Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:24:31 (1226910): wrapper (7.7.26015): starting
22:24:31 (1226910): wrapper: running run_atlas (--nthreads 12)
[2026-01-28 22:24:31] Arguments: --nthreads 12
[2026-01-28 22:24:31] Threads: 12
[2026-01-28 22:24:31] Checking for CVMFS
[2026-01-28 22:24:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 22:24:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 22:24:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 22:24:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 22:24:31] 2.13.3.0 1151027 15 47792 155626 1 188 29827498 46080000 4617 130560 0 194224 99.988 3069 23075 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-28 22:24:31] CVMFS is ok
[2026-01-28 22:24:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 22:24:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 22:24:31] Further information can be found at the LHC@home message board.
[2026-01-28 22:24:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 22:24:31] Checking for apptainer binary...
[2026-01-28 22:24:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 22:24:31] Running /usr/bin/apptainer --version
[2026-01-28 22:24:31] apptainer version 1.4.5-2.el9
[2026-01-28 22:24:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 22:24:32] mff2101.farm.particle.cz
[2026-01-28 22:24:32] apptainer works
[2026-01-28 22:24:32] Set ATHENA_PROC_NUMBER=12
[2026-01-28 22:24:32] Set ATHENA_CORE_NUMBER=12
[2026-01-28 22:24:32] Starting ATLAS job with PandaID=6985859163
[2026-01-28 22:24:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 23:19:01]  *** The last 200 lines of the pilot log: ***
[2026-01-28 23:19:01]  guid=334b49e7-f723-403b-a44b-452a152dc380
[2026-01-28 23:19:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-28 23:19:01]  is_altstaged=None
[2026-01-28 23:19:01]  is_tar=False
[2026-01-28 23:19:01]  lfn=log.48317872._007542.job.log.tgz.1
[2026-01-28 23:19:01]  mtime=0
[2026-01-28 23:19:01]  protocol_id=None
[2026-01-28 23:19:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-28 23:19:01]  replicas=None
[2026-01-28 23:19:01]  scope=mc23_13p6TeV
[2026-01-28 23:19:01]  status=None
[2026-01-28 23:19:01]  status_code=0
[2026-01-28 23:19:01]  storage_token=
[2026-01-28 23:19:01]  surl=/scratch/.boinc/slots/5/PanDA_Pilot-6985859163/log.48317872._007542.job.log.tgz.1
[2026-01-28 23:19:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/e7/log.48317872._007542.job.log.tgz.1
[2026-01-28 23:19:01]  workdir=None
[2026-01-28 23:19:01] ]
[2026-01-28 23:19:01] 2026-01-28 22:18:25,340 | INFO     | transferring file log.48317872._007542.job.log.tgz.1 from /scratch/.boinc/slots/5/PanDA_Pilot-6985859163/log.48317872._007542.job.log.tgz.1 to /scratch/.boinc/slot
[2026-01-28 23:19:01] 2026-01-28 22:18:25,340 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/5/PanDA_Pilot-6985859163/log.48317872._007542.job.log.tgz.1 /scratch/.boinc/slots/5/log.48317872._007542.j
[2026-01-28 23:19:01] 2026-01-28 22:18:25,363 | INFO     | adding to output.list: log.48317872._007542.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/e7/log.48317872._007542.job.log.tg
[2026-01-28 23:19:01] 2026-01-28 22:18:25,364 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-28 23:19:01] 2026-01-28 22:18:25,364 | INFO     | summary of transferred files:
[2026-01-28 23:19:01] 2026-01-28 22:18:25,364 | INFO     |  -- lfn=log.48317872._007542.job.log.tgz.1, status_code=0, status=transferred
[2026-01-28 23:19:01] 2026-01-28 22:18:25,365 | INFO     | stage-out finished correctly
