Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:53:37 (16274): wrapper (7.7.26015): starting
07:53:37 (16274): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 07:53:37] Arguments: --nthreads 8
[2026-01-29 07:53:37] Threads: 8
[2026-01-29 07:53:37] Checking for CVMFS
[2026-01-29 07:53:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 07:53:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 07:53:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 07:53:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 07:53:44] 2.11.2.0 29064 63863 131412 155626 3 257 22361945 25165825 939 130560 0 22413289 99.848 14162821 2994 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-29 07:53:44] CVMFS is ok
[2026-01-29 07:53:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 07:53:44] Checking for apptainer binary...
[2026-01-29 07:53:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 07:53:44] Running /usr/bin/apptainer --version
[2026-01-29 07:53:44] apptainer version 1.3.2-1.el7
[2026-01-29 07:53:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 07:53:47] cg-vwn462.simple-grid.lan
[2026-01-29 07:53:47] apptainer works
[2026-01-29 07:53:47] Set ATHENA_PROC_NUMBER=8
[2026-01-29 07:53:47] Set ATHENA_CORE_NUMBER=8
[2026-01-29 07:53:48] Starting ATLAS job with PandaID=6986361643
[2026-01-29 07:53:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 12:35:20]  *** The last 200 lines of the pilot log: ***
[2026-01-29 12:35:20] 2026-01-29 11:34:05,189 | INFO     | total number of processed events: 400 (read)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,191 | INFO     | using path: /var/lib/boinc/slots/21/PanDA_Pilot-6986361643/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,191 | INFO     | extracted standard info from prmon json
[2026-01-29 12:35:20] 2026-01-29 11:34:05,191 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 12:35:20] 2026-01-29 11:34:05,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 12:35:20] 2026-01-29 11:34:05,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 12:35:20] 2026-01-29 11:34:05,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 12:35:20] 2026-01-29 11:34:05,197 | INFO     | fitting pss+swap vs Time
[2026-01-29 12:35:20] 2026-01-29 11:34:05,198 | INFO     | sum of square deviations: 5705372090.0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,200 | INFO     | sum of deviations: 6628556460.0000305
[2026-01-29 12:35:20] 2026-01-29 11:34:05,200 | INFO     | mean x: 1769678382.5
[2026-01-29 12:35:20] 2026-01-29 11:34:05,200 | INFO     | mean y: 2561828.090909091
[2026-01-29 12:35:20] 2026-01-29 11:34:05,201 | INFO     | intersect: -2053467627.9025178
[2026-01-29 12:35:20] 2026-01-29 11:34:05,201 | INFO     | chi2: 7.475264930733012
[2026-01-29 12:35:20] 2026-01-29 11:34:05,202 | INFO     | sum of square deviations: 5387301010.0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,204 | INFO     | sum of deviations: 26394640342.00002
[2026-01-29 12:35:20] 2026-01-29 11:34:05,204 | INFO     | mean x: 1769678230.0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,204 | INFO     | mean y: 2571175.6563706566
[2026-01-29 12:35:20] 2026-01-29 11:34:05,204 | INFO     | intersect: -8667822462.125006
[2026-01-29 12:35:20] 2026-01-29 11:34:05,208 | INFO     | chi2: 6.75831328296844
[2026-01-29 12:35:20] 2026-01-29 11:34:05,208 | INFO     | current chi2=6.75831328296844 (change=9.59098646546924 %)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,208 | INFO     | right removable region: 258
