Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:08:45 (13381): wrapper (7.7.26015): starting
14:08:45 (13381): wrapper: running run_atlas (--nthreads 8)
[2026-01-28 14:08:45] Arguments: --nthreads 8
[2026-01-28 14:08:45] Threads: 8
[2026-01-28 14:08:45] Checking for CVMFS
[2026-01-28 14:08:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 14:08:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 14:08:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 14:08:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 14:08:45] 2.11.2.0 2765 158367 92252 155622 3 188 19142667 20275200 1 130560 0 40694367 99.815 11150544 31806 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-28 14:08:45] CVMFS is ok
[2026-01-28 14:08:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 14:08:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 14:08:45] Further information can be found at the LHC@home message board.
[2026-01-28 14:08:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 14:08:45] Checking for apptainer binary...
[2026-01-28 14:08:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 14:08:45] Running /usr/bin/apptainer --version
[2026-01-28 14:08:45] apptainer version 1.3.2-1.el7
[2026-01-28 14:08:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 14:08:47] c-204-21.aglt2.org
[2026-01-28 14:08:47] apptainer works
[2026-01-28 14:08:47] Set ATHENA_PROC_NUMBER=8
[2026-01-28 14:08:47] Set ATHENA_CORE_NUMBER=8
[2026-01-28 14:08:47] Starting ATLAS job with PandaID=6976712524
[2026-01-28 14:08:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 16:05:27]  *** The last 200 lines of the pilot log: ***
[2026-01-28 16:05:27] 2026-01-28 21:04:36,780 | INFO     | sum of deviations: -10495639229.499998
[2026-01-28 16:05:27] 2026-01-28 21:04:36,780 | INFO     | mean x: 1769630822.5
[2026-01-28 16:05:27] 2026-01-28 21:04:36,780 | INFO     | mean y: 2566297.236842105
[2026-01-28 16:05:27] 2026-01-28 21:04:36,780 | INFO     | intersect: 40435197917.356865
[2026-01-28 16:05:27] 2026-01-28 21:04:36,781 | INFO     | chi2: 2.527182846269135
[2026-01-28 16:05:27] 2026-01-28 21:04:36,781 | INFO     | sum of square deviations: 401533110.0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,781 | INFO     | sum of deviations: -1589907538.0000038
[2026-01-28 16:05:27] 2026-01-28 21:04:36,782 | INFO     | mean x: 1769630670.0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,782 | INFO     | mean y: 2589080.4770642202
[2026-01-28 16:05:27] 2026-01-28 21:04:36,782 | INFO     | intersect: 7009605616.944
[2026-01-28 16:05:27] 2026-01-28 21:04:36,782 | INFO     | chi2: 1.76854923900131
[2026-01-28 16:05:27] 2026-01-28 21:04:36,782 | INFO     | current chi2=1.76854923900131 (change=30.018944153082998 %)
[2026-01-28 16:05:27] 2026-01-28 21:04:36,782 | INFO     | sum of square deviations: 348769330.0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,783 | INFO     | sum of deviations: -358527499.9999988
[2026-01-28 16:05:27] 2026-01-28 21:04:36,783 | INFO     | mean x: 1769630517.5
[2026-01-28 16:05:27] 2026-01-28 21:04:36,783 | INFO     | mean y: 2592642.1153846155
[2026-01-28 16:05:27] 2026-01-28 21:04:36,783 | INFO     | intersect: 1821735412.9633236
[2026-01-28 16:05:27] 2026-01-28 21:04:36,784 | INFO     | chi2: 1.7718622249669982
[2026-01-28 16:05:27] 2026-01-28 21:04:36,784 | INFO     | current chi2=1.7718622249669982 (change=-0.187327889584743 %)
[2026-01-28 16:05:27] 2026-01-28 21:04:36,784 | INFO     | right removable region: 103
[2026-01-28 16:05:27] 2026-01-28 21:04:36,784 | INFO     | sum of square deviations: 401533110.0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,785 | INFO     | sum of deviations: -28747282241.999996
[2026-01-28 16:05:27] 2026-01-28 21:04:36,785 | INFO     | mean x: 1769630975.0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,785 | INFO     | mean y: 2613503.018348624
[2026-01-28 16:05:27] 2026-01-28 21:04:36,785 | INFO     | intersect: 126697224322.31203
[2026-01-28 16:05:27] 2026-01-28 21:04:36,785 | INFO     | chi2: 0.9525029719590457
[2026-01-28 16:05:27] 2026-01-28 21:04:36,785 | INFO     | current chi2=0.9525029719590457 (change=62.309693049506876 %)
[2026-01-28 16:05:27] 2026-01-28 21:04:36,786 | INFO     | sum of square deviations: 348769330.0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,786 | INFO     | sum of deviations: -29981987298.5
[2026-01-28 16:05:27] 2026-01-28 21:04:36,786 | INFO     | mean x: 1769631127.5
[2026-01-28 16:05:27] 2026-01-28 21:04:36,786 | INFO     | mean y: 2616912.1634615385
