Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:48:57 (245710): wrapper (7.7.26015): starting
14:48:57 (245710): wrapper: running run_atlas (--nthreads 12)
[2026-01-28 14:48:57] Arguments: --nthreads 12
[2026-01-28 14:48:57] Threads: 12
[2026-01-28 14:48:57] Checking for CVMFS
[2026-01-28 14:48:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 14:48:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 14:48:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 14:48:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 14:48:57] 2.11.5.0 2129 188317 216644 155626 3 440 23955863 45568000 18456 130560 0 1674192675 99.828 879791531 22018 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-28 14:48:57] CVMFS is ok
[2026-01-28 14:48:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 14:48:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 14:48:57] Further information can be found at the LHC@home message board.
[2026-01-28 14:48:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 14:48:57] Checking for apptainer binary...
[2026-01-28 14:48:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 14:48:57] Running /usr/bin/apptainer --version
[2026-01-28 14:48:57] apptainer version 1.4.1-1.el9
[2026-01-28 14:48:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 14:48:58] wns0037.triumf.lcg
[2026-01-28 14:48:58] apptainer works
[2026-01-28 14:48:58] Set ATHENA_PROC_NUMBER=12
[2026-01-28 14:48:58] Set ATHENA_CORE_NUMBER=12
[2026-01-28 14:48:58] Starting ATLAS job with PandaID=6986359498
[2026-01-28 14:48:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 14:53:25]  *** The last 200 lines of the pilot log: ***
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | could have reported an average CPU frequency of 2760 MHz (4 samples)
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | ..............................
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . Timing measurements:
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . get job = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . initial setup = 9 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . payload setup = 10 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . stage-in = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . payload execution = 31 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . stage-out = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . log creation = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | ..............................
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6986359498/pilotlog.txt
[2026-01-28 14:53:25] 2026-01-28 22:52:18,932 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-28 14:53:25] - Log from pilotlog.txt -
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | WARNING  | found no stored workdir sizes
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | INFO     | will not add max space = 0 B to job metrics
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | WARNING  | wrong length of table data, x=[1769640592.0], y=[1699.0] (must be same and length>=4)
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | could have reported an average CPU frequency of 2760 MHz (4 samples)
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | ..............................
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . Timing measurements:
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . get job = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . initial setup = 9 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . payload setup = 10 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . stage-in = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . payload execution = 31 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . stage-out = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . log creation = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | ..............................
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6986359498/pilotlog.txt
[2026-01-28 14:53:25] 2026-01-28 22:52:18,932 | WARNING  | 
[2026-01-28 14:53:25] [begin log extracts]
[2026-01-28 14:53:25] - Log from pilotlog.txt -
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | WARNING  | found no stored workdir sizes
[2026-01-28 14:53:25] 2026-01-28 22:52:18,913 | INFO     | will not add max space = 0 B to job metrics
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | WARNING  | wrong length of table data, x=[1769640592.0], y=[1699.0] (must be same and length>=4)
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | could have reported an average CPU frequency of 2760 MHz (4 samples)
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | ..............................
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . Timing measurements:
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . get job = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . initial setup = 9 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . payload setup = 10 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . stage-in = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . payload execution = 31 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . stage-out = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | . log creation = 0 s
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | ..............................
