Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:08:44 (3400630): wrapper (7.7.26015): starting
02:08:44 (3400630): wrapper: running run_atlas (--nthreads 4)
[2026-01-29 02:08:44] Arguments: --nthreads 4
[2026-01-29 02:08:44] Threads: 4
[2026-01-29 02:08:44] Checking for CVMFS
[2026-01-29 02:08:44] No cvmfs_config command found, will try listing directly
[2026-01-29 02:08:44] CVMFS is ok
[2026-01-29 02:08:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 02:08:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 02:08:44] Further information can be found at the LHC@home message board.
[2026-01-29 02:08:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 02:08:44] Checking for apptainer binary...
[2026-01-29 02:08:44] which: no apptainer in ((null))
[2026-01-29 02:08:44] apptainer is not installed, using version from CVMFS
[2026-01-29 02:08:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 02:08:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-29 02:08:44] apptainer works
[2026-01-29 02:08:44] Set ATHENA_PROC_NUMBER=4
[2026-01-29 02:08:44] Set ATHENA_CORE_NUMBER=4
[2026-01-29 02:08:44] Starting ATLAS job with PandaID=6986153271
[2026-01-29 02:08:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 04:53:48]  *** The last 200 lines of the pilot log: ***
[2026-01-29 04:53:48] 2026-01-29 03:49:23,100 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2676538/.job.ad'
[2026-01-29 04:53:48] 2026-01-29 03:49:23,100 | INFO     | total number of processed events: 400 (read)
[2026-01-29 04:53:48] 2026-01-29 03:49:23,124 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6986153271/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 04:53:48] 2026-01-29 03:49:23,124 | INFO     | extracted standard info from prmon json
[2026-01-29 04:53:48] 2026-01-29 03:49:23,125 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 04:53:48] 2026-01-29 03:49:23,125 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 04:53:48] 2026-01-29 03:49:23,125 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 04:53:48] 2026-01-29 03:49:23,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 04:53:48] 2026-01-29 03:49:23,128 | INFO     | fitting pss+swap vs Time
[2026-01-29 04:53:48] 2026-01-29 03:49:23,129 | INFO     | sum of square deviations: 1223016419.5
[2026-01-29 04:53:48] 2026-01-29 03:49:23,130 | INFO     | sum of deviations: 16001117491.5
[2026-01-29 04:53:48] 2026-01-29 03:49:23,130 | INFO     | mean x: 1769653761.5
[2026-01-29 04:53:48] 2026-01-29 03:49:23,130 | INFO     | mean y: 2329958.234177215
[2026-01-29 04:53:48] 2026-01-29 03:49:23,130 | INFO     | intersect: -23150619835.04243
[2026-01-29 04:53:48] 2026-01-29 03:49:23,130 | INFO     | chi2: 2.1943037217810377
[2026-01-29 04:53:48] 2026-01-29 03:49:23,131 | INFO     | sum of square deviations: 1110539892.0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,132 | INFO     | sum of deviations: 25268926822.0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,132 | INFO     | mean x: 1769653609.0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,132 | INFO     | mean y: 2342171.385620915
[2026-01-29 04:53:48] 2026-01-29 03:49:23,132 | INFO     | intersect: -40263881372.89135
[2026-01-29 04:53:48] 2026-01-29 03:49:23,132 | INFO     | chi2: 1.381450269918917
[2026-01-29 04:53:48] 2026-01-29 03:49:23,132 | INFO     | current chi2=1.381450269918917 (change=37.0437986224786 %)
[2026-01-29 04:53:48] 2026-01-29 03:49:23,132 | INFO     | sum of square deviations: 1005179777.0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,133 | INFO     | sum of deviations: 24328290321.5
