Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:01:59 (3380652): wrapper (7.7.26015): starting
13:01:59 (3380652): wrapper: running run_atlas (--nthreads 8)
[2026-01-28 13:01:59] Arguments: --nthreads 8
[2026-01-28 13:01:59] Threads: 8
[2026-01-28 13:01:59] Checking for CVMFS
[2026-01-28 13:01:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 13:01:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 13:01:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 13:01:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 13:01:59] 2.11.3.0 3753445 84526 213704 155626 2 196 44823895 45568000 10049 130560 0 423942392 99.771 303388712 19080 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-28 13:01:59] CVMFS is ok
[2026-01-28 13:01:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 13:01:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 13:01:59] Further information can be found at the LHC@home message board.
[2026-01-28 13:01:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 13:01:59] Checking for apptainer binary...
[2026-01-28 13:01:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 13:01:59] Running /usr/bin/apptainer --version
[2026-01-28 13:01:59] apptainer version 1.4.1-1.el9
[2026-01-28 13:02:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 13:02:00] wns0010.triumf.lcg
[2026-01-28 13:02:00] apptainer works
[2026-01-28 13:02:00] Set ATHENA_PROC_NUMBER=8
[2026-01-28 13:02:00] Set ATHENA_CORE_NUMBER=8
[2026-01-28 13:02:00] Starting ATLAS job with PandaID=6986150862
[2026-01-28 13:02:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 13:05:37]  *** The last 200 lines of the pilot log: ***
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | ..............................
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . Timing measurements:
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . get job = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . initial setup = 8 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . payload setup = 7 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . stage-in = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . payload execution = 21 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . stage-out = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | . log creation = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | ..............................
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6986150862/pilotlog.txt
[2026-01-28 13:05:37] 2026-01-28 21:05:03,615 | INFO     | monitor loop #56: job 0:6986150862 is in state 'failed'
[2026-01-28 13:05:37] 2026-01-28 21:05:03,616 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-28 13:05:37] 2026-01-28 21:05:03,625 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-28 13:05:37] - Log from pilotlog.txt -
[2026-01-28 13:05:37] 2026-01-28 21:05:03,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 13:05:37] 2026-01-28 21:05:03,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 13:05:37] 2026-01-28 21:05:03,591 | WARNING  | found no stored workdir sizes
[2026-01-28 13:05:37] 2026-01-28 21:05:03,591 | INFO     | will not add max space = 0 B to job metrics
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | WARNING  | wrong length of table data, x=[1769634165.0], y=[1521.0] (must be same and length>=4)
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | ..............................
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . Timing measurements:
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . get job = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . initial setup = 8 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . payload setup = 7 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . stage-in = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . payload execution = 21 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . stage-out = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | . log creation = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | ..............................
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6986150862/pilotlog.txt
[2026-01-28 13:05:37] 2026-01-28 21:05:03,615 | INFO     | monitor loop #56: job 0:6986150862 is in state 'failed'
[2026-01-28 13:05:37] 2026-01-28 21:05:03,616 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-28 13:05:37] 2026-01-28 21:05:03,625 | WARNING  | 
[2026-01-28 13:05:37] [begin log extracts]
[2026-01-28 13:05:37] - Log from pilotlog.txt -
[2026-01-28 13:05:37] 2026-01-28 21:05:03,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 13:05:37] 2026-01-28 21:05:03,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 13:05:37] 2026-01-28 21:05:03,591 | WARNING  | found no stored workdir sizes
[2026-01-28 13:05:37] 2026-01-28 21:05:03,591 | INFO     | will not add max space = 0 B to job metrics
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | WARNING  | wrong length of table data, x=[1769634165.0], y=[1521.0] (must be same and length>=4)
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | ..............................
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . Timing measurements:
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . get job = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . initial setup = 8 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . payload setup = 7 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . stage-in = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . payload execution = 21 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,592 | INFO     | . stage-out = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | . log creation = 0 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | ..............................
