Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-03 17:18:28 (11748): vboxwrapper version 26210
2026-02-03 17:18:28 (11748): BOINC client version: 8.2.8
2026-02-03 17:18:29 (11748): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-02-03 17:18:29 (11748): Successfully copied 'init_data.xml' to the shared directory.
2026-02-03 17:18:29 (11748): Create VM. (boinc_d1bf4c1436393c0e, slot#1)
2026-02-03 17:18:30 (11748): Setting Memory Size for VM. (4400MB)
2026-02-03 17:18:30 (11748): Setting CPU Count for VM. (4)
2026-02-03 17:18:30 (11748): Setting Chipset Options for VM.
2026-02-03 17:18:31 (11748): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-03 17:18:31 (11748): Setting Boot Options for VM.
2026-02-03 17:18:31 (11748): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-03 17:18:32 (11748): Enabling VM Network Access.
2026-02-03 17:18:32 (11748): Disabling USB Support for VM.
2026-02-03 17:18:32 (11748): Disabling COM Port Support for VM.
2026-02-03 17:18:33 (11748): Disabling LPT Port Support for VM.
2026-02-03 17:18:33 (11748): Disabling Audio Support for VM.
2026-02-03 17:18:33 (11748): Disabling Clipboard Support for VM.
2026-02-03 17:18:33 (11748): Disabling Drag and Drop Support for VM.
2026-02-03 17:18:34 (11748): Adding storage controller(s) to VM.
2026-02-03 17:18:34 (11748): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-03 17:18:35 (11748): Adding VirtualBox Guest Additions to VM.
2026-02-03 17:18:35 (11748): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-03 17:18:36 (11748): forwarding host port 49860 to guest port 80
2026-02-03 17:18:36 (11748): Enabling remote desktop for VM.
2026-02-03 17:18:36 (11748): Required extension pack not installed, remote desktop not enabled.
2026-02-03 17:18:36 (11748): Enabling shared directory for VM.
2026-02-03 17:18:37 (11748): Starting VM using VBoxManage interface. (boinc_d1bf4c1436393c0e, slot#1)
2026-02-03 17:18:42 (11748): Successfully started VM. (PID = '10220')
2026-02-03 17:18:42 (11748): Reporting VM Process ID to BOINC.
2026-02-03 17:18:42 (11748): Guest Log: BIOS: VirtualBox 6.1.34
2026-02-03 17:18:42 (11748): Guest Log: CPUID EDX: 0x178bfbff
2026-02-03 17:18:42 (11748): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-03 17:18:42 (11748): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-03 17:18:42 (11748): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-03 17:18:42 (11748): Detected: Web Application Enabled (http://localhost:49860)
2026-02-03 17:18:42 (11748): Preference change detected
2026-02-03 17:18:42 (11748): Setting CPU throttle for VM. (100%)
2026-02-03 17:18:43 (11748): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-03 17:18:45 (11748): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-03 17:18:45 (11748): Guest Log: BIOS: Booting from Hard Disk...
2026-02-03 17:18:48 (11748): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-03 17:18:48 (11748): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-03 17:18:48 (11748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-03 17:18:56 (11748): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-03 17:18:56 (11748): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-03 17:19:07 (11748): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-03 17:19:07 (11748): Guest Log: 00:00:00.000259 main     Log opened 2026-02-03T17:19:03.949608000Z
2026-02-03 17:19:07 (11748): Guest Log: 00:00:00.000409 main     OS Product: Linux
2026-02-03 17:19:07 (11748): Guest Log: 00:00:00.000461 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-03 17:19:07 (11748): Guest Log: 00:00:00.000509 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-03 17:19:07 (11748): Guest Log: 00:00:00.000590 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-03 17:19:07 (11748): Guest Log: 00:00:00.000592 main     Process ID: 1322
2026-02-03 17:19:07 (11748): Guest Log: 00:00:00.000593 main     Package type: LINUX_64BITS_GENERIC
2026-02-03 17:19:07 (11748): Guest Log: 00:00:00.002005 main     5.2.32 r132073 started. Verbose level = 0
2026-02-03 17:19:07 (11748): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-03 17:19:07 (11748): Guest Log: [INFO] Mounting shared directory
2026-02-03 17:19:07 (11748): Guest Log: [INFO] Checking for init_data.xml
2026-02-03 17:19:12 (11748): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-03 17:19:12 (11748): Guest Log: [INFO] Detected branch: prod
2026-02-03 17:19:12 (11748): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-03 17:19:12 (11748): Guest Log: Copying input files
2026-02-03 17:19:16 (11748): Guest Log: Copied input files into RunAtlas.