[2026-01-29 04:53:48] 2026-01-29 03:49:23,133 | INFO     | mean x: 1769653456.5
[2026-01-29 04:53:48] 2026-01-29 03:49:23,133 | INFO     | mean y: 2340809.3175675673
[2026-01-29 04:53:48] 2026-01-29 03:49:23,134 | INFO     | intersect: -42828448312.47549
[2026-01-29 04:53:48] 2026-01-29 03:49:23,134 | INFO     | chi2: 1.3821621485910176
[2026-01-29 04:53:48] 2026-01-29 03:49:23,134 | INFO     | current chi2=1.3821621485910176 (change=-0.0515312557825425 %)
[2026-01-29 04:53:48] 2026-01-29 03:49:23,134 | INFO     | right removable region: 147
[2026-01-29 04:53:48] 2026-01-29 03:49:23,134 | INFO     | sum of square deviations: 1110539892.0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,135 | INFO     | sum of deviations: -5666390711.0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,135 | INFO     | mean x: 1769653914.0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,135 | INFO     | mean y: 2358903.908496732
[2026-01-29 04:53:48] 2026-01-29 03:49:23,135 | INFO     | intersect: 9031796362.400436
[2026-01-29 04:53:48] 2026-01-29 03:49:23,136 | INFO     | chi2: 0.8395280144623806
[2026-01-29 04:53:48] 2026-01-29 03:49:23,136 | INFO     | current chi2=0.8395280144623806 (change=61.740573735117856 %)
[2026-01-29 04:53:48] 2026-01-29 03:49:23,136 | INFO     | sum of square deviations: 1005179777.0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,137 | INFO     | sum of deviations: -6467010465.0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,137 | INFO     | mean x: 1769654066.5
[2026-01-29 04:53:48] 2026-01-29 03:49:23,137 | INFO     | mean y: 2360055.445945946
[2026-01-29 04:53:48] 2026-01-29 03:49:23,137 | INFO     | intersect: 11387757602.580746
[2026-01-29 04:53:48] 2026-01-29 03:49:23,137 | INFO     | chi2: 0.838867238908896
[2026-01-29 04:53:48] 2026-01-29 03:49:23,137 | INFO     | current chi2=0.838867238908896 (change=0.0787079814016317 %)
[2026-01-29 04:53:48] 2026-01-29 03:49:23,138 | INFO     | left removable region: 20
[2026-01-29 04:53:48] 2026-01-29 03:49:23,138 | INFO     | sum of square deviations: 635130048.0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,138 | INFO     | sum of deviations: 2049418281.0000002
[2026-01-29 04:53:48] 2026-01-29 03:49:23,139 | INFO     | mean x: 1769654036.0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,139 | INFO     | mean y: 2374990.401574803
[2026-01-29 04:53:48] 2026-01-29 03:49:23,139 | INFO     | intersect: -5707890716.353071
[2026-01-29 04:53:48] 2026-01-29 03:49:23,139 | INFO     | chi2: 0.00022584553777952286
[2026-01-29 04:53:48] 2026-01-29 03:49:23,139 | INFO     | current memory leak: 3.23 B/s (using 127 data points, chi2=0.00)
[2026-01-29 04:53:48] 2026-01-29 03:49:23,139 | INFO     | could have reported an average CPU frequency of 2677 MHz (9 samples)
[2026-01-29 04:53:48] 2026-01-29 03:49:23,140 | INFO     | ..............................
[2026-01-29 04:53:48] 2026-01-29 03:49:23,140 | INFO     | . Timing measurements:
[2026-01-29 04:53:48] 2026-01-29 03:49:23,140 | INFO     | . get job = 0 s
[2026-01-29 04:53:48] 2026-01-29 03:49:23,140 | INFO     | . initial setup = 8 s
[2026-01-29 04:53:48] 2026-01-29 03:49:23,140 | INFO     | . payload setup = 8 s
[2026-01-29 04:53:48] 2026-01-29 03:49:23,140 | INFO     | . stage-in = 0 s
[2026-01-29 04:53:48] 2026-01-29 03:49:23,140 | INFO     | . payload execution = 9590 s
[2026-01-29 04:53:48] 2026-01-29 03:49:23,140 | INFO     | . stage-out = 0 s
[2026-01-29 04:53:48] 2026-01-29 03:49:23,140 | INFO     | . log creation = 0 s
[2026-01-29 04:53:48] 2026-01-29 03:49:23,140 | INFO     | ..............................