[2026-01-28 16:05:27] 2026-01-28 21:04:36,786 | INFO     | intersect: 152129118367.25192
[2026-01-28 16:05:27] 2026-01-28 21:04:36,787 | INFO     | chi2: 0.8880989934883147
[2026-01-28 16:05:27] 2026-01-28 21:04:36,787 | INFO     | current chi2=0.8880989934883147 (change=6.761551445689361 %)
[2026-01-28 16:05:27] 2026-01-28 21:04:36,787 | INFO     | left removable region: 20
[2026-01-28 16:05:27] 2026-01-28 21:04:36,787 | INFO     | sum of square deviations: 177275882.0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,787 | INFO     | sum of deviations: -14967211564.0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,788 | INFO     | mean x: 1769631097.0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,788 | INFO     | mean y: 2636996.1445783135
[2026-01-28 16:05:27] 2026-01-28 21:04:36,788 | INFO     | intersect: 149410682355.81967
[2026-01-28 16:05:27] 2026-01-28 21:04:36,788 | INFO     | chi2: 0.07189634023085956
[2026-01-28 16:05:27] 2026-01-28 21:04:36,788 | INFO     | current memory leak: -84.43 B/s (using 83 data points, chi2=0.07)
[2026-01-28 16:05:27] 2026-01-28 21:04:36,789 | INFO     | could have reported an average CPU frequency of 1679 MHz (7 samples)
[2026-01-28 16:05:27] 2026-01-28 21:04:36,789 | INFO     | ..............................
[2026-01-28 16:05:27] 2026-01-28 21:04:36,789 | INFO     | . Timing measurements:
[2026-01-28 16:05:27] 2026-01-28 21:04:36,789 | INFO     | . get job = 0 s
[2026-01-28 16:05:27] 2026-01-28 21:04:36,789 | INFO     | . initial setup = 8 s
[2026-01-28 16:05:27] 2026-01-28 21:04:36,789 | INFO     | . payload setup = 8 s
[2026-01-28 16:05:27] 2026-01-28 21:04:36,789 | INFO     | . stage-in = 0 s
[2026-01-28 16:05:27] 2026-01-28 21:04:36,789 | INFO     | . payload execution = 6901 s
[2026-01-28 16:05:27] 2026-01-28 21:04:36,790 | INFO     | . stage-out = 0 s
[2026-01-28 16:05:27] 2026-01-28 21:04:36,790 | INFO     | . log creation = 0 s
[2026-01-28 16:05:27] 2026-01-28 21:04:36,790 | INFO     | ..............................
[2026-01-28 16:05:27] 2026-01-28 21:04:36,874 | INFO     | 
[2026-01-28 16:05:27] 2026-01-28 21:04:36,874 | INFO     | job summary report
[2026-01-28 16:05:27] 2026-01-28 21:04:36,874 | INFO     | --------------------------------------------------
[2026-01-28 16:05:27] 2026-01-28 21:04:36,874 | INFO     | PanDA job id: 6976712524
[2026-01-28 16:05:27] 2026-01-28 21:04:36,875 | INFO     | task id: 48298244
[2026-01-28 16:05:27] 2026-01-28 21:04:36,875 | INFO     | errors: (none)
[2026-01-28 16:05:27] 2026-01-28 21:04:36,875 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 16:05:27] 2026-01-28 21:04:36,875 | INFO     | pilot state: finished 
[2026-01-28 16:05:27] 2026-01-28 21:04:36,875 | INFO     | transexitcode: 0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,875 | INFO     | exeerrorcode: 0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,875 | INFO     | exeerrordiag: 
[2026-01-28 16:05:27] 2026-01-28 21:04:36,876 | INFO     | exitcode: 0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,876 | INFO     | exitmsg: OK
[2026-01-28 16:05:27] 2026-01-28 21:04:36,876 | INFO     | cpuconsumptiontime: 51010 s
[2026-01-28 16:05:27] 2026-01-28 21:04:36,876 | INFO     | nevents: 400
[2026-01-28 16:05:27] 2026-01-28 21:04:36,876 | INFO     | neventsw: 0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,876 | INFO     | pid: 21557
[2026-01-28 16:05:27] 2026-01-28 21:04:36,876 | INFO     | pgrp: 21557
[2026-01-28 16:05:27] 2026-01-28 21:04:36,876 | INFO     | corecount: 8
[2026-01-28 16:05:27] 2026-01-28 21:04:36,876 | INFO     | event service: False
[2026-01-28 16:05:27] 2026-01-28 21:04:36,877 | INFO     | sizes: {0: 2284365, 11: 2284365, 6913: 2311540, 6915: 2320732}
[2026-01-28 16:05:27] 2026-01-28 21:04:36,877 | INFO     | --------------------------------------------------
[2026-01-28 16:05:27] 2026-01-28 21:04:36,877 | INFO     | 
[2026-01-28 16:05:27] 2026-01-28 21:04:36,877 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-28 16:05:27] 2026-01-28 21:04:36,906 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,908 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,908 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,908 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,909 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,909 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,909 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,909 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,911 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 16:05:27] 2026-01-28 21:04:36,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,911 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 16:05:27] 2026-01-28 21:04:36,911 | INFO     | job 6976712524 has completed (purged errors)