2026-02-03 17:19:16 (11748): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-03 17:19:16 (11748): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-03 17:19:16 (11748): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-03 17:19:16 (11748): Guest Log: Further information can be found at the LHC@home message board.
2026-02-03 17:19:17 (11748): Guest Log: 00:00:10.020696 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 841 263 000ns (GuestNow=1 770 135 556 114 361 000 ns GuestLast=1 770 139 143 955 624 000 ns fSetTimeLastLoop=true )
2026-02-03 17:19:28 (11748): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-03 17:19:28 (11748): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-03 17:19:28 (11748): Guest Log: 2.6.3.0 1599 0 30140 155837 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-03 17:19:29 (11748): Guest Log: copied the webapp to /var/www
2026-02-03 17:19:30 (11748): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-03 17:19:30 (11748): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-03 17:19:30 (11748): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-03 17:19:30 (11748): Guest Log:  *** Starting ATLAS job. (PandaID=6986150758 taskID=48317931) ***
2026-02-03 19:03:03 (11748): Status Report: Elapsed Time: '6000.602476'
2026-02-03 19:03:03 (11748): Status Report: CPU Time: '22208.921875'
2026-02-03 20:49:57 (11748): Status Report: Elapsed Time: '12001.041267'
2026-02-03 20:49:58 (11748): Status Report: CPU Time: '47704.390625'
2026-02-03 22:32:48 (11748): Status Report: Elapsed Time: '18001.405413'
2026-02-03 22:32:49 (11748): Status Report: CPU Time: '72200.828125'
2026-02-03 23:59:00 (11748): Guest Log:  *** Job finished ***
2026-02-03 23:59:00 (11748): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:35,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:35,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:51,235 | INFO     | [monitor] cgroup control has ended
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:52,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140589343999808)>', '<ExcThread(monitor, started 140588766717696)>']
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:53,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:53,423 | INFO     | [monitor] control thread has ended
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:57,970 | INFO     | all workflow threads have been joined
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:57,971 | INFO     | end of generic workflow (traces error code: 0)
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:57,971 | INFO     | traces error code: 0
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:57,971 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:58,121 [wrapper] ==== pilot stdout END ====
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:58,128 [wrapper] ==== wrapper stdout RESUME ====
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:58,136 [wrapper] pilotpid: 5999
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:58,143 [wrapper] Pilot exit status: 0
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:58,195 [wrapper] pandaids: 6986150758
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:58,247 [wrapper] cleanup supervisor_pilot 31082 6000
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:58,261 [wrapper] Test setup, not cleaning
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:58,268 [wrapper] apfmon messages muted
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:58,276 [wrapper] ==== wrapper stdout END ====
2026-02-03 23:59:00 (11748): Guest Log: 2026-02-03 22:58:58,284 [wrapper] ==== wrapper stderr END ====
2026-02-03 23:59:00 (11748): Guest Log:  *** Error codes and diagnostics ***
2026-02-03 23:59:00 (11748): Guest Log:     "exeErrorCode": 0,
2026-02-03 23:59:00 (11748): Guest Log:     "exeErrorDiag": "",
2026-02-03 23:59:00 (11748): Guest Log:     "pilotErrorCode": 0,
2026-02-03 23:59:00 (11748): Guest Log:     "pilotErrorDiag": "",
2026-02-03 23:59:00 (11748): Guest Log:  *** Listing of results directory ***
2026-02-03 23:59:00 (11748): Guest Log: total 198880
2026-02-03 23:59:00 (11748): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 28 17:07 runpilot2-wrapper.sh