[2026-01-29 04:53:48] 2026-01-29 03:49:23,231 | INFO     | 
[2026-01-29 04:53:48] 2026-01-29 03:49:23,231 | INFO     | job summary report
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | --------------------------------------------------
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | PanDA job id: 6986153271
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | task id: 48310620
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | errors: (none)
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | pilot state: finished 
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | transexitcode: 0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | exeerrorcode: 0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | exeerrordiag: 
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | exitcode: 0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | exitmsg: OK
[2026-01-29 04:53:48] 2026-01-29 03:49:23,232 | INFO     | cpuconsumptiontime: 36726 s
[2026-01-29 04:53:48] 2026-01-29 03:49:23,233 | INFO     | nevents: 400
[2026-01-29 04:53:48] 2026-01-29 03:49:23,233 | INFO     | neventsw: 0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,233 | INFO     | pid: 3410130
[2026-01-29 04:53:48] 2026-01-29 03:49:23,233 | INFO     | pgrp: 3410130
[2026-01-29 04:53:48] 2026-01-29 03:49:23,233 | INFO     | corecount: 4
[2026-01-29 04:53:48] 2026-01-29 03:49:23,233 | INFO     | event service: False
[2026-01-29 04:53:48] 2026-01-29 03:49:23,233 | INFO     | sizes: {0: 2284193, 11: 2284193, 9602: 2313149, 9603: 2313148, 9604: 2322280, 9606: 2322482}
[2026-01-29 04:53:48] 2026-01-29 03:49:23,233 | INFO     | --------------------------------------------------
[2026-01-29 04:53:48] 2026-01-29 03:49:23,233 | INFO     | 
[2026-01-29 04:53:48] 2026-01-29 03:49:23,233 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2026-01-29 04:53:48] 2026-01-29 03:49:23,265 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,266 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,266 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,266 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,266 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,266 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,266 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,267 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 04:53:48] 2026-01-29 03:49:23,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,268 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 04:53:48] 2026-01-29 03:49:23,268 | INFO     | job 6986153271 has completed (purged errors)
[2026-01-29 04:53:48] 2026-01-29 03:49:23,268 | INFO     | overall cleanup function is called
[2026-01-29 04:53:48] 2026-01-29 03:49:24,278 | INFO     | --- collectZombieJob: --- 10, [3410130]
[2026-01-29 04:53:48] 2026-01-29 03:49:24,278 | INFO     | zombie collector waiting for pid 3410130
[2026-01-29 04:53:48] 2026-01-29 03:49:24,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 04:53:48] 2026-01-29 03:49:24,278 | INFO     | collected zombie processes
[2026-01-29 04:53:48] 2026-01-29 03:49:24,278 | INFO     | will attempt to kill all subprocesses of pid=3410130
[2026-01-29 04:53:48] 2026-01-29 03:49:24,702 | INFO     | PID=3405024 has CPU usage=20.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-29 04:53:48] 2026-01-29 03:49:24,703 | INFO     | .. there are 9 such processes running
[2026-01-29 04:53:48] 2026-01-29 03:49:25,229 | INFO     | process IDs to be killed: [3410130] (in reverse order)
[2026-01-29 04:53:48] 2026-01-29 03:49:25,466 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 04:53:48] 2026-01-29 03:49:25,466 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 04:53:48] 2026-01-29 03:49:25,496 | INFO     | did not find any defunct processes belonging to 3410130
[2026-01-29 04:53:48] 2026-01-29 03:49:25,523 | INFO     | did not find any defunct processes belonging to 3410130
[2026-01-29 04:53:48] 2026-01-29 03:49:25,523 | INFO     | ready for new job
[2026-01-29 04:53:48] 2026-01-29 03:49:25,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 04:53:48] 2026-01-29 03:49:25,525 | INFO     | **************************************
[2026-01-29 04:53:48] 2026-01-29 03:49:25,528 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 04:53:48] 2026-01-29 03:49:25,529 | INFO     | **************************************
[2026-01-29 04:53:48] 2026-01-29 03:49:25,529 | INFO     | 
[2026-01-29 04:53:48] 2026-01-29 03:49:25,537 | INFO     | architecture information:
[2026-01-29 04:53:48] 2026-01-29 03:49:25,537 | INFO     | executing command: cat /etc/os-release
[2026-01-29 04:53:48] 2026-01-29 03:49:25,559 | INFO     | cat /etc/os-release:
[2026-01-29 04:53:48] NAME="CentOS Linux"
[2026-01-29 04:53:48] VERSION="7 (Core)"
[2026-01-29 04:53:48] ID="centos"
[2026-01-29 04:53:48] ID_LIKE="rhel fedora"
