Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:55:39 (336003): wrapper (7.7.26015): starting
04:55:39 (336003): wrapper: running run_atlas (--nthreads 3)
[2026-01-29 04:55:39] Arguments: --nthreads 3
[2026-01-29 04:55:39] Threads: 3
[2026-01-29 04:55:39] Checking for CVMFS
[2026-01-29 04:55:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 04:55:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 04:55:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 04:55:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 04:55:40] 2.9.2.0 138496 803 57956 155626 0 188 17977015 36864001 0 130560 0 321670 99.993 7134 4781 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-29 04:55:40] CVMFS is ok
[2026-01-29 04:55:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 04:55:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 04:55:40] Further information can be found at the LHC@home message board.
[2026-01-29 04:55:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 04:55:40] Checking for apptainer binary...
[2026-01-29 04:55:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 04:55:40] Running /usr/bin/apptainer --version
[2026-01-29 04:55:40] apptainer version 1.4.1-1.1
[2026-01-29 04:55:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 04:55:40] atlasA221b
[2026-01-29 04:55:40] apptainer works
[2026-01-29 04:55:40] Set ATHENA_PROC_NUMBER=3
[2026-01-29 04:55:40] Set ATHENA_CORE_NUMBER=3
[2026-01-29 04:55:40] Starting ATLAS job with PandaID=6986149358
[2026-01-29 04:55:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 06:35:08]  *** The last 200 lines of the pilot log: ***
[2026-01-29 06:35:08] 2026-01-29 05:34:15,661 | INFO     | executing command: cat /etc/os-release
[2026-01-29 06:35:08] 2026-01-29 05:34:15,671 | INFO     | cat /etc/os-release:
[2026-01-29 06:35:08] NAME="CentOS Linux"
[2026-01-29 06:35:08] VERSION="7 (Core)"
[2026-01-29 06:35:08] ID="centos"
[2026-01-29 06:35:08] ID_LIKE="rhel fedora"
[2026-01-29 06:35:08] VERSION_ID="7"
[2026-01-29 06:35:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 06:35:08] ANSI_COLOR="0;31"
[2026-01-29 06:35:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 06:35:08] HOME_URL="https://www.centos.org/"
[2026-01-29 06:35:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 06:35:08] 
[2026-01-29 06:35:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 06:35:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 06:35:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 06:35:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 06:35:08] 
[2026-01-29 06:35:08] 2026-01-29 05:34:15,671 | INFO     | **************************************
[2026-01-29 06:35:08] 2026-01-29 05:34:16,174 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-29 06:35:08] 2026-01-29 05:34:16,182 | INFO     | sufficient remaining disk space (339810975744 B)
[2026-01-29 06:35:08] 2026-01-29 05:34:16,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 06:35:08] 2026-01-29 05:34:16,183 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 06:35:08] 2026-01-29 05:34:16,183 | INFO     | update_server=False
[2026-01-29 06:35:08] 2026-01-29 05:34:16,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 06:35:08] 2026-01-29 05:34:16,183 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 06:35:08] 2026-01-29 05:34:16,553 | INFO     | all data control threads have been joined
[2026-01-29 06:35:08] 2026-01-29 05:34:16,639 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-29 06:35:08] 2026-01-29 05:34:16,639 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-29 06:35:08] 2026-01-29 05:34:16,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 06:35:08] 2026-01-29 05:34:16,639 | INFO     | will abort loop
[2026-01-29 06:35:08] 2026-01-29 05:34:16,810 | INFO     | all payload control threads have been joined
[2026-01-29 06:35:08] 2026-01-29 05:34:17,152 | INFO     | all job control threads have been joined