[2026-01-28 23:19:01] 2026-01-28 22:18:25,454 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-28 23:19:01] 2026-01-28 22:18:26,712 | INFO     | time since job start (3216s) is within the limit (349056.0s)
[2026-01-28 23:19:01] 2026-01-28 22:18:26,918 | INFO     | job 6985859163 has state=finished
[2026-01-28 23:19:01] 2026-01-28 22:18:26,918 | INFO     | preparing for final server update for job 6985859163 in state='finished'
[2026-01-28 23:19:01] 2026-01-28 22:18:26,918 | INFO     | reading metadata from: /scratch/.boinc/slots/5/PanDA_Pilot-6985859163/jobReport.json
[2026-01-28 23:19:01] 2026-01-28 22:18:26,921 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/5/workernode_map.json
[2026-01-28 23:19:01] 2026-01-28 22:18:26,921 | INFO     | this job has now completed (state=finished)
[2026-01-28 23:19:01] 2026-01-28 22:18:26,921 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 23:19:01] 2026-01-28 22:18:26,921 | INFO     | log transfer has been attempted: DONE
[2026-01-28 23:19:01] 2026-01-28 22:18:26,921 | INFO     | job 6985859163 has finished - writing final server update
[2026-01-28 23:19:01] 2026-01-28 22:18:26,926 | INFO     | total number of processed events: 400 (read)
[2026-01-28 23:19:01] 2026-01-28 22:18:26,943 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6985859163/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 23:19:01] 2026-01-28 22:18:26,943 | INFO     | extracted standard info from prmon json
[2026-01-28 23:19:01] 2026-01-28 22:18:26,943 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 23:19:01] 2026-01-28 22:18:26,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 23:19:01] 2026-01-28 22:18:26,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 23:19:01] 2026-01-28 22:18:26,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 23:19:01] 2026-01-28 22:18:26,945 | INFO     | fitting pss+swap vs Time
[2026-01-28 23:19:01] 2026-01-28 22:18:26,945 | INFO     | sum of square deviations: 30168007.5
[2026-01-28 23:19:01] 2026-01-28 22:18:26,945 | INFO     | sum of deviations: 495602124.99999994
[2026-01-28 23:19:01] 2026-01-28 22:18:26,945 | INFO     | mean x: 1769637191.5
[2026-01-28 23:19:01] 2026-01-28 22:18:26,945 | INFO     | mean y: 2735310.347826087
[2026-01-28 23:19:01] 2026-01-28 22:18:26,945 | INFO     | intersect: -29068987526.714973
[2026-01-28 23:19:01] 2026-01-28 22:18:26,946 | INFO     | chi2: 0.0005065934597430522
[2026-01-28 23:19:01] 2026-01-28 22:18:26,946 | INFO     | current memory leak: 16.43 B/s (using 46 data points, chi2=0.00)
[2026-01-28 23:19:01] 2026-01-28 22:18:26,946 | INFO     | could have reported an average CPU frequency of 2753 MHz (5 samples)
[2026-01-28 23:19:01] 2026-01-28 22:18:26,946 | INFO     | ..............................
[2026-01-28 23:19:01] 2026-01-28 22:18:26,946 | INFO     | . Timing measurements:
[2026-01-28 23:19:01] 2026-01-28 22:18:26,946 | INFO     | . get job = 0 s
[2026-01-28 23:19:01] 2026-01-28 22:18:26,947 | INFO     | . initial setup = 8 s
[2026-01-28 23:19:01] 2026-01-28 22:18:26,947 | INFO     | . payload setup = 7 s
[2026-01-28 23:19:01] 2026-01-28 22:18:26,947 | INFO     | . stage-in = 5 s
[2026-01-28 23:19:01] 2026-01-28 22:18:26,947 | INFO     | . payload execution = 3192 s
[2026-01-28 23:19:01] 2026-01-28 22:18:26,947 | INFO     | . stage-out = 0 s
[2026-01-28 23:19:01] 2026-01-28 22:18:26,948 | INFO     | . log creation = 0 s
[2026-01-28 23:19:01] 2026-01-28 22:18:26,948 | INFO     | ..............................
