Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:50:50 (2904967): wrapper (7.7.26015): starting
10:50:50 (2904967): wrapper: running run_atlas (--nthreads 4)
[2026-01-29 10:50:50] Arguments: --nthreads 4
[2026-01-29 10:50:50] Threads: 4
[2026-01-29 10:50:50] Checking for CVMFS
[2026-01-29 10:50:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 10:50:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 10:50:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 10:50:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 10:50:50] 2.9.2.0 2878143 143 53328 155628 0 50 19540494 36864001 0 130560 0 74321 99.999 1358 596 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-29 10:50:50] CVMFS is ok
[2026-01-29 10:50:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 10:50:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 10:50:50] Further information can be found at the LHC@home message board.
[2026-01-29 10:50:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 10:50:50] Checking for apptainer binary...
[2026-01-29 10:50:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 10:50:50] Running /usr/bin/apptainer --version
[2026-01-29 10:50:50] apptainer version 1.4.1-1.1
[2026-01-29 10:50:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 10:50:50] thA317a
[2026-01-29 10:50:50] apptainer works
[2026-01-29 10:50:50] Set ATHENA_PROC_NUMBER=4
[2026-01-29 10:50:50] Set ATHENA_CORE_NUMBER=4
[2026-01-29 10:50:50] Starting ATLAS job with PandaID=6986365041
[2026-01-29 10:50:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 12:01:20]  *** The last 200 lines of the pilot log: ***
[2026-01-29 12:01:20] VERSION="7 (Core)"
[2026-01-29 12:01:20] ID="centos"
[2026-01-29 12:01:20] ID_LIKE="rhel fedora"
[2026-01-29 12:01:20] VERSION_ID="7"
[2026-01-29 12:01:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 12:01:20] ANSI_COLOR="0;31"
[2026-01-29 12:01:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 12:01:20] HOME_URL="https://www.centos.org/"
[2026-01-29 12:01:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 12:01:20] 
[2026-01-29 12:01:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 12:01:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 12:01:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 12:01:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 12:01:20] 
[2026-01-29 12:01:20] 2026-01-29 11:00:48,959 | INFO     | **************************************
[2026-01-29 12:01:20] 2026-01-29 11:00:49,462 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-29 12:01:20] 2026-01-29 11:00:49,473 | INFO     | sufficient remaining disk space (235794333696 B)
[2026-01-29 12:01:20] 2026-01-29 11:00:49,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 12:01:20] 2026-01-29 11:00:49,473 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 12:01:20] 2026-01-29 11:00:49,473 | INFO     | update_server=False
[2026-01-29 12:01:20] 2026-01-29 11:00:49,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 12:01:20] 2026-01-29 11:00:49,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 12:01:20] 2026-01-29 11:00:49,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 12:01:20] 2026-01-29 11:00:49,536 | INFO     | all job control threads have been joined
[2026-01-29 12:01:20] 2026-01-29 11:00:49,719 | INFO     | all payload control threads have been joined
[2026-01-29 12:01:20] 2026-01-29 11:00:49,722 | WARNING  | process 2913561 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 12:01:20] 2026-01-29 11:00:49,756 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 12:01:20] 2026-01-29 11:00:49,798 | INFO     | number of running child processes to parent process 2913561: 1
[2026-01-29 12:01:20] 2026-01-29 11:00:49,798 | INFO     | maximum number of monitored processes: 6
[2026-01-29 12:01:20] 2026-01-29 11:00:49,799 | INFO     | aborting job monitoring since job object (job id=6986365041) has expired
[2026-01-29 12:01:20] 2026-01-29 11:00:49,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 12:01:20] 2026-01-29 11:00:49,799 | INFO     | will abort loop
