 Jan 28 19:49 setup.sh.local
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas   1005755 Jan 28 19:49 agis_schedconf.cvmfs.json
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas   1516246 Jan 28 19:49 agis_ddmendpoints.agis.ALL.json
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas       444 Jan 28 19:50 workernode_map.json
[2026-01-28 21:08:16] drwx------ 5 boincer umatlas      4096 Jan 28 19:50 pilot3
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas      5951 Jan 28 21:02 init_data.xml
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas 184831266 Jan 28 21:06 HITS.48317952._002815.pool.root.1
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas        95 Jan 28 21:07 pilot_heartbeat.json
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas       530 Jan 28 21:07 boinc_task_state.xml
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas      1040 Jan 28 21:07 memory_monitor_summary.json
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas    410809 Jan 28 21:07 log.48317952._002815.job.log.tgz.1
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas      6407 Jan 28 21:07 heartbeat.json
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas        27 Jan 28 21:07 wrapper_checkpoint.txt
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas      8192 Jan 28 21:07 boinc_mmap_file
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas      4742 Jan 28 21:08 pilotlog.txt
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas    673420 Jan 28 21:08 log.48317952._002815.job.log.1
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas       357 Jan 28 21:08 output.list
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas       620 Jan 28 21:08 runtime_log
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas   1105920 Jan 28 21:08 result.tar.gz
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas      9338 Jan 28 21:08 runtime_log.err
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas       656 Jan 28 21:08 F9GMDmQUR58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZ4GKDmHiHHSm.diag
[2026-01-28 21:08:16] -rw-r--r-- 1 boincer umatlas     21487 Jan 28 21:08 stderr.txt
[2026-01-28 21:08:16] HITS file was successfully produced:
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas 184831266 Jan 28 21:06 shared/HITS.pool.root.1
[2026-01-28 21:08:16]  *** Contents of shared directory: ***
[2026-01-28 21:08:16] total 665588
[2026-01-28 21:08:16] -rw-r--r-- 2 boincer umatlas 495001676 Jan 28 19:49 ATLAS.root_0
[2026-01-28 21:08:16] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 19:49 start_atlas.sh
[2026-01-28 21:08:16] -rw-r--r-- 2 boincer umatlas    597760 Jan 28 19:49 input.tar.gz
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas 184831266 Jan 28 21:06 HITS.pool.root.1
[2026-01-28 21:08:16] -rw------- 1 boincer umatlas   1105920 Jan 28 21:08 result.tar.gz
21:08:18 (28309): run_atlas exited; CPU time 49866.134483
21:08:18 (28309): called boinc_finish(0)

</stderr_txt>
]]>

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