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-28 14:53:25] 2026-01-28 22:52:18,914 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6986359498/pilotlog.txt
[2026-01-28 14:53:25] [end log extracts]
[2026-01-28 14:53:25] 2026-01-28 22:52:18,932 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-28 14:53:25] 2026-01-28 22:52:18,933 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-28 14:53:25] 2026-01-28 22:52:19,372 | INFO     | 
[2026-01-28 14:53:25] 2026-01-28 22:52:19,372 | INFO     | job summary report
[2026-01-28 14:53:25] 2026-01-28 22:52:19,372 | INFO     | --------------------------------------------------
[2026-01-28 14:53:25] 2026-01-28 22:52:19,372 | INFO     | PanDA job id: 6986359498
[2026-01-28 14:53:25] 2026-01-28 22:52:19,372 | INFO     | task id: 48317971
[2026-01-28 14:53:25] 2026-01-28 22:52:19,372 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-28 14:50:09,459 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-28 14:53:25] 2026-01-28 22:52:19,372 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | pilot state: failed 
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | transexitcode: 65
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | exeerrorcode: 65
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | exitcode: 65
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | cpuconsumptiontime: 13 s
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | nevents: 0
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | neventsw: 0
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | pid: 255069
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | pgrp: 255069
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | corecount: 12
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | event service: False
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | sizes: {0: 2284162, 1: 2284250, 11: 2284250, 46: 2311704, 50: 2311704, 168: 2311870}
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | --------------------------------------------------
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | 
[2026-01-28 14:53:25] 2026-01-28 22:52:19,373 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-28 14:53:25] 2026-01-28 22:52:19,389 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,389 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 14:53:25] 2026-01-28 22:52:19,390 | INFO     | job 6986359498 has completed (purged errors)
[2026-01-28 14:53:25] 2026-01-28 22:52:19,391 | INFO     | overall cleanup function is called
[2026-01-28 14:53:25] 2026-01-28 22:52:19,771 | INFO     | PID=249361 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-28 14:53:25] 2026-01-28 22:52:19,771 | INFO     | .. there are 20 such processes running
[2026-01-28 14:53:25] 2026-01-28 22:52:20,397 | INFO     | --- collectZombieJob: --- 10, [255069]
[2026-01-28 14:53:25] 2026-01-28 22:52:20,397 | INFO     | zombie collector waiting for pid 255069
[2026-01-28 14:53:25] 2026-01-28 22:52:20,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 14:53:25] 2026-01-28 22:52:20,397 | INFO     | collected zombie processes
[2026-01-28 14:53:25] 2026-01-28 22:52:20,397 | INFO     | will attempt to kill all subprocesses of pid=255069
[2026-01-28 14:53:25] 2026-01-28 22:52:20,559 | INFO     | process IDs to be killed: [255069] (in reverse order)
[2026-01-28 14:53:25] 2026-01-28 22:52:20,857 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 14:53:25] 2026-01-28 22:52:20,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 14:53:25] 2026-01-28 22:52:20,864 | INFO     | did not find any defunct processes belonging to 255069
[2026-01-28 14:53:25] 2026-01-28 22:52:20,870 | INFO     | did not find any defunct processes belonging to 255069
[2026-01-28 14:53:25] 2026-01-28 22:52:20,870 | INFO     | ready for new job
[2026-01-28 14:53:25] 2026-01-28 22:52:20,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 14:53:25] 2026-01-28 22:52:20,872 | INFO     | **************************************
[2026-01-28 14:53:25] 2026-01-28 22:52:20,872 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 14:53:25] 2026-01-28 22:52:20,872 | INFO     | **************************************
[2026-01-28 14:53:25] 2026-01-28 22:52:20,872 | INFO     | 
[2026-01-28 14:53:25] 2026-01-28 22:52:20,874 | INFO     | architecture information:
[2026-01-28 14:53:25] 2026-01-28 22:52:20,874 | INFO     | executing command: cat /etc/os-release
[2026-01-28 14:53:25] 2026-01-28 22:52:20,894 | INFO     | cat /etc/os-release:
[2026-01-28 14:53:25] NAME="CentOS Linux"
[2026-01-28 14:53:25] VERSION="7 (Core)"
[2026-01-28 14:53:25] ID="centos"
[2026-01-28 14:53:25] ID_LIKE="rhel fedora"
[2026-01-28 14:53:25] VERSION_ID="7"
[2026-01-28 14:53:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 14:53:25] ANSI_COLOR="0;31"