[2026-01-29 12:35:20] 2026-01-29 11:34:05,209 | INFO     | sum of square deviations: 5387301010.0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,211 | INFO     | sum of deviations: -87324272328.0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,211 | INFO     | mean x: 1769678535.0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,211 | INFO     | mean y: 2606842.5675675673
[2026-01-29 12:35:20] 2026-01-29 11:34:05,211 | INFO     | intersect: 28687822321.80363
[2026-01-29 12:35:20] 2026-01-29 11:34:05,212 | INFO     | chi2: 2.7774354607104508
[2026-01-29 12:35:20] 2026-01-29 11:34:05,212 | INFO     | current chi2=2.7774354607104508 (change=62.84498962315573 %)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,212 | INFO     | sum of square deviations: 5081276667.5
[2026-01-29 12:35:20] 2026-01-29 11:34:05,214 | INFO     | sum of deviations: -138336660496.50003
[2026-01-29 12:35:20] 2026-01-29 11:34:05,215 | INFO     | mean x: 1769678687.5
[2026-01-29 12:35:20] 2026-01-29 11:34:05,215 | INFO     | mean y: 2632138.688976378
[2026-01-29 12:35:20] 2026-01-29 11:34:05,215 | INFO     | intersect: 48181752426.78522
[2026-01-29 12:35:20] 2026-01-29 11:34:05,215 | INFO     | chi2: 1.0902890629828832
[2026-01-29 12:35:20] 2026-01-29 11:34:05,215 | INFO     | current chi2=1.0902890629828832 (change=60.744756146233044 %)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,216 | INFO     | sum of square deviations: 4787066500.0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,218 | INFO     | sum of deviations: -143197788652.0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,218 | INFO     | mean x: 1769678840.0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,218 | INFO     | mean y: 2634628.887550201
[2026-01-29 12:35:20] 2026-01-29 11:34:05,223 | INFO     | intersect: 52939876363.93271
[2026-01-29 12:35:20] 2026-01-29 11:34:05,223 | INFO     | chi2: 1.0104583281829689
[2026-01-29 12:35:20] 2026-01-29 11:34:05,223 | INFO     | current chi2=1.0104583281829689 (change=7.321978868751397 %)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,223 | INFO     | left removable region: 30
[2026-01-29 12:35:20] 2026-01-29 11:34:05,224 | INFO     | sum of square deviations: 3675146117.0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,226 | INFO     | sum of deviations: -109088349783.0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,226 | INFO     | mean x: 1769679114.5
[2026-01-29 12:35:20] 2026-01-29 11:34:05,226 | INFO     | mean y: 2639506.3947368423
[2026-01-29 12:35:20] 2026-01-29 11:34:05,226 | INFO     | intersect: 52531537161.17217
[2026-01-29 12:35:20] 2026-01-29 11:34:05,226 | INFO     | chi2: 0.203224984682378
[2026-01-29 12:35:20] 2026-01-29 11:34:05,227 | INFO     | current memory leak: -29.68 B/s (using 228 data points, chi2=0.20)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,227 | INFO     | could have reported an average CPU frequency of 2250 MHz (13 samples)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,227 | INFO     | ..............................
[2026-01-29 12:35:20] 2026-01-29 11:34:05,228 | INFO     | . Timing measurements:
[2026-01-29 12:35:20] 2026-01-29 11:34:05,228 | INFO     | . get job = 0 s
[2026-01-29 12:35:20] 2026-01-29 11:34:05,228 | INFO     | . initial setup = 123 s
[2026-01-29 12:35:20] 2026-01-29 11:34:05,228 | INFO     | . payload setup = 158 s
[2026-01-29 12:35:20] 2026-01-29 11:34:05,228 | INFO     | . stage-in = 0 s
[2026-01-29 12:35:20] 2026-01-29 11:34:05,228 | INFO     | . payload execution = 16219 s
[2026-01-29 12:35:20] 2026-01-29 11:34:05,228 | INFO     | . stage-out = 4 s
[2026-01-29 12:35:20] 2026-01-29 11:34:05,228 | INFO     | . log creation = 1 s
[2026-01-29 12:35:20] 2026-01-29 11:34:05,228 | INFO     | ..............................