[2026-01-28 23:19:01] 2026-01-28 22:18:27,034 | INFO     | 
[2026-01-28 23:19:01] 2026-01-28 22:18:27,034 | INFO     | job summary report
[2026-01-28 23:19:01] 2026-01-28 22:18:27,034 | INFO     | --------------------------------------------------
[2026-01-28 23:19:01] 2026-01-28 22:18:27,034 | INFO     | PanDA job id: 6985859163
[2026-01-28 23:19:01] 2026-01-28 22:18:27,034 | INFO     | task id: 48317872
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | errors: (none)
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | pilot state: finished 
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | transexitcode: 0
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | exeerrorcode: 0
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | exeerrordiag: 
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | exitcode: 0
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | exitmsg: OK
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | cpuconsumptiontime: 33661 s
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | nevents: 400
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | neventsw: 0
[2026-01-28 23:19:01] 2026-01-28 22:18:27,035 | INFO     | pid: 1237142
[2026-01-28 23:19:01] 2026-01-28 22:18:27,036 | INFO     | pgrp: 1237142
[2026-01-28 23:19:01] 2026-01-28 22:18:27,036 | INFO     | corecount: 12
[2026-01-28 23:19:01] 2026-01-28 22:18:27,036 | INFO     | event service: False
[2026-01-28 23:19:01] 2026-01-28 22:18:27,036 | INFO     | sizes: {0: 2283971, 6: 2284233, 11: 2284261, 3203: 2309790, 3204: 2318846, 3205: 2319016}
[2026-01-28 23:19:01] 2026-01-28 22:18:27,036 | INFO     | --------------------------------------------------
[2026-01-28 23:19:01] 2026-01-28 22:18:27,036 | INFO     | 
[2026-01-28 23:19:01] 2026-01-28 22:18:27,036 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2026-01-28 23:19:01] 2026-01-28 22:18:27,059 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,060 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,060 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,060 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,061 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 23:19:01] 2026-01-28 22:18:27,061 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,061 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 23:19:01] 2026-01-28 22:18:27,061 | INFO     | job 6985859163 has completed (purged errors)
[2026-01-28 23:19:01] 2026-01-28 22:18:27,061 | INFO     | overall cleanup function is called
[2026-01-28 23:19:01] 2026-01-28 22:18:28,071 | INFO     | --- collectZombieJob: --- 10, [1237142]
[2026-01-28 23:19:01] 2026-01-28 22:18:28,072 | INFO     | zombie collector waiting for pid 1237142
[2026-01-28 23:19:01] 2026-01-28 22:18:28,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 23:19:01] 2026-01-28 22:18:28,072 | INFO     | collected zombie processes
[2026-01-28 23:19:01] 2026-01-28 22:18:28,072 | INFO     | will attempt to kill all subprocesses of pid=1237142
[2026-01-28 23:19:01] 2026-01-28 22:18:28,414 | INFO     | process IDs to be killed: [1237142] (in reverse order)
[2026-01-28 23:19:01] 2026-01-28 22:18:28,530 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 23:19:01] 2026-01-28 22:18:28,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 23:19:01] 2026-01-28 22:18:28,542 | INFO     | did not find any defunct processes belonging to 1237142
[2026-01-28 23:19:01] 2026-01-28 22:18:28,552 | INFO     | did not find any defunct processes belonging to 1237142
[2026-01-28 23:19:01] 2026-01-28 22:18:28,552 | INFO     | ready for new job
[2026-01-28 23:19:01] 2026-01-28 22:18:28,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 23:19:01] 2026-01-28 22:18:28,567 | INFO     | **************************************
[2026-01-28 23:19:01] 2026-01-28 22:18:28,567 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 23:19:01] 2026-01-28 22:18:28,567 | INFO     | **************************************
[2026-01-28 23:19:01] 2026-01-28 22:18:28,567 | INFO     | 
[2026-01-28 23:19:01] 2026-01-28 22:18:28,574 | INFO     | architecture information:
[2026-01-28 23:19:01] 2026-01-28 22:18:28,574 | INFO     | executing command: cat /etc/os-release
[2026-01-28 23:19:01] 2026-01-28 22:18:28,597 | INFO     | cat /etc/os-release:
[2026-01-28 23:19:01] NAME="CentOS Linux"
[2026-01-28 23:19:01] VERSION="7 (Core)"
[2026-01-28 23:19:01] ID="centos"
[2026-01-28 23:19:01] ID_LIKE="rhel fedora"
[2026-01-28 23:19:01] VERSION_ID="7"
[2026-01-28 23:19:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 23:19:01] ANSI_COLOR="0;31"
[2026-01-28 23:19:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 23:19:01] HOME_URL="https://www.centos.org/"
[2026-01-28 23:19:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 23:19:01] 
[2026-01-28 23:19:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 23:19:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 23:19:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 23:19:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 23:19:01] 