[2026-01-29 06:35:08] 2026-01-29 05:34:17,188 | INFO     | [job] queue monitor thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:17,189 | INFO     | [job] retrieve thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:17,508 | INFO     | [payload] validate_post thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:17,559 | INFO     | [data] control thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:17,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 06:35:08] 2026-01-29 05:34:17,641 | INFO     | [job] job monitor thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:17,815 | INFO     | [payload] control thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:17,819 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:17,891 | INFO     | [job] validate thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:18,013 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:18,059 | INFO     | [data] copytool_in thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:18,158 | INFO     | [job] control thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:18,202 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:18,557 | INFO     | [payload] failed_post thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:19,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 06:35:08] 2026-01-29 05:34:19,642 | INFO     | [data] copytool_out thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:23,120 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:27,055 | INFO     | job.realtimelogging is not enabled
[2026-01-29 06:35:08] 2026-01-29 05:34:28,061 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 06:35:08] 2026-01-29 05:34:47,108 | INFO     | PID=340060 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-29 06:35:08] 2026-01-29 05:34:47,108 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 06:35:08] 2026-01-29 05:34:47,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 06:35:08] 2026-01-29 05:34:47,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 06:35:08] 2026-01-29 05:35:01,442 | INFO     | [monitor] cgroup control has ended
[2026-01-29 06:35:08] 2026-01-29 05:35:03,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731097605952)>', '<ExcThread(monitor, started 139730234627840)>']
[2026-01-29 06:35:08] 2026-01-29 05:35:04,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 06:35:08] 2026-01-29 05:35:04,186 | INFO     | [monitor] control thread has ended
[2026-01-29 06:35:08] 2026-01-29 05:35:08,426 | INFO     | all workflow threads have been joined
[2026-01-29 06:35:08] 2026-01-29 05:35:08,427 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 06:35:08] 2026-01-29 05:35:08,427 | INFO     | traces error code: 0
[2026-01-29 06:35:08] 2026-01-29 05:35:08,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 06:35:08] 2026-01-29 05:35:08,477 [wrapper] ==== pilot stdout END ====
[2026-01-29 06:35:08] 2026-01-29 05:35:08,479 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 06:35:08] 2026-01-29 05:35:08,482 [wrapper] pilotpid: 340060
[2026-01-29 06:35:08] 2026-01-29 05:35:08,484 [wrapper] Pilot exit status: 0
[2026-01-29 06:35:08] 2026-01-29 05:35:08,490 [wrapper] pandaids: 6986149358
[2026-01-29 06:35:08] 2026-01-29 05:35:08,508 [wrapper] cleanup supervisor_pilot  359530 340061
[2026-01-29 06:35:08] 2026-01-29 05:35:08,510 [wrapper] Test setup, not cleaning
[2026-01-29 06:35:08] 2026-01-29 05:35:08,512 [wrapper] apfmon messages muted
[2026-01-29 06:35:08] 2026-01-29 05:35:08,514 [wrapper] ==== wrapper stdout END ====
[2026-01-29 06:35:08] 2026-01-29 05:35:08,517 [wrapper] ==== wrapper stderr END ====
[2026-01-29 06:35:08]  *** Error codes and diagnostics ***
[2026-01-29 06:35:08]     "exeErrorCode": 0,
[2026-01-29 06:35:08]     "exeErrorDiag": "",
[2026-01-29 06:35:08]     "pilotErrorCode": 0,
[2026-01-29 06:35:08]     "pilotErrorDiag": "",
[2026-01-29 06:35:08]  *** Listing of results directory ***
[2026-01-29 06:35:08] total 667324
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc    584422 Jan 28 18:04 pilot3.tar.gz