[2026-01-28 14:53:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 14:53:25] HOME_URL="https://www.centos.org/"
[2026-01-28 14:53:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 14:53:25] 
[2026-01-28 14:53:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 14:53:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 14:53:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 14:53:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 14:53:25] 
[2026-01-28 14:53:25] 2026-01-28 22:52:20,894 | INFO     | **************************************
[2026-01-28 14:53:25] 2026-01-28 22:52:21,402 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-28 14:53:25] 2026-01-28 22:52:21,468 | INFO     | sufficient remaining disk space (1978863190016 B)
[2026-01-28 14:53:25] 2026-01-28 22:52:21,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 14:53:25] 2026-01-28 22:52:21,469 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 14:53:25] 2026-01-28 22:52:21,469 | INFO     | update_server=False
[2026-01-28 14:53:25] 2026-01-28 22:52:21,469 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 14:53:25] 2026-01-28 22:52:21,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 14:53:25] 2026-01-28 22:52:21,952 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-28 14:53:25] 2026-01-28 22:52:21,952 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-28 14:53:25] 2026-01-28 22:52:21,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 14:53:25] 2026-01-28 22:52:21,952 | INFO     | will abort loop
[2026-01-28 14:53:25] 2026-01-28 22:52:22,245 | INFO     | all payload control threads have been joined
[2026-01-28 14:53:25] 2026-01-28 22:52:22,370 | INFO     | all job control threads have been joined
[2026-01-28 14:53:25] 2026-01-28 22:52:22,475 | INFO     | [job] retrieve thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:22,545 | INFO     | all data control threads have been joined
[2026-01-28 14:53:25] 2026-01-28 22:52:22,558 | INFO     | [data] copytool_in thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:22,622 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:22,851 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:22,958 | INFO     | [job] job monitor thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:22,987 | INFO     | [payload] failed_post thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:23,261 | INFO     | [payload] control thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:23,376 | INFO     | [job] control thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:23,477 | INFO     | [data] copytool_out thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:23,493 | INFO     | [job] validate thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:23,552 | INFO     | [data] control thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:23,755 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:23,828 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:23,931 | INFO     | [payload] validate_post thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:24,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 14:53:25] 2026-01-28 22:52:24,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 14:53:25] 2026-01-28 22:52:25,011 | INFO     | [job] queue monitor thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:28,057 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 14:53:25] 2026-01-28 22:52:52,019 | INFO     | PID=249361 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-28 14:53:25] 2026-01-28 22:52:52,019 | INFO     | .. there are 21 such processes running
[2026-01-28 14:53:25] 2026-01-28 22:52:52,020 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 14:53:25] 2026-01-28 22:52:52,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 14:53:25] 2026-01-28 22:52:52,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 14:53:25] 2026-01-28 22:53:20,006 | INFO     | [monitor] cgroup control has ended
[2026-01-28 14:53:25] 2026-01-28 22:53:20,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318629394240)>', '<ExcThread(monitor, started 140318225708800)>']
[2026-01-28 14:53:25] 2026-01-28 22:53:21,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 14:53:25] 2026-01-28 22:53:21,197 | INFO     | [monitor] control thread has ended
[2026-01-28 14:53:25] 2026-01-28 22:53:25,320 | INFO     | all workflow threads have been joined
[2026-01-28 14:53:25] 2026-01-28 22:53:25,320 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 14:53:25] 2026-01-28 22:53:25,320 | INFO     | traces error code: 0
[2026-01-28 14:53:25] 2026-01-28 22:53:25,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 14:53:25] 2026-01-28 22:53:25,449 [wrapper] ==== pilot stdout END ====