[2026-01-29 04:53:48] VERSION_ID="7"
[2026-01-29 04:53:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 04:53:48] ANSI_COLOR="0;31"
[2026-01-29 04:53:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 04:53:48] HOME_URL="https://www.centos.org/"
[2026-01-29 04:53:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 04:53:48] 
[2026-01-29 04:53:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 04:53:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 04:53:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 04:53:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 04:53:48] 
[2026-01-29 04:53:48] 2026-01-29 03:49:25,560 | INFO     | **************************************
[2026-01-29 04:53:48] 2026-01-29 03:49:26,063 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2026-01-29 04:53:48] 2026-01-29 03:49:26,089 | INFO     | sufficient remaining disk space (3299297198080 B)
[2026-01-29 04:53:48] 2026-01-29 03:49:26,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 04:53:48] 2026-01-29 03:49:26,089 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 04:53:48] 2026-01-29 03:49:26,089 | INFO     | update_server=False
[2026-01-29 04:53:48] 2026-01-29 03:49:26,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 04:53:48] 2026-01-29 03:49:26,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 04:53:48] 2026-01-29 03:49:26,090 | INFO     | aborting loop
[2026-01-29 04:53:48] 2026-01-29 03:49:26,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 04:53:48] 2026-01-29 03:49:26,415 | INFO     | all job control threads have been joined
[2026-01-29 04:53:48] 2026-01-29 03:49:26,448 | INFO     | all data control threads have been joined
[2026-01-29 04:53:48] 2026-01-29 03:49:26,461 | INFO     | all payload control threads have been joined
[2026-01-29 04:53:48] 2026-01-29 03:49:26,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 04:53:48] 2026-01-29 03:49:27,095 | INFO     | [job] retrieve thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:27,096 | INFO     | [job] job monitor thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:27,124 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:27,421 | INFO     | [job] control thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:27,454 | INFO     | [data] control thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:27,466 | INFO     | [payload] control thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:27,518 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:27,571 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:27,747 | INFO     | [data] copytool_in thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:27,948 | INFO     | [payload] failed_post thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:28,111 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:28,114 | INFO     | [data] copytool_out thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:28,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 04:53:48] 2026-01-29 03:49:28,438 | INFO     | [job] validate thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:28,530 | INFO     | [payload] validate_post thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:29,249 | INFO     | [job] queue monitor thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:30,706 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 04:53:48] 2026-01-29 03:49:57,672 | INFO     | PID=3405024 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-29 04:53:48] 2026-01-29 03:49:57,672 | INFO     | .. there are 9 such processes running
[2026-01-29 04:53:48] 2026-01-29 03:49:57,676 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 04:53:48] 2026-01-29 03:49:57,676 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 04:53:48] 2026-01-29 03:49:57,676 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 04:53:48] 2026-01-29 03:50:19,753 | INFO     | [monitor] cgroup control has ended
[2026-01-29 04:53:48] 2026-01-29 03:50:20,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22537877796672)>', '<ExcThread(monitor, started 22537301911296)>']
[2026-01-29 04:53:48] 2026-01-29 03:50:20,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 04:53:48] 2026-01-29 03:50:20,775 | INFO     | [monitor] control thread has ended
[2026-01-29 04:53:48] 2026-01-29 03:50:25,670 | INFO     | all workflow threads have been joined
[2026-01-29 04:53:48] 2026-01-29 03:50:25,670 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 04:53:48] 2026-01-29 03:50:25,670 | INFO     | traces error code: 0
[2026-01-29 04:53:48] 2026-01-29 03:50:25,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 04:53:48] 2026-01-29 03:50:25,803 [wrapper] ==== pilot stdout END ====
[2026-01-29 04:53:48] 2026-01-29 03:50:25,807 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 04:53:48] 2026-01-29 03:50:25,811 [wrapper] pilotpid: 3405024