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc      5111 Jan 28 18:04 queuedata.json
[2026-01-29 06:35:08] -rwx------ 1 boinc boinc     36322 Jan 28 18:04 runpilot2-wrapper.sh
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc       100 Jan 29 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 06:35:08] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 04:55 run_atlas
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc       105 Jan 29 04:55 job.xml
[2026-01-29 06:35:08] -rw-r--r-- 2 boinc boinc 494518992 Jan 29 04:55 EVNT.48317929._000036.pool.root.1
[2026-01-29 06:35:08] -rw-r--r-- 2 boinc boinc    597760 Jan 29 04:55 input.tar.gz
[2026-01-29 06:35:08] -rw-r--r-- 2 boinc boinc     15845 Jan 29 04:55 start_atlas.sh
[2026-01-29 06:35:08] drwxrwx--x 2 boinc boinc      4096 Jan 29 04:55 shared
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc         0 Jan 29 04:55 boinc_setup_complete
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc      6199 Jan 29 04:55 init_data.xml
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc         0 Jan 29 04:55 boinc_lockfile
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc      2508 Jan 29 04:55 pandaJob.out
[2026-01-29 06:35:08] -rw------- 1 boinc boinc   1005755 Jan 29 04:55 agis_schedconf.cvmfs.json
[2026-01-29 06:35:08] -rw------- 1 boinc boinc   1516246 Jan 29 04:55 agis_ddmendpoints.agis.ALL.json
[2026-01-29 06:35:08] -rw------- 1 boinc boinc       430 Jan 29 04:55 workernode_map.json
[2026-01-29 06:35:08] drwx------ 5 boinc boinc      4096 Jan 29 04:55 pilot3
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc       530 Jan 29 06:33 boinc_task_state.xml
[2026-01-29 06:35:08] -rw------- 1 boinc boinc 182590417 Jan 29 06:33 HITS.48317931._004617.pool.root.1
[2026-01-29 06:35:08] -rw------- 1 boinc boinc      1030 Jan 29 06:34 memory_monitor_summary.json
[2026-01-29 06:35:08] -rw------- 1 boinc boinc    297747 Jan 29 06:34 log.48317931._004617.job.log.tgz.1
[2026-01-29 06:35:08] -rw------- 1 boinc boinc      6339 Jan 29 06:34 heartbeat.json
[2026-01-29 06:35:08] -rw------- 1 boinc boinc        95 Jan 29 06:34 pilot_heartbeat.json
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc        27 Jan 29 06:34 wrapper_checkpoint.txt
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc      8192 Jan 29 06:34 boinc_mmap_file
[2026-01-29 06:35:08] -rw------- 1 boinc boinc      5005 Jan 29 06:35 pilotlog.txt
[2026-01-29 06:35:08] -rw------- 1 boinc boinc    852932 Jan 29 06:35 log.48317931._004617.job.log.1
[2026-01-29 06:35:08] -rw------- 1 boinc boinc       357 Jan 29 06:35 output.list
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc       620 Jan 29 06:35 runtime_log
[2026-01-29 06:35:08] -rw------- 1 boinc boinc   1167360 Jan 29 06:35 result.tar.gz
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc      8916 Jan 29 06:35 runtime_log.err
[2026-01-29 06:35:08] -rw------- 1 boinc boinc       661 Jan 29 06:35 99vNDmA9N58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUcGKDmOIPE5m.diag
[2026-01-29 06:35:08] -rw-r--r-- 1 boinc boinc      9204 Jan 29 06:35 stderr.txt
[2026-01-29 06:35:08] HITS file was successfully produced:
[2026-01-29 06:35:08] -rw------- 1 boinc boinc 182590417 Jan 29 06:33 shared/HITS.pool.root.1
[2026-01-29 06:35:08]  *** Contents of shared directory: ***
[2026-01-29 06:35:08] total 662992
[2026-01-29 06:35:08] -rw-r--r-- 2 boinc boinc 494518992 Jan 29 04:55 ATLAS.root_0
[2026-01-29 06:35:08] -rw-r--r-- 2 boinc boinc    597760 Jan 29 04:55 input.tar.gz
[2026-01-29 06:35:08] -rw-r--r-- 2 boinc boinc     15845 Jan 29 04:55 start_atlas.sh
[2026-01-29 06:35:08] -rw------- 1 boinc boinc 182590417 Jan 29 06:33 HITS.pool.root.1
[2026-01-29 06:35:08] -rw------- 1 boinc boinc   1167360 Jan 29 06:35 result.tar.gz
06:35:10 (336003): run_atlas exited; CPU time 17013.411298
06:35:10 (336003): called boinc_finish(0)

</stderr_txt>
]]>

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