[2026-01-28 23:19:01] 2026-01-28 22:18:28,598 | INFO     | **************************************
[2026-01-28 23:19:01] 2026-01-28 22:18:29,101 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2026-01-28 23:19:01] 2026-01-28 22:18:29,122 | INFO     | sufficient remaining disk space (1668075749376 B)
[2026-01-28 23:19:01] 2026-01-28 22:18:29,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 23:19:01] 2026-01-28 22:18:29,122 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 23:19:01] 2026-01-28 22:18:29,122 | INFO     | update_server=False
[2026-01-28 23:19:01] 2026-01-28 22:18:29,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 23:19:01] 2026-01-28 22:18:29,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 23:19:01] 2026-01-28 22:18:29,466 | INFO     | all data control threads have been joined
[2026-01-28 23:19:01] 2026-01-28 22:18:29,610 | INFO     | all payload control threads have been joined
[2026-01-28 23:19:01] 2026-01-28 22:18:29,779 | WARNING  | process 1237142 can no longer be monitored (due to stat problems) - aborting
[2026-01-28 23:19:01] 2026-01-28 22:18:30,059 | INFO     | using path: /scratch/.boinc/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 23:19:01] 2026-01-28 22:18:30,129 | INFO     | [job] retrieve thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:30,236 | INFO     | [data] copytool_in thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:30,423 | INFO     | number of running child processes to parent process 1237142: 1
[2026-01-28 23:19:01] 2026-01-28 22:18:30,424 | INFO     | maximum number of monitored processes: 6
[2026-01-28 23:19:01] 2026-01-28 22:18:30,424 | INFO     | aborting job monitoring since job object (job id=6985859163) has expired
[2026-01-28 23:19:01] 2026-01-28 22:18:30,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 23:19:01] 2026-01-28 22:18:30,424 | INFO     | will abort loop
[2026-01-28 23:19:01] 2026-01-28 22:18:30,436 | INFO     | [payload] validate_post thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:30,460 | INFO     | all job control threads have been joined
[2026-01-28 23:19:01] 2026-01-28 22:18:30,472 | INFO     | [data] control thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:30,554 | INFO     | [job] validate thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:30,615 | INFO     | [payload] control thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:30,682 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:30,740 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:30,831 | INFO     | [payload] failed_post thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:30,891 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:31,129 | INFO     | [data] copytool_out thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:31,430 | INFO     | [job] job monitor thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:31,465 | INFO     | [job] control thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:31,549 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 23:19:01] 2026-01-28 22:18:31,551 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:32,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 23:19:01] 2026-01-28 22:18:33,057 | INFO     | [job] queue monitor thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:35,555 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 23:19:01] 2026-01-28 22:18:55,027 | INFO     | [monitor] cgroup control has ended
[2026-01-28 23:19:01] 2026-01-28 22:18:55,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139657532454720)>', '<ExcThread(monitor, started 139657153074944)>']
[2026-01-28 23:19:01] 2026-01-28 22:19:00,248 | INFO     | PID=1231007 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 23:19:01] 2026-01-28 22:19:00,248 | INFO     | .. there are 8 such processes running
[2026-01-28 23:19:01] 2026-01-28 22:19:00,249 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 23:19:01] 2026-01-28 22:19:00,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 23:19:01] 2026-01-28 22:19:00,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 23:19:01] 2026-01-28 22:19:00,249 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 23:19:01] 2026-01-28 22:19:00,249 | INFO     | [monitor] control thread has ended
[2026-01-28 23:19:01] 2026-01-28 22:19:01,016 | INFO     | all workflow threads have been joined
[2026-01-28 23:19:01] 2026-01-28 22:19:01,017 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 23:19:01] 2026-01-28 22:19:01,017 | INFO     | traces error code: 0
[2026-01-28 23:19:01] 2026-01-28 22:19:01,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 23:19:01] 2026-01-28 22:19:01,150 [wrapper] ==== pilot stdout END ====
[2026-01-28 23:19:01] 2026-01-28 22:19:01,154 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 23:19:01] 2026-01-28 22:19:01,157 [wrapper] pilotpid: 1231007