[2026-01-29 04:53:48] 2026-01-29 03:50:25,817 [wrapper] Pilot exit status: 0
[2026-01-29 04:53:48] 2026-01-29 03:50:25,833 [wrapper] pandaids: 6986153271
[2026-01-29 04:53:48] 2026-01-29 03:50:26,001 [wrapper] cleanup supervisor_pilot 3603816 3405025
[2026-01-29 04:53:48] 2026-01-29 03:50:26,005 [wrapper] Test setup, not cleaning
[2026-01-29 04:53:48] 2026-01-29 03:50:26,009 [wrapper] apfmon messages muted
[2026-01-29 04:53:48] 2026-01-29 03:50:26,013 [wrapper] ==== wrapper stdout END ====
[2026-01-29 04:53:48] 2026-01-29 03:50:26,017 [wrapper] ==== wrapper stderr END ====
[2026-01-29 04:53:48]  *** Error codes and diagnostics ***
[2026-01-29 04:53:48]     "exeErrorCode": 0,
[2026-01-29 04:53:48]     "exeErrorDiag": "",
[2026-01-29 04:53:48]     "pilotErrorCode": 0,
[2026-01-29 04:53:48]     "pilotErrorDiag": "",
[2026-01-29 04:53:48]  *** Listing of results directory ***
[2026-01-29 04:53:48] total 715276
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc      5111 Jan 28 19:37 queuedata.json
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc    584422 Jan 28 19:37 pilot3.tar.gz
[2026-01-29 04:53:48] -rwx------ 1 boinc boinc     36322 Jan 28 19:37 runpilot2-wrapper.sh
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc       100 Jan 29 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 04:53:48] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 00:11 run_atlas
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc       105 Jan 29 00:11 job.xml
[2026-01-29 04:53:48] -rw-r--r-- 2 boinc boinc 526697837 Jan 29 02:08 EVNT.48310618._000036.pool.root.1
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc      6687 Jan 29 02:08 init_data.xml
[2026-01-29 04:53:48] drwxrwx--x 2 boinc boinc      4096 Jan 29 02:08 shared
[2026-01-29 04:53:48] -rw-r--r-- 2 boinc boinc    597754 Jan 29 02:08 input.tar.gz
[2026-01-29 04:53:48] -rw-r--r-- 2 boinc boinc     15845 Jan 29 02:08 start_atlas.sh
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc         0 Jan 29 02:08 boinc_lockfile
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc      2522 Jan 29 02:08 pandaJob.out
[2026-01-29 04:53:48] -rw------- 1 boinc boinc   1005755 Jan 29 02:08 agis_schedconf.cvmfs.json
[2026-01-29 04:53:48] -rw------- 1 boinc boinc   1516246 Jan 29 02:08 agis_ddmendpoints.agis.ALL.json
[2026-01-29 04:53:48] -rw------- 1 boinc boinc       442 Jan 29 02:09 workernode_map.json
[2026-01-29 04:53:48] drwx------ 5 boinc boinc      4096 Jan 29 02:09 pilot3
[2026-01-29 04:53:48] -rw------- 1 boinc boinc 198370457 Jan 29 04:48 HITS.48310620._001607.pool.root.1
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc       530 Jan 29 04:48 boinc_task_state.xml
[2026-01-29 04:53:48] -rw------- 1 boinc boinc      1026 Jan 29 04:49 memory_monitor_summary.json
[2026-01-29 04:53:48] -rw------- 1 boinc boinc    362724 Jan 29 04:49 log.48310620._001607.job.log.tgz.1
[2026-01-29 04:53:48] -rw------- 1 boinc boinc      6343 Jan 29 04:49 heartbeat.json
[2026-01-29 04:53:48] -rw------- 1 boinc boinc        95 Jan 29 04:49 pilot_heartbeat.json
[2026-01-29 04:53:48] -rw------- 1 boinc boinc      4830 Jan 29 04:50 pilotlog.txt
[2026-01-29 04:53:48] -rw------- 1 boinc boinc   1354985 Jan 29 04:50 log.48310620._001607.job.log.1
[2026-01-29 04:53:48] -rw------- 1 boinc boinc       357 Jan 29 04:50 output.list
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc       620 Jan 29 04:50 runtime_log
[2026-01-29 04:53:48] -rw------- 1 boinc boinc   1730560 Jan 29 04:50 result.tar.gz
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc      9204 Jan 29 04:50 runtime_log.err
[2026-01-29 04:53:48] -rw------- 1 boinc boinc       659 Jan 29 04:50 38FNDm8aP58n9Rq4apOajLDm4fhM0noT9bVooX4SDm2kGKDmhqfpPn.diag
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc        27 Jan 29 04:53 wrapper_checkpoint.txt
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc      8192 Jan 29 04:53 boinc_mmap_file
[2026-01-29 04:53:48] -rw-r--r-- 1 boinc boinc     20968 Jan 29 04:53 stderr.txt
[2026-01-29 04:53:48] HITS file was successfully produced:
[2026-01-29 04:53:48] -rw------- 1 boinc boinc 198370457 Jan 29 04:48 shared/HITS.pool.root.1
[2026-01-29 04:53:48]  *** Contents of shared directory: ***
[2026-01-29 04:53:48] total 710380
[2026-01-29 04:53:48] -rw-r--r-- 2 boinc boinc 526697837 Jan 29 02:08 ATLAS.root_0
[2026-01-29 04:53:48] -rw-r--r-- 2 boinc boinc    597754 Jan 29 02:08 input.tar.gz
[2026-01-29 04:53:48] -rw-r--r-- 2 boinc boinc     15845 Jan 29 02:08 start_atlas.sh
[2026-01-29 04:53:48] -rw------- 1 boinc boinc 198370457 Jan 29 04:48 HITS.pool.root.1
[2026-01-29 04:53:48] -rw------- 1 boinc boinc   1730560 Jan 29 04:50 result.tar.gz
04:53:49 (3400630): run_atlas exited; CPU time 37351.836561
04:53:49 (3400630): called boinc_finish(0)

</stderr_txt>
]]>

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