[2026-01-29 12:35:20] 2026-01-29 11:34:05,219 | INFO     | time since job start (16405s) is within the limit (349056.0s)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,618 | INFO     | 
[2026-01-29 12:35:20] 2026-01-29 11:34:05,618 | INFO     | job summary report
[2026-01-29 12:35:20] 2026-01-29 11:34:05,618 | INFO     | --------------------------------------------------
[2026-01-29 12:35:20] 2026-01-29 11:34:05,618 | INFO     | PanDA job id: 6986361643
[2026-01-29 12:35:20] 2026-01-29 11:34:05,618 | INFO     | task id: 48317971
[2026-01-29 12:35:20] 2026-01-29 11:34:05,618 | INFO     | errors: (none)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,618 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 12:35:20] 2026-01-29 11:34:05,619 | INFO     | pilot state: finished 
[2026-01-29 12:35:20] 2026-01-29 11:34:05,619 | INFO     | transexitcode: 0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,619 | INFO     | exeerrorcode: 0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,619 | INFO     | exeerrordiag: 
[2026-01-29 12:35:20] 2026-01-29 11:34:05,619 | INFO     | exitcode: 0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,619 | INFO     | exitmsg: OK
[2026-01-29 12:35:20] 2026-01-29 11:34:05,619 | INFO     | cpuconsumptiontime: 59054 s
[2026-01-29 12:35:20] 2026-01-29 11:34:05,619 | INFO     | nevents: 400
[2026-01-29 12:35:20] 2026-01-29 11:34:05,619 | INFO     | neventsw: 0
[2026-01-29 12:35:20] 2026-01-29 11:34:05,619 | INFO     | pid: 24813
[2026-01-29 12:35:20] 2026-01-29 11:34:05,619 | INFO     | pgrp: 24813
[2026-01-29 12:35:20] 2026-01-29 11:34:05,620 | INFO     | corecount: 8
[2026-01-29 12:35:20] 2026-01-29 11:34:05,620 | INFO     | event service: False
[2026-01-29 12:35:20] 2026-01-29 11:34:05,620 | INFO     | sizes: {0: 2283135, 1: 2283821, 2: 2284282, 13: 2284282, 16382: 2315848, 16387: 2324848, 16389: 2325032, 16392: 2325226}
[2026-01-29 12:35:20] 2026-01-29 11:34:05,620 | INFO     | --------------------------------------------------
[2026-01-29 12:35:20] 2026-01-29 11:34:05,620 | INFO     | 
[2026-01-29 12:35:20] 2026-01-29 11:34:05,620 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2026-01-29 12:35:20] 2026-01-29 11:34:05,978 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,979 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,979 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,979 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,979 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,979 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,981 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,981 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,981 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 12:35:20] 2026-01-29 11:34:05,981 | INFO     | job 6986361643 has completed (purged errors)
[2026-01-29 12:35:20] 2026-01-29 11:34:05,981 | INFO     | overall cleanup function is called
[2026-01-29 12:35:20] 2026-01-29 11:34:06,990 | INFO     | --- collectZombieJob: --- 10, [24813]
[2026-01-29 12:35:20] 2026-01-29 11:34:06,990 | INFO     | zombie collector waiting for pid 24813
[2026-01-29 12:35:20] 2026-01-29 11:34:06,990 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 12:35:20] 2026-01-29 11:34:06,990 | INFO     | collected zombie processes
[2026-01-29 12:35:20] 2026-01-29 11:34:06,990 | INFO     | will attempt to kill all subprocesses of pid=24813
[2026-01-29 12:35:20] 2026-01-29 11:34:07,071 | INFO     | process IDs to be killed: [24813] (in reverse order)
[2026-01-29 12:35:20] 2026-01-29 11:34:07,774 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 12:35:20] 2026-01-29 11:34:07,775 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 12:35:20] 2026-01-29 11:34:07,777 | INFO     | did not find any defunct processes belonging to 24813
[2026-01-29 12:35:20] 2026-01-29 11:34:07,778 | INFO     | did not find any defunct processes belonging to 24813
[2026-01-29 12:35:20] 2026-01-29 11:34:07,779 | INFO     | ready for new job
[2026-01-29 12:35:20] 2026-01-29 11:34:07,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 12:35:20] 2026-01-29 11:34:07,781 | INFO     | **************************************
[2026-01-29 12:35:20] 2026-01-29 11:34:07,781 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 12:35:20] 2026-01-29 11:34:07,781 | INFO     | **************************************
[2026-01-29 12:35:20] 2026-01-29 11:34:07,781 | INFO     | 
[2026-01-29 12:35:20] 2026-01-29 11:34:07,782 | INFO     | pilot is running in a VM
[2026-01-29 12:35:20] 2026-01-29 11:34:07,782 | INFO     | architecture information:
[2026-01-29 12:35:20] 2026-01-29 11:34:07,791 | INFO     | executing command: cat /etc/os-release
[2026-01-29 12:35:20] 2026-01-29 11:34:08,090 | INFO     | cat /etc/os-release:
[2026-01-29 12:35:20] NAME="CentOS Linux"
[2026-01-29 12:35:20] VERSION="7 (Core)"
[2026-01-29 12:35:20] ID="centos"
[2026-01-29 12:35:20] ID_LIKE="rhel fedora"