[2026-01-29 12:01:20] 2026-01-29 11:00:50,476 | INFO     | [job] retrieve thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:50,479 | INFO     | [job] queue monitor thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:50,521 | INFO     | all data control threads have been joined
[2026-01-29 12:01:20] 2026-01-29 11:00:50,542 | INFO     | [job] control thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:50,547 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:50,576 | INFO     | [data] copytool_in thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:50,722 | INFO     | [payload] control thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:50,804 | INFO     | [job] job monitor thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:50,974 | INFO     | [payload] validate_post thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:51,102 | INFO     | [payload] failed_post thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:51,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 12:01:20] 2026-01-29 11:00:51,480 | INFO     | [data] copytool_out thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:51,527 | INFO     | [data] control thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:51,917 | INFO     | [job] validate thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:51,938 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:51,952 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:00:55,365 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:01:00,241 | INFO     | job.realtimelogging is not enabled
[2026-01-29 12:01:20] 2026-01-29 11:01:01,247 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 12:01:20] 2026-01-29 11:01:04,612 | INFO     | [monitor] cgroup control has ended
[2026-01-29 12:01:20] 2026-01-29 11:01:05,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140219828315968)>', '<ExcThread(monitor, started 140219038807808)>']
[2026-01-29 12:01:20] 2026-01-29 11:01:10,919 | INFO     | all workflow threads have been joined
[2026-01-29 12:01:20] 2026-01-29 11:01:10,919 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 12:01:20] 2026-01-29 11:01:10,920 | INFO     | traces error code: 0
[2026-01-29 12:01:20] 2026-01-29 11:01:10,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 12:01:20] 2026-01-29 11:01:20,056 | INFO     | PID=2909066 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-29 12:01:20] 2026-01-29 11:01:20,056 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 12:01:20] 2026-01-29 11:01:20,056 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 12:01:20] 2026-01-29 11:01:20,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 12:01:20] 2026-01-29 11:01:20,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 12:01:20] 2026-01-29 11:01:20,056 | CRITICAL | thread 'MainThread' is not alive
[2026-01-29 12:01:20] 2026-01-29 11:01:20,056 | INFO     | [monitor] control thread has ended
[2026-01-29 12:01:20] 2026-01-29 11:01:20,101 [wrapper] ==== pilot stdout END ====
[2026-01-29 12:01:20] 2026-01-29 11:01:20,104 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 12:01:20] 2026-01-29 11:01:20,106 [wrapper] pilotpid: 2909066
[2026-01-29 12:01:20] 2026-01-29 11:01:20,108 [wrapper] Pilot exit status: 0
[2026-01-29 12:01:20] 2026-01-29 11:01:20,115 [wrapper] pandaids: 6986365041
[2026-01-29 12:01:20] 2026-01-29 11:01:20,132 [wrapper] cleanup supervisor_pilot 2918716 2909067
[2026-01-29 12:01:20] 2026-01-29 11:01:20,134 [wrapper] Test setup, not cleaning
[2026-01-29 12:01:20] 2026-01-29 11:01:20,136 [wrapper] apfmon messages muted
[2026-01-29 12:01:20] 2026-01-29 11:01:20,139 [wrapper] ==== wrapper stdout END ====
[2026-01-29 12:01:20] 2026-01-29 11:01:20,141 [wrapper] ==== wrapper stderr END ====
[2026-01-29 12:01:20]  *** Error codes and diagnostics ***
[2026-01-29 12:01:20]     "exeErrorCode": 0,
[2026-01-29 12:01:20]     "exeErrorDiag": "",
[2026-01-29 12:01:20]     "pilotErrorCode": 0,
[2026-01-29 12:01:20]     "pilotErrorDiag": "",
[2026-01-29 12:01:20]  *** Listing of results directory ***