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-28 13:05:37] 2026-01-28 21:05:03,593 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6986150862/pilotlog.txt
[2026-01-28 13:05:37] 2026-01-28 21:05:03,615 | INFO     | monitor loop #56: job 0:6986150862 is in state 'failed'
[2026-01-28 13:05:37] 2026-01-28 21:05:03,616 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-28 13:05:37] [end log extracts]
[2026-01-28 13:05:37] 2026-01-28 21:05:03,625 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-28 13:05:37] 2026-01-28 21:05:03,626 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-28 13:05:37] 2026-01-28 21:05:03,979 | INFO     | 
[2026-01-28 13:05:37] 2026-01-28 21:05:03,979 | INFO     | job summary report
[2026-01-28 13:05:37] 2026-01-28 21:05:03,979 | INFO     | --------------------------------------------------
[2026-01-28 13:05:37] 2026-01-28 21:05:03,979 | INFO     | PanDA job id: 6986150862
[2026-01-28 13:05:37] 2026-01-28 21:05:03,979 | INFO     | task id: 48317931
[2026-01-28 13:05:37] 2026-01-28 21:05:03,979 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-28 13:02:56,197 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-28 13:05:37] 2026-01-28 21:05:03,979 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | pilot state: failed 
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | transexitcode: 65
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | exeerrorcode: 65
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | exitcode: 65
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | cpuconsumptiontime: 14 s
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | nevents: 0
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | neventsw: 0
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | pid: 3388847
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | pgrp: 3388847
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | corecount: 8
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | event service: False
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | sizes: {0: 2283084, 1: 2284199, 12: 2284199, 32: 2307592, 33: 2311884, 36: 2311940, 152: 2312234}
[2026-01-28 13:05:37] 2026-01-28 21:05:03,980 | INFO     | --------------------------------------------------
[2026-01-28 13:05:37] 2026-01-28 21:05:03,981 | INFO     | 
[2026-01-28 13:05:37] 2026-01-28 21:05:03,981 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-28 13:05:37] 2026-01-28 21:05:04,071 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,073 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 13:05:37] 2026-01-28 21:05:04,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,073 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 13:05:37] 2026-01-28 21:05:04,073 | INFO     | job 6986150862 has completed (purged errors)
[2026-01-28 13:05:37] 2026-01-28 21:05:04,073 | INFO     | overall cleanup function is called
[2026-01-28 13:05:37] 2026-01-28 21:05:05,080 | INFO     | --- collectZombieJob: --- 10, [3388847]
[2026-01-28 13:05:37] 2026-01-28 21:05:05,080 | INFO     | zombie collector waiting for pid 3388847
[2026-01-28 13:05:37] 2026-01-28 21:05:05,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 13:05:37] 2026-01-28 21:05:05,080 | INFO     | collected zombie processes
[2026-01-28 13:05:37] 2026-01-28 21:05:05,081 | INFO     | will attempt to kill all subprocesses of pid=3388847
[2026-01-28 13:05:37] 2026-01-28 21:05:05,353 | INFO     | process IDs to be killed: [3388847] (in reverse order)
[2026-01-28 13:05:37] 2026-01-28 21:05:05,404 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 13:05:37] 2026-01-28 21:05:05,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 13:05:37] 2026-01-28 21:05:05,410 | INFO     | did not find any defunct processes belonging to 3388847
[2026-01-28 13:05:37] 2026-01-28 21:05:05,413 | INFO     | did not find any defunct processes belonging to 3388847
[2026-01-28 13:05:37] 2026-01-28 21:05:05,414 | INFO     | ready for new job
[2026-01-28 13:05:37] 2026-01-28 21:05:05,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 13:05:37] 2026-01-28 21:05:05,415 | INFO     | **************************************
[2026-01-28 13:05:37] 2026-01-28 21:05:05,415 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 13:05:37] 2026-01-28 21:05:05,415 | INFO     | **************************************
[2026-01