[2026-01-28 16:05:27] 2026-01-28 21:04:36,912 | INFO     | overall cleanup function is called
[2026-01-28 16:05:27] 2026-01-28 21:04:37,920 | INFO     | --- collectZombieJob: --- 10, [21557]
[2026-01-28 16:05:27] 2026-01-28 21:04:37,920 | INFO     | zombie collector waiting for pid 21557
[2026-01-28 16:05:27] 2026-01-28 21:04:37,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 16:05:27] 2026-01-28 21:04:37,920 | INFO     | collected zombie processes
[2026-01-28 16:05:27] 2026-01-28 21:04:37,921 | INFO     | will attempt to kill all subprocesses of pid=21557
[2026-01-28 16:05:27] 2026-01-28 21:04:38,007 | INFO     | process IDs to be killed: [21557] (in reverse order)
[2026-01-28 16:05:27] 2026-01-28 21:04:38,071 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 16:05:27] 2026-01-28 21:04:38,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 16:05:27] 2026-01-28 21:04:38,075 | INFO     | did not find any defunct processes belonging to 21557
[2026-01-28 16:05:27] 2026-01-28 21:04:38,078 | INFO     | did not find any defunct processes belonging to 21557
[2026-01-28 16:05:27] 2026-01-28 21:04:38,079 | INFO     | ready for new job
[2026-01-28 16:05:27] 2026-01-28 21:04:38,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 16:05:27] 2026-01-28 21:04:38,081 | INFO     | **************************************
[2026-01-28 16:05:27] 2026-01-28 21:04:38,081 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 16:05:27] 2026-01-28 21:04:38,081 | INFO     | **************************************
[2026-01-28 16:05:27] 2026-01-28 21:04:38,082 | INFO     | 
[2026-01-28 16:05:27] 2026-01-28 21:04:38,082 | INFO     | architecture information:
[2026-01-28 16:05:27] 2026-01-28 21:04:38,083 | INFO     | executing command: cat /etc/os-release
[2026-01-28 16:05:27] 2026-01-28 21:04:38,103 | INFO     | cat /etc/os-release:
[2026-01-28 16:05:27] NAME="CentOS Linux"
[2026-01-28 16:05:27] VERSION="7 (Core)"
[2026-01-28 16:05:27] ID="centos"
[2026-01-28 16:05:27] ID_LIKE="rhel fedora"
[2026-01-28 16:05:27] VERSION_ID="7"
[2026-01-28 16:05:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 16:05:27] ANSI_COLOR="0;31"
[2026-01-28 16:05:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 16:05:27] HOME_URL="https://www.centos.org/"
[2026-01-28 16:05:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 16:05:27] 
[2026-01-28 16:05:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 16:05:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 16:05:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 16:05:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 16:05:27] 
[2026-01-28 16:05:27] 2026-01-28 21:04:38,103 | INFO     | **************************************
[2026-01-28 16:05:27] 2026-01-28 21:04:38,607 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-28 16:05:27] 2026-01-28 21:04:38,627 | INFO     | sufficient remaining disk space (18483249152 B)
[2026-01-28 16:05:27] 2026-01-28 21:04:38,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 16:05:27] 2026-01-28 21:04:38,628 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 16:05:27] 2026-01-28 21:04:38,628 | INFO     | update_server=False
[2026-01-28 16:05:27] 2026-01-28 21:04:38,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 16:05:27] 2026-01-28 21:04:38,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 16:05:27] 2026-01-28 21:04:38,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 16:05:27] 2026-01-28 21:04:39,634 | INFO     | [job] retrieve thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:39,634 | INFO     | [job] queue monitor thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:39,674 | INFO     | all data control threads have been joined
[2026-01-28 16:05:27] 2026-01-28 21:04:39,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 16:05:27] 2026-01-28 21:04:39,724 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:39,867 | INFO     | all job control threads have been joined
[2026-01-28 16:05:27] 2026-01-28 21:04:40,098 | INFO     | all payload control threads have been joined