[2026-01-29 12:01:20] total 733148
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc    584422 Jan 28 19:37 pilot3.tar.gz
[2026-01-29 12:01:20] -rwx------ 1 boinc boinc     36322 Jan 28 19:38 runpilot2-wrapper.sh
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc      5111 Jan 28 19:41 queuedata.json
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc       100 Jan 29 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 12:01:20] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 10:50 run_atlas
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc       105 Jan 29 10:50 job.xml
[2026-01-29 12:01:20] -rw-r--r-- 2 boinc boinc 544434989 Jan 29 10:50 EVNT.48317969._000062.pool.root.1
[2026-01-29 12:01:20] -rw-r--r-- 2 boinc boinc    597760 Jan 29 10:50 input.tar.gz
[2026-01-29 12:01:20] -rw-r--r-- 2 boinc boinc     15845 Jan 29 10:50 start_atlas.sh
[2026-01-29 12:01:20] drwxrwx--x 2 boinc boinc      4096 Jan 29 10:50 shared
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc         0 Jan 29 10:50 boinc_setup_complete
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc      6439 Jan 29 10:50 init_data.xml
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc         0 Jan 29 10:50 boinc_lockfile
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc      2514 Jan 29 10:50 pandaJob.out
[2026-01-29 12:01:20] -rw------- 1 boinc boinc   1005730 Jan 29 10:50 agis_schedconf.cvmfs.json
[2026-01-29 12:01:20] -rw------- 1 boinc boinc   1516246 Jan 29 10:50 agis_ddmendpoints.agis.ALL.json
[2026-01-29 12:01:20] -rw------- 1 boinc boinc       424 Jan 29 10:50 workernode_map.json
[2026-01-29 12:01:20] drwx------ 5 boinc boinc      4096 Jan 29 10:51 pilot3
[2026-01-29 12:01:20] -rw------- 1 boinc boinc 200534142 Jan 29 12:00 HITS.48317971._003112.pool.root.1
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc       530 Jan 29 12:00 boinc_task_state.xml
[2026-01-29 12:01:20] -rw------- 1 boinc boinc      1018 Jan 29 12:00 memory_monitor_summary.json
[2026-01-29 12:01:20] -rw------- 1 boinc boinc    299620 Jan 29 12:00 log.48317971._003112.job.log.tgz.1
[2026-01-29 12:01:20] -rw------- 1 boinc boinc      6303 Jan 29 12:00 heartbeat.json
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc      8192 Jan 29 12:01 boinc_mmap_file
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc        27 Jan 29 12:01 wrapper_checkpoint.txt
[2026-01-29 12:01:20] -rw------- 1 boinc boinc       817 Jan 29 12:01 pilotlog.txt
[2026-01-29 12:01:20] -rw------- 1 boinc boinc        95 Jan 29 12:01 pilot_heartbeat.json
[2026-01-29 12:01:20] -rw------- 1 boinc boinc    623619 Jan 29 12:01 log.48317971._003112.job.log.1
[2026-01-29 12:01:20] -rw------- 1 boinc boinc       357 Jan 29 12:01 output.list
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc       620 Jan 29 12:01 runtime_log
[2026-01-29 12:01:20] -rw------- 1 boinc boinc    942080 Jan 29 12:01 result.tar.gz
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc      8901 Jan 29 12:01 runtime_log.err
[2026-01-29 12:01:20] -rw------- 1 boinc boinc       658 Jan 29 12:01 MgXKDmHcP58n9Rq4apOajLDm4fhM0noT9bVooX4SDmzsGKDmncHF6m.diag
[2026-01-29 12:01:20] -rw-r--r-- 1 boinc boinc      9479 Jan 29 12:01 stderr.txt
[2026-01-29 12:01:20] HITS file was successfully produced:
[2026-01-29 12:01:20] -rw------- 1 boinc boinc 200534142 Jan 29 12:00 shared/HITS.pool.root.1
[2026-01-29 12:01:20]  *** Contents of shared directory: ***
[2026-01-29 12:01:20] total 729040
[2026-01-29 12:01:20] -rw-r--r-- 2 boinc boinc 544434989 Jan 29 10:50 ATLAS.root_0
[2026-01-29 12:01:20] -rw-r--r-- 2 boinc boinc    597760 Jan 29 10:50 input.tar.gz
[2026-01-29 12:01:20] -rw-r--r-- 2 boinc boinc     15845 Jan 29 10:50 start_atlas.sh
[2026-01-29 12:01:20] -rw------- 1 boinc boinc 200534142 Jan 29 12:00 HITS.pool.root.1
[2026-01-29 12:01:20] -rw------- 1 boinc boinc    942080 Jan 29 12:01 result.tar.gz
12:01:21 (2904967): run_atlas exited; CPU time 15715.777485
12:01:21 (2904967): called boinc_finish(0)

</stderr_txt>
]]>

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