[2026-01-28 23:19:01] 2026-01-28 22:19:01,161 [wrapper] Pilot exit status: 0
[2026-01-28 23:19:01] 2026-01-28 22:19:01,175 [wrapper] pandaids: 6985859163
[2026-01-28 23:19:01] 2026-01-28 22:19:01,260 [wrapper] cleanup supervisor_pilot 1338075 1231008
[2026-01-28 23:19:01] 2026-01-28 22:19:01,264 [wrapper] Test setup, not cleaning
[2026-01-28 23:19:01] 2026-01-28 22:19:01,269 [wrapper] apfmon messages muted
[2026-01-28 23:19:01] 2026-01-28 22:19:01,273 [wrapper] ==== wrapper stdout END ====
[2026-01-28 23:19:01] 2026-01-28 22:19:01,276 [wrapper] ==== wrapper stderr END ====
[2026-01-28 23:19:01]  *** Error codes and diagnostics ***
[2026-01-28 23:19:01]     "exeErrorCode": 0,
[2026-01-28 23:19:01]     "exeErrorDiag": "",
[2026-01-28 23:19:01]     "pilotErrorCode": 0,
[2026-01-28 23:19:01]     "pilotErrorDiag": "",
[2026-01-28 23:19:01]  *** Listing of results directory ***
[2026-01-28 23:19:01] total 663772
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc    584422 Jan 28 16:24 pilot3.tar.gz
[2026-01-28 23:19:01] -rwx------ 1 boinc boinc     36322 Jan 28 16:24 runpilot2-wrapper.sh
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc      5111 Jan 28 16:24 queuedata.json
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc       100 Jan 28 22:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 23:19:01] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 22:24 run_atlas
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc       105 Jan 28 22:24 job.xml
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc      6676 Jan 28 22:24 init_data.xml
[2026-01-28 23:19:01] -rw-r--r-- 2 boinc boinc 496343221 Jan 28 22:24 EVNT.48317869._000151.pool.root.1
[2026-01-28 23:19:01] -rw-r--r-- 2 boinc boinc     15845 Jan 28 22:24 start_atlas.sh
[2026-01-28 23:19:01] drwxrwx--x 2 boinc boinc      4096 Jan 28 22:24 shared
[2026-01-28 23:19:01] -rw-r--r-- 2 boinc boinc    597759 Jan 28 22:24 input.tar.gz
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc         0 Jan 28 22:24 boinc_lockfile
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc      2514 Jan 28 22:24 pandaJob.out
[2026-01-28 23:19:01] -rw------- 1 boinc boinc   1005755 Jan 28 22:24 agis_schedconf.cvmfs.json
[2026-01-28 23:19:01] -rw------- 1 boinc boinc   1516246 Jan 28 22:24 agis_ddmendpoints.agis.ALL.json
[2026-01-28 23:19:01] -rw------- 1 boinc boinc       436 Jan 28 22:24 workernode_map.json
[2026-01-28 23:19:01] drwx------ 5 boinc boinc      4096 Jan 28 22:24 pilot3
[2026-01-28 23:19:01] -rw------- 1 boinc boinc 177709363 Jan 28 23:17 HITS.48317872._007542.pool.root.1
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc       531 Jan 28 23:17 boinc_task_state.xml
[2026-01-28 23:19:01] -rw------- 1 boinc boinc      1026 Jan 28 23:18 memory_monitor_summary.json
[2026-01-28 23:19:01] -rw------- 1 boinc boinc    366413 Jan 28 23:18 log.48317872._007542.job.log.tgz.1
[2026-01-28 23:19:01] -rw------- 1 boinc boinc      6340 Jan 28 23:18 heartbeat.json
[2026-01-28 23:19:01] -rw------- 1 boinc boinc        95 Jan 28 23:19 pilot_heartbeat.json
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc      8192 Jan 28 23:19 boinc_mmap_file
[2026-01-28 23:19:01] -rw------- 1 boinc boinc      5344 Jan 28 23:19 pilotlog.txt
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc        27 Jan 28 23:19 wrapper_checkpoint.txt
[2026-01-28 23:19:01] -rw------- 1 boinc boinc    485433 Jan 28 23:19 log.48317872._007542.job.log.1
[2026-01-28 23:19:01] -rw------- 1 boinc boinc       357 Jan 28 23:19 output.list
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc       620 Jan 28 23:19 runtime_log
[2026-01-28 23:19:01] -rw------- 1 boinc boinc    870400 Jan 28 23:19 result.tar.gz
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc      8879 Jan 28 23:19 runtime_log.err
[2026-01-28 23:19:01] -rw------- 1 boinc boinc       661 Jan 28 23:19 ltaNDmDaM58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSPGKDmgkUxkm.diag
[2026-01-28 23:19:01] -rw-r--r-- 1 boinc boinc     21411 Jan 28 23:19 stderr.txt
[2026-01-28 23:19:01] HITS file was successfully produced:
[2026-01-28 23:19:01] -rw------- 1 boinc boinc 177709363 Jan 28 23:17 shared/HITS.pool.root.1
[2026-01-28 23:19:01]  *** Contents of shared directory: ***
[2026-01-28 23:19:01] total 659720
[2026-01-28 23:19:01] -rw-r--r-- 2 boinc boinc 496343221 Jan 28 22:24 ATLAS.root_0
[2026-01-28 23:19:01] -rw-r--r-- 2 boinc boinc     15845 Jan 28 22:24 start_atlas.sh
[2026-01-28 23:19:01] -rw-r--r-- 2 boinc boinc    597759 Jan 28 22:24 input.tar.gz
[2026-01-28 23:19:01] -rw------- 1 boinc boinc 177709363 Jan 28 23:17 HITS.pool.root.1
[2026-01-28 23:19:01] -rw------- 1 boinc boinc    870400 Jan 28 23:19 result.tar.gz
23:19:03 (1226910): run_atlas exited; CPU time 33732.936496
23:19:03 (1226910): called boinc_finish(0)

</stderr_txt>
]]>

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