[2026-01-28 16:05:27] 2026-01-28 21:04:40,139 | INFO     | [payload] failed_post thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:40,219 | INFO     | [job] validate thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:40,629 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:40,658 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:40,680 | INFO     | [data] control thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:40,873 | INFO     | [job] control thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:41,017 | INFO     | [payload] validate_post thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:41,085 | INFO     | [data] copytool_in thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:41,085 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:41,103 | INFO     | [payload] control thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:41,483 | WARNING  | process 21557 can no longer be monitored (due to stat problems) - aborting
[2026-01-28 16:05:27] 2026-01-28 21:04:41,557 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 16:05:27] 2026-01-28 21:04:41,559 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 16:05:27] 2026-01-28 21:04:41,559 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-28 16:05:27] 2026-01-28 21:04:41,559 | WARNING  | maxPSS not found in memory monitor output
[2026-01-28 16:05:27] 2026-01-28 21:04:41,560 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6976712524/payload.stdout) since it has not been created yet
[2026-01-28 16:05:27] 2026-01-28 21:04:41,560 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-28 16:05:27] 2026-01-28 21:04:41,582 | INFO     | sufficient remaining disk space (18483249152 B)
[2026-01-28 16:05:27] 2026-01-28 21:04:41,582 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-28 16:05:27] 2026-01-28 21:04:41,583 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6976712524/HITS.48298244._000078.pool.root.1 since it does not exist
[2026-01-28 16:05:27] 2026-01-28 21:04:41,674 | INFO     | number of running child processes to parent process 21557: 1
[2026-01-28 16:05:27] 2026-01-28 21:04:41,674 | INFO     | maximum number of monitored processes: 6
[2026-01-28 16:05:27] 2026-01-28 21:04:41,674 | INFO     | aborting job monitoring since job object (job id=6976712524) has expired
[2026-01-28 16:05:27] 2026-01-28 21:04:41,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 16:05:27] 2026-01-28 21:04:41,674 | INFO     | will abort loop
[2026-01-28 16:05:27] 2026-01-28 21:04:41,692 | INFO     | [data] copytool_out thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:42,635 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:04:42,680 | INFO     | [job] job monitor thread has finished
[2026-01-28 16:05:27] 2026-01-28 21:05:09,826 | INFO     | PID=17058 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-28 16:05:27] 2026-01-28 21:05:09,827 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 16:05:27] 2026-01-28 21:05:09,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 16:05:27] 2026-01-28 21:05:09,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 16:05:27] 2026-01-28 21:05:21,007 | INFO     | [monitor] cgroup control has ended
[2026-01-28 16:05:27] 2026-01-28 21:05:22,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140031526893376)>', '<ExcThread(monitor, started 140030337074944)>']
[2026-01-28 16:05:27] 2026-01-28 21:05:22,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 16:05:27] 2026-01-28 21:05:22,877 | INFO     | [monitor] control thread has ended
[2026-01-28 16:05:27] 2026-01-28 21:05:27,240 | INFO     | all workflow threads have been joined
[2026-01-28 16:05:27] 2026-01-28 21:05:27,240 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 16:05:27] 2026-01-28 21:05:27,241 | INFO     | traces error code: 0
[2026-01-28 16:05:27] 2026-01-28 21:05:27,241 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 16:05:27] 2026-01-28 21:05:27,362 [wrapper] ==== pilot stdout END ====
[2026-01-28 16:05:27] 2026-01-28 21:05:27,367 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 16:05:27] 2026-01-28 21:05:27,372 [wrapper] pilotpid: 17058
[2026-01-28 16:05:27] 2026-01-28 21:05:27,377 [wrapper] Pilot exit status: 0
[2026-01-28 16:05:27] 2026-01-28 21:05:27,396 [wrapper] pandaids: 6976712524
[2026-01-28 16:05:27] 2026-01-28 21:05:27,444 [wrapper] cleanup supervisor_pilot 32344 17059
[2026-01-28 16:05:27] 2026-01-28 21:05:27,449 [wrapper] Test setup, not cleaning
[2026-01-28 16:05:27] 2026-01-28 21:05:27,454 [wrapper] apfmon messages muted
[2026-01-28 16:05:27] 2026-01-28 21:05:27,459 [wrapper] ==== wrapper stdout END ====
[2026-01-28 16:05:27] 2026-01-28 21:05:27,463 [wrapper] ==== wrapper stderr END ====
[2026-01-28 16:05:27]  *** Error codes and diagnostics ***
