Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:09:58 (4165043): wrapper (7.7.26015): starting
02:09:58 (4165043): wrapper: running run_atlas (--nthreads 3)
[2026-01-29 02:09:58] Arguments: --nthreads 3
[2026-01-29 02:09:58] Threads: 3
[2026-01-29 02:09:58] Checking for CVMFS
[2026-01-29 02:09:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 02:09:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 02:09:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 02:09:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 02:09:59] 2.9.2.0 4027610 771 67676 155626 0 188 24423583 36864000 0 130560 0 359832 99.994 7098 4835 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-29 02:09:59] CVMFS is ok
[2026-01-29 02:09:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 02:09:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 02:09:59] Further information can be found at the LHC@home message board.
[2026-01-29 02:09:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 02:09:59] Checking for apptainer binary...
[2026-01-29 02:09:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 02:09:59] Running /usr/bin/apptainer --version
[2026-01-29 02:09:59] apptainer version 1.4.1-1.1
[2026-01-29 02:09:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 02:09:59] magicA246a
[2026-01-29 02:09:59] apptainer works
[2026-01-29 02:09:59] Set ATHENA_PROC_NUMBER=3
[2026-01-29 02:09:59] Set ATHENA_CORE_NUMBER=3
[2026-01-29 02:09:59] Starting ATLAS job with PandaID=6985858476
[2026-01-29 02:09:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 03:35:19]  *** The last 200 lines of the pilot log: ***
[2026-01-29 03:35:19] 2026-01-29 02:34:27,579 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 03:35:19] 2026-01-29 02:34:27,579 | INFO     | update_server=False
[2026-01-29 03:35:19] 2026-01-29 02:34:27,579 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 03:35:19] 2026-01-29 02:34:27,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 03:35:19] 2026-01-29 02:34:27,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 03:35:19] 2026-01-29 02:34:27,580 | INFO     | aborting loop
[2026-01-29 03:35:19] 2026-01-29 02:34:28,337 | INFO     | all data control threads have been joined
[2026-01-29 03:35:19] 2026-01-29 02:34:28,585 | INFO     | [job] retrieve thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:28,585 | INFO     | [job] job monitor thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:28,586 | INFO     | [job] queue monitor thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:28,613 | INFO     | all job control threads have been joined
[2026-01-29 03:35:19] 2026-01-29 02:34:28,644 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:28,654 | INFO     | all payload control threads have been joined
[2026-01-29 03:35:19] 2026-01-29 02:34:28,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 03:35:19] 2026-01-29 02:34:28,906 | INFO     | [payload] failed_post thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:29,245 | INFO     | [job] validate thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:29,342 | INFO     | [data] control thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:29,368 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:29,416 | INFO     | [payload] validate_post thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:29,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 03:35:19] 2026-01-29 02:34:29,454 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:29,515 | INFO     | [data] copytool_in thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:29,533 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:29,619 | INFO     | [job] control thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:29,660 | INFO     | [payload] control thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:30,819 | INFO     | [data] copytool_out thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:33,436 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 03:35:19] 2026-01-29 02:34:58,028 | INFO     | PID=4169100 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-29 03:35:19] 2026-01-29 02:34:58,028 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 03:35:19] 2026-01-29 02:34:58,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 03:35:19] 2026-01-29 02:34:58,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 03:35:19] 2026-01-29 02:35:14,698 | INFO     | [monitor] cgroup control has ended
[2026-01-29 03:35:19] 2026-01-29 02:35:14,763 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990509127488)>', '<ExcThread(monitor, started 139989870429952)>']
[2026-01-29 03:35:19] 2026-01-29 02:35:15,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 03:35:19] 2026-01-29 02:35:15,113 | INFO     | [monitor] control thread has ended
[2026-01-29 03:35:19] 2026-01-29 02:35:19,784 | INFO     | all workflow threads have been joined
[2026-01-29 03:35:19] 2026-01-29 02:35:19,784 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 03:35:19] 2026-01-29 02:35:19,785 | INFO     | traces error code: 0
[2026-01-29 03:35:19] 2026-01-29 02:35:19,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 03:35:19] 2026-01-29 02:35:19,836 [wrapper] ==== pilot stdout END ====