[2026-01-28 14:53:25] 2026-01-28 22:53:25,452 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 14:53:25] 2026-01-28 22:53:25,454 [wrapper] pilotpid: 249361
[2026-01-28 14:53:25] 2026-01-28 22:53:25,471 [wrapper] Pilot exit status: 0
[2026-01-28 14:53:25] 2026-01-28 22:53:25,486 [wrapper] pandaids: 6986359498
[2026-01-28 14:53:25] 2026-01-28 22:53:25,563 [wrapper] cleanup supervisor_pilot  249367 249362
[2026-01-28 14:53:25] 2026-01-28 22:53:25,565 [wrapper] Test setup, not cleaning
[2026-01-28 14:53:25] 2026-01-28 22:53:25,567 [wrapper] apfmon messages muted
[2026-01-28 14:53:25] 2026-01-28 22:53:25,569 [wrapper] ==== wrapper stdout END ====
[2026-01-28 14:53:25] 2026-01-28 22:53:25,571 [wrapper] ==== wrapper stderr END ====
[2026-01-28 14:53:25]  *** Error codes and diagnostics ***
[2026-01-28 14:53:25]     "exeErrorCode": 65,
[2026-01-28 14:53:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-28 14:53:25]     "pilotErrorCode": 1305,
[2026-01-28 14:53:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-28 14:53:25]  *** Listing of results directory ***
[2026-01-28 14:53:25] total 528804
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc    584422 Jan 28 10:37 pilot3.tar.gz
[2026-01-28 14:53:25] -rwx------. 1 boinc boinc     36322 Jan 28 10:38 runpilot2-wrapper.sh
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc      5111 Jan 28 10:39 queuedata.json
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc       100 Jan 28 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 14:53:25] -rwxr-xr-x. 1 boinc boinc      7986 Jan 28 14:48 run_atlas
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc       105 Jan 28 14:48 job.xml
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc      6595 Jan 28 14:48 init_data.xml
[2026-01-28 14:53:25] -rw-r--r--. 2 boinc boinc 537346813 Jan 28 14:48 EVNT.48317969._000053.pool.root.1
[2026-01-28 14:53:25] -rw-r--r--. 2 boinc boinc     15845 Jan 28 14:48 start_atlas.sh
[2026-01-28 14:53:25] drwxrwx--x. 2 boinc boinc      4096 Jan 28 14:48 shared
[2026-01-28 14:53:25] -rw-r--r--. 2 boinc boinc    597757 Jan 28 14:48 input.tar.gz
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc         0 Jan 28 14:48 boinc_lockfile
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc      2514 Jan 28 14:48 pandaJob.out
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc   1005755 Jan 28 14:49 agis_schedconf.cvmfs.json
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc   1516246 Jan 28 14:49 agis_ddmendpoints.agis.ALL.json
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc       444 Jan 28 14:49 workernode_map.json
[2026-01-28 14:53:25] drwx------. 5 boinc boinc      4096 Jan 28 14:49 pilot3
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc       523 Jan 28 14:50 boinc_task_state.xml
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc       953 Jan 28 14:50 memory_monitor_summary.json
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc     20927 Jan 28 14:50 log.48317971._002658.job.log.tgz.1
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc        95 Jan 28 14:52 pilot_heartbeat.json
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc      7003 Jan 28 14:52 heartbeat.json
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc        22 Jan 28 14:53 wrapper_checkpoint.txt
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc      8192 Jan 28 14:53 boinc_mmap_file
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc      5004 Jan 28 14:53 pilotlog.txt
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc     82368 Jan 28 14:53 log.48317971._002658.job.log.1
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc       188 Jan 28 14:53 output.list
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc       620 Jan 28 14:53 runtime_log
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc    122880 Jan 28 14:53 result.tar.gz
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc       643 Jan 28 14:53 YfWLDm6bP58n9Rq4apOajLDm4fhM0noT9bVooX4SDmYrGKDmtxNxPm.diag
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc      8635 Jan 28 14:53 runtime_log.err
[2026-01-28 14:53:25] -rw-r--r--. 1 boinc boinc     21723 Jan 28 14:53 stderr.txt
[2026-01-28 14:53:25] No HITS result produced
[2026-01-28 14:53:25]  *** Contents of shared directory: ***
[2026-01-28 14:53:25] total 525480
[2026-01-28 14:53:25] -rw-r--r--. 2 boinc boinc 537346813 Jan 28 14:48 ATLAS.root_0
[2026-01-28 14:53:25] -rw-r--r--. 2 boinc boinc     15845 Jan 28 14:48 start_atlas.sh
[2026-01-28 14:53:25] -rw-r--r--. 2 boinc boinc    597757 Jan 28 14:48 input.tar.gz
[2026-01-28 14:53:25] -rw-------. 1 boinc boinc    122880 Jan 28 14:53 result.tar.gz
14:53:27 (245710): run_atlas exited; CPU time 17.664208
14:53:27 (245710): called boinc_finish(0)

</stderr_txt>
]]>

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