[2026-01-28 16:05:27]     "exeErrorCode": 0,
[2026-01-28 16:05:27]     "exeErrorDiag": "",
[2026-01-28 16:05:27]     "pilotErrorCode": 0,
[2026-01-28 16:05:27]     "pilotErrorDiag": "",
[2026-01-28 16:05:27]  *** Listing of results directory ***
[2026-01-28 16:05:27] total 422012
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas    584422 Jan 20 13:02 pilot3.tar.gz
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas      5111 Jan 20 13:05 queuedata.json
[2026-01-28 16:05:27] -rwx------ 1 boincer umatlas     36322 Jan 20 13:05 runpilot2-wrapper.sh
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas       100 Jan 28 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 16:05:27] -rwxr-xr-x 1 boincer umatlas      7986 Jan 28 14:08 run_atlas
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas       105 Jan 28 14:08 job.xml
[2026-01-28 16:05:27] -rw-r--r-- 2 boincer umatlas 257927759 Jan 28 14:08 EVNT.48298242._000003.pool.root.1
[2026-01-28 16:05:27] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 14:08 start_atlas.sh
[2026-01-28 16:05:27] drwxrwx--x 2 boincer umatlas      4096 Jan 28 14:08 shared
[2026-01-28 16:05:27] -rw-r--r-- 2 boincer umatlas    597773 Jan 28 14:08 input.tar.gz
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas         0 Jan 28 14:08 boinc_lockfile
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas      2614 Jan 28 14:08 pandaJob.out
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas        57 Jan 28 14:08 setup.sh.local
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas   1005192 Jan 28 14:09 agis_schedconf.cvmfs.json
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas   1516246 Jan 28 14:09 agis_ddmendpoints.agis.ALL.json
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas       432 Jan 28 14:09 workernode_map.json
[2026-01-28 16:05:27] drwx------ 5 boincer umatlas      4096 Jan 28 14:09 pilot3
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas      5910 Jan 28 16:03 init_data.xml
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas 167616701 Jan 28 16:04 HITS.48298244._000078.pool.root.1
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas       530 Jan 28 16:04 boinc_task_state.xml
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas      1047 Jan 28 16:04 memory_monitor_summary.json
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas    344199 Jan 28 16:04 log.48298244._000078.job.log.tgz.1
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas      6393 Jan 28 16:04 heartbeat.json
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas        95 Jan 28 16:05 pilot_heartbeat.json
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas      8192 Jan 28 16:05 boinc_mmap_file
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas        27 Jan 28 16:05 wrapper_checkpoint.txt
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas      6223 Jan 28 16:05 pilotlog.txt
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas    982044 Jan 28 16:05 log.48298244._000078.job.log.1
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas       357 Jan 28 16:05 output.list
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas       620 Jan 28 16:05 runtime_log
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas   1341440 Jan 28 16:05 result.tar.gz
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas       658 Jan 28 16:05 v5fNDm8HV28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBVpKDmcfCjRm.diag
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas      9341 Jan 28 16:05 runtime_log.err
[2026-01-28 16:05:27] -rw-r--r-- 1 boincer umatlas     21349 Jan 28 16:05 stderr.txt
[2026-01-28 16:05:27] HITS file was successfully produced:
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas 167616701 Jan 28 16:04 shared/HITS.pool.root.1
[2026-01-28 16:05:27]  *** Contents of shared directory: ***
[2026-01-28 16:05:27] total 417492
[2026-01-28 16:05:27] -rw-r--r-- 2 boincer umatlas 257927759 Jan 28 14:08 ATLAS.root_0
[2026-01-28 16:05:27] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 14:08 start_atlas.sh
[2026-01-28 16:05:27] -rw-r--r-- 2 boincer umatlas    597773 Jan 28 14:08 input.tar.gz
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas 167616701 Jan 28 16:04 HITS.pool.root.1
[2026-01-28 16:05:27] -rw------- 1 boincer umatlas   1341440 Jan 28 16:05 result.tar.gz
16:05:28 (13381): run_atlas exited; CPU time 50960.170316
16:05:28 (13381): called boinc_finish(0)

</stderr_txt>
]]>

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