[2026-01-29 12:35:20] VERSION_ID="7"
[2026-01-29 12:35:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 12:35:20] ANSI_COLOR="0;31"
[2026-01-29 12:35:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 12:35:20] HOME_URL="https://www.centos.org/"
[2026-01-29 12:35:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 12:35:20] 
[2026-01-29 12:35:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 12:35:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 12:35:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 12:35:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 12:35:20] 
[2026-01-29 12:35:20] 2026-01-29 11:34:08,090 | INFO     | **************************************
[2026-01-29 12:35:20] 2026-01-29 11:34:08,594 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2026-01-29 12:35:20] 2026-01-29 11:34:08,880 | INFO     | sufficient remaining disk space (495281242112 B)
[2026-01-29 12:35:20] 2026-01-29 11:34:08,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 12:35:20] 2026-01-29 11:34:08,881 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 12:35:20] 2026-01-29 11:34:08,881 | INFO     | update_server=False
[2026-01-29 12:35:20] 2026-01-29 11:34:08,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 12:35:20] 2026-01-29 11:34:08,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 12:35:20] 2026-01-29 11:34:08,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 12:35:20] 2026-01-29 11:34:08,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 12:35:20] 2026-01-29 11:34:08,889 | INFO     | aborting loop
[2026-01-29 12:35:20] 2026-01-29 11:34:09,328 | INFO     | all payload control threads have been joined
[2026-01-29 12:35:20] 2026-01-29 11:34:09,407 | INFO     | all data control threads have been joined
[2026-01-29 12:35:20] 2026-01-29 11:34:09,887 | INFO     | [job] retrieve thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:09,895 | INFO     | [job] job monitor thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:10,115 | INFO     | [data] copytool_in thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:10,334 | INFO     | [payload] control thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:10,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 12:35:20] 2026-01-29 11:34:10,413 | INFO     | [data] control thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:10,424 | INFO     | all job control threads have been joined
[2026-01-29 12:35:20] 2026-01-29 11:34:10,664 | INFO     | [payload] validate_post thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:10,895 | INFO     | [data] copytool_out thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:10,906 | INFO     | [job] validate thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:10,982 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:11,118 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:11,183 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:11,245 | INFO     | [payload] failed_post thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:11,369 | INFO     | [job] queue monitor thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:11,430 | INFO     | [job] control thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:12,894 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:19,571 | INFO     | job.realtimelogging is not enabled
[2026-01-29 12:35:20] 2026-01-29 11:34:20,577 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 12:35:20] 2026-01-29 11:34:38,377 | INFO     | PID=20344 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 12:35:20] 2026-01-29 11:34:38,378 | INFO     | .. there are 2 such processes running
[2026-01-29 12:35:20] 2026-01-29 11:34:38,378 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 12:35:20] 2026-01-29 11:34:38,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 12:35:20] 2026-01-29 11:34:38,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 12:35:20] 2026-01-29 11:35:08,302 | INFO     | [monitor] cgroup control has ended
[2026-01-29 12:35:20] 2026-01-29 11:35:10,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716983105344)>', '<ExcThread(monitor, started 139716418594560)>']
[2026-01-29 12:35:20] 2026-01-29 11:35:10,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 12:35:20] 2026-01-29 11:35:10,568 | INFO     | [monitor] control thread has ended
[2026-01-29 12:35:20] 2026-01-29 11:35:15,091 | INFO     | all workflow threads have been joined
[2026-01-29 12:35:20] 2026-01-29 11:35:15,091 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 12:35:20] 2026-01-29 11:35:15,091 | INFO     | traces error code: 0
[2026-01-29 12:35:20] 2026-01-29 11:35:15,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 12:35:20] 2026-01-29 11:35:15,465 [wrapper] ==== pilot stdout END ====
[2026-01-29 12:35:20] 2026-01-29 11:35:15,560 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 12:35:20] 2026-01-29 11:35:15,660 [wrapper] pilotpid: 20344
[2026-01-29 12:35:20] 2026-01-29 11:35:15,745 [wrapper] Pilot exit status: 0