2026-02-03 23:59:00 (11748): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 28 17:08 queuedata.json
2026-02-03 23:59:00 (11748): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 28 17:08 pilot3.tar.gz
2026-02-03 23:59:00 (11748): Guest Log: -rwxr-xr-x. 1 atlas atlas      8808 Feb  3 16:19 init_data.xml
2026-02-03 23:59:00 (11748): Guest Log: -rwxr-xr-x. 1 atlas atlas    597757 Feb  3 16:19 input.tar.gz
2026-02-03 23:59:00 (11748): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  3 16:19 start_atlas.sh
2026-02-03 23:59:00 (11748): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  3 16:19 EVNT.48317929._000048.pool.root.1 -> /data/./ATLAS.root_0
2026-02-03 23:59:00 (11748): Guest Log: -rw-r--r--. 1 atlas atlas      2508 Feb  3 16:19 pandaJob.out
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas   1009266 Feb  3 16:20 agis_schedconf.cvmfs.json
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas       426 Feb  3 16:20 workernode_map.json
2026-02-03 23:59:00 (11748): Guest Log: drwx------. 5 atlas atlas      4096 Feb  3 16:20 pilot3
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas 192138986 Feb  3 22:57 HITS.48317931._005190.pool.root.1
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas      1028 Feb  3 22:57 memory_monitor_summary.json
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  3 22:57 agis_ddmendpoints.agis.ALL.json
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas    528754 Feb  3 22:57 log.48317931._005190.job.log.tgz.1
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas        95 Feb  3 22:58 pilot_heartbeat.json
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas      6359 Feb  3 22:58 heartbeat.json
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas      4801 Feb  3 22:58 pilotlog.txt
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas   3289092 Feb  3 22:58 log.48317931._005190.job.log.1
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas       357 Feb  3 22:58 output.list
2026-02-03 23:59:00 (11748): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  3 22:58 runtime_log
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas   3840000 Feb  3 22:58 result.tar.gz
2026-02-03 23:59:00 (11748): Guest Log: -rw-r--r--. 1 atlas atlas      8770 Feb  3 22:58 runtime_log.err
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas       664 Feb  3 22:58 oiLNDm4BO58n9Rq4apOajLDm4fhM0noT9bVooX4SDmIfGKDmXTmrCo.diag
2026-02-03 23:59:00 (11748): Guest Log: Looking for outputfile HITS.48317931._005190.pool.root.1
2026-02-03 23:59:00 (11748): Guest Log: HITS file was successfully produced
2026-02-03 23:59:00 (11748): Guest Log: -rw-------. 1 atlas atlas 192138986 Feb  3 22:57 /home/atlas/RunAtlas/HITS.48317931._005190.pool.root.1
2026-02-03 23:59:01 (11748): Guest Log: Successfully finished the ATLAS job!
2026-02-03 23:59:01 (11748): Guest Log: Copying the results back to the shared directory!
2026-02-03 23:59:01 (11748): Guest Log:  *** Contents of shared directory: ***
2026-02-03 23:59:01 (11748): Guest Log: total 675988
2026-02-03 23:59:01 (11748): Guest Log: -rwxrwxrwx. 1 root root 495601296 Feb  3 16:18 ATLAS.root_0
2026-02-03 23:59:01 (11748): Guest Log: -rwxrwxrwx. 1 root root 192138986 Feb  3 22:59 HITS.pool.root.1
2026-02-03 23:59:01 (11748): Guest Log: -rwxrwxrwx. 1 root root      8808 Feb  3 16:18 init_data.xml
2026-02-03 23:59:01 (11748): Guest Log: -rwxrwxrwx. 1 root root    597757 Jan 28 21:43 input.tar.gz
2026-02-03 23:59:01 (11748): Guest Log: -rwxrwxrwx. 1 root root   3840000 Feb  3 22:59 result.tar.gz
2026-02-03 23:59:01 (11748): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 28 21:43 start_atlas.sh
2026-02-03 23:59:01 (11748): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-03 23:59:01 (11748): VM Completion File Detected.
2026-02-03 23:59:01 (11748): Powering off VM.
2026-02-03 23:59:03 (11748): Successfully stopped VM.
2026-02-03 23:59:03 (11748): Deregistering VM. (boinc_d1bf4c1436393c0e, slot#1)
2026-02-03 23:59:03 (11748): Removing network bandwidth throttle group from VM.
2026-02-03 23:59:03 (11748): Removing VM from VirtualBox.
2026-02-03 23:59:08 (11748): called boinc_finish(0)

</stderr_txt>
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