[2026-01-29 03:35:19] 2026-01-29 02:35:19,838 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 03:35:19] 2026-01-29 02:35:19,840 [wrapper] pilotpid: 4169100
[2026-01-29 03:35:19] 2026-01-29 02:35:19,843 [wrapper] Pilot exit status: 0
[2026-01-29 03:35:19] 2026-01-29 02:35:19,850 [wrapper] pandaids: 6985858476
[2026-01-29 03:35:19] 2026-01-29 02:35:19,870 [wrapper] cleanup supervisor_pilot 4179789 4169101
[2026-01-29 03:35:19] 2026-01-29 02:35:19,873 [wrapper] Test setup, not cleaning
[2026-01-29 03:35:19] 2026-01-29 02:35:19,875 [wrapper] apfmon messages muted
[2026-01-29 03:35:19] 2026-01-29 02:35:19,877 [wrapper] ==== wrapper stdout END ====
[2026-01-29 03:35:19] 2026-01-29 02:35:19,879 [wrapper] ==== wrapper stderr END ====
[2026-01-29 03:35:19]  *** Error codes and diagnostics ***
[2026-01-29 03:35:19]     "exeErrorCode": 0,
[2026-01-29 03:35:19]     "exeErrorDiag": "",
[2026-01-29 03:35:19]     "pilotErrorCode": 0,
[2026-01-29 03:35:19]     "pilotErrorDiag": "",
[2026-01-29 03:35:19]  *** Listing of results directory ***
[2026-01-29 03:35:19] total 674252
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc      5111 Jan 28 16:24 queuedata.json
[2026-01-29 03:35:19] -rwx------ 1 boinc boinc     36322 Jan 28 16:24 runpilot2-wrapper.sh
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc    584422 Jan 28 16:24 pilot3.tar.gz
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc       100 Jan 29 02:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 03:35:19] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 02:09 run_atlas
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc       105 Jan 29 02:09 job.xml
[2026-01-29 03:35:19] -rw-r--r-- 2 boinc boinc 501944605 Jan 29 02:09 EVNT.48317869._000145.pool.root.1
[2026-01-29 03:35:19] -rw-r--r-- 2 boinc boinc    597748 Jan 29 02:09 input.tar.gz
[2026-01-29 03:35:19] -rw-r--r-- 2 boinc boinc     15845 Jan 29 02:09 start_atlas.sh
[2026-01-29 03:35:19] drwxrwx--x 2 boinc boinc      4096 Jan 29 02:09 shared
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc         0 Jan 29 02:09 boinc_setup_complete
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc      6447 Jan 29 02:09 init_data.xml
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc         0 Jan 29 02:09 boinc_lockfile
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc      2515 Jan 29 02:09 pandaJob.out
[2026-01-29 03:35:19] -rw------- 1 boinc boinc   1005755 Jan 29 02:10 agis_schedconf.cvmfs.json
[2026-01-29 03:35:19] -rw------- 1 boinc boinc   1516246 Jan 29 02:10 agis_ddmendpoints.agis.ALL.json
[2026-01-29 03:35:19] -rw------- 1 boinc boinc       427 Jan 29 02:10 workernode_map.json
[2026-01-29 03:35:19] drwx------ 5 boinc boinc      4096 Jan 29 02:10 pilot3
[2026-01-29 03:35:19] -rw------- 1 boinc boinc 182510075 Jan 29 03:34 HITS.48317872._007267.pool.root.1
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc       530 Jan 29 03:34 boinc_task_state.xml
[2026-01-29 03:35:19] -rw------- 1 boinc boinc      1016 Jan 29 03:34 memory_monitor_summary.json
[2026-01-29 03:35:19] -rw------- 1 boinc boinc    283927 Jan 29 03:34 log.48317872._007267.job.log.tgz.1
[2026-01-29 03:35:19] -rw------- 1 boinc boinc      6307 Jan 29 03:34 heartbeat.json
[2026-01-29 03:35:19] -rw------- 1 boinc boinc        95 Jan 29 03:34 pilot_heartbeat.json
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc      8192 Jan 29 03:35 boinc_mmap_file
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc        27 Jan 29 03:35 wrapper_checkpoint.txt
[2026-01-29 03:35:19] -rw------- 1 boinc boinc      4748 Jan 29 03:35 pilotlog.txt
[2026-01-29 03:35:19] -rw------- 1 boinc boinc    740613 Jan 29 03:35 log.48317872._007267.job.log.1
[2026-01-29 03:35:19] -rw------- 1 boinc boinc       357 Jan 29 03:35 output.list
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc       620 Jan 29 03:35 runtime_log
[2026-01-29 03:35:19] -rw------- 1 boinc boinc   1044480 Jan 29 03:35 result.tar.gz
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc      8916 Jan 29 03:35 runtime_log.err
[2026-01-29 03:35:19] -rw------- 1 boinc boinc       661 Jan 29 03:35 bFoMDm0ZM58n9Rq4apOajLDm4fhM0noT9bVooX4SDmsJGKDmyClLPm.diag
[2026-01-29 03:35:19] -rw-r--r-- 1 boinc boinc      7519 Jan 29 03:35 stderr.txt
[2026-01-29 03:35:19] HITS file was successfully produced:
[2026-01-29 03:35:19] -rw------- 1 boinc boinc 182510075 Jan 29 03:34 shared/HITS.pool.root.1
[2026-01-29 03:35:19]  *** Contents of shared directory: ***
[2026-01-29 03:35:19] total 670048
[2026-01-29 03:35:19] -rw-r--r-- 2 boinc boinc 501944605 Jan 29 02:09 ATLAS.root_0
[2026-01-29 03:35:19] -rw-r--r-- 2 boinc boinc    597748 Jan 29 02:09 input.tar.gz
[2026-01-29 03:35:19] -rw-r--r-- 2 boinc boinc     15845 Jan 29 02:09 start_atlas.sh
[2026-01-29 03:35:19] -rw------- 1 boinc boinc 182510075 Jan 29 03:34 HITS.pool.root.1
[2026-01-29 03:35:19] -rw------- 1 boinc boinc   1044480 Jan 29 03:35 result.tar.gz
03:35:21 (4165043): run_atlas exited; CPU time 14498.879068
03:35:21 (4165043): called boinc_finish(0)

</stderr_txt>
]]>

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