[2026-01-29 12:35:20] 2026-01-29 11:35:16,277 [wrapper] pandaids: 6986361643
[2026-01-29 12:35:20] 2026-01-29 11:35:17,210 [wrapper] cleanup supervisor_pilot 31734 20345
[2026-01-29 12:35:20] 2026-01-29 11:35:17,313 [wrapper] Test setup, not cleaning
[2026-01-29 12:35:20] 2026-01-29 11:35:17,398 [wrapper] apfmon messages muted
[2026-01-29 12:35:20] 2026-01-29 11:35:17,496 [wrapper] ==== wrapper stdout END ====
[2026-01-29 12:35:20] 2026-01-29 11:35:17,606 [wrapper] ==== wrapper stderr END ====
[2026-01-29 12:35:20]  *** Error codes and diagnostics ***
[2026-01-29 12:35:20]     "exeErrorCode": 0,
[2026-01-29 12:35:20]     "exeErrorDiag": "",
[2026-01-29 12:35:20]     "pilotErrorCode": 0,
[2026-01-29 12:35:20]     "pilotErrorDiag": "",
[2026-01-29 12:35:20]  *** Listing of results directory ***
[2026-01-29 12:35:20] total 731552
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc    584422 Jan 28 19:37 pilot3.tar.gz
[2026-01-29 12:35:20] -rwx------. 1 boinc boinc     36322 Jan 28 19:38 runpilot2-wrapper.sh
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc      5111 Jan 28 19:39 queuedata.json
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc       100 Jan 29 07:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 12:35:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan 29 07:53 run_atlas
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc       105 Jan 29 07:53 job.xml
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc      6392 Jan 29 07:53 init_data.xml
[2026-01-29 12:35:20] -rw-r--r--. 2 boinc boinc 536480672 Jan 29 07:53 EVNT.48317969._000057.pool.root.1
[2026-01-29 12:35:20] -rw-r--r--. 2 boinc boinc     15845 Jan 29 07:53 start_atlas.sh
[2026-01-29 12:35:20] drwxrwx--x. 2 boinc boinc        68 Jan 29 07:53 shared
[2026-01-29 12:35:20] -rw-r--r--. 2 boinc boinc    597765 Jan 29 07:53 input.tar.gz
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc         0 Jan 29 07:53 boinc_lockfile
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc      2514 Jan 29 07:53 pandaJob.out
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc       413 Jan 29 08:00 workernode_map.json
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc   1005755 Jan 29 08:00 agis_schedconf.cvmfs.json
[2026-01-29 12:35:20] drwx------. 5 boinc boinc      4096 Jan 29 08:00 pilot3
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc 203044890 Jan 29 12:32 HITS.48317971._002853.pool.root.1
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc       531 Jan 29 12:33 boinc_task_state.xml
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc      1010 Jan 29 12:33 memory_monitor_summary.json
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc   1516246 Jan 29 12:33 agis_ddmendpoints.agis.ALL.json
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc    523728 Jan 29 12:33 log.48317971._002853.job.log.tgz.1
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc      6318 Jan 29 12:34 heartbeat.json
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc        95 Jan 29 12:34 pilot_heartbeat.json
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc      8192 Jan 29 12:34 boinc_mmap_file
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc        28 Jan 29 12:34 wrapper_checkpoint.txt
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc      4953 Jan 29 12:35 pilotlog.txt
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc   2309193 Jan 29 12:35 log.48317971._002853.job.log.1
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc       357 Jan 29 12:35 output.list
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc       620 Jan 29 12:35 runtime_log
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc   2846720 Jan 29 12:35 result.tar.gz
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc      8832 Jan 29 12:35 runtime_log.err
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc       655 Jan 29 12:35 ke8LDmfbP58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJtGKDmZyWVpn.diag
[2026-01-29 12:35:20] -rw-r--r--. 1 boinc boinc     20706 Jan 29 12:35 stderr.txt
[2026-01-29 12:35:20] HITS file was successfully produced:
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc 203044890 Jan 29 12:32 shared/HITS.pool.root.1
[2026-01-29 12:35:20]  *** Contents of shared directory: ***
[2026-01-29 12:35:20] total 725576
[2026-01-29 12:35:20] -rw-r--r--. 2 boinc boinc 536480672 Jan 29 07:53 ATLAS.root_0
[2026-01-29 12:35:20] -rw-r--r--. 2 boinc boinc     15845 Jan 29 07:53 start_atlas.sh
[2026-01-29 12:35:20] -rw-r--r--. 2 boinc boinc    597765 Jan 29 07:53 input.tar.gz
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc 203044890 Jan 29 12:32 HITS.pool.root.1
[2026-01-29 12:35:20] -rw-------. 1 boinc boinc   2846720 Jan 29 12:35 result.tar.gz
12:35:21 (16274): run_atlas exited; CPU time 59223.466765
12:35:21 (16274): called boinc_finish(0)

</stderr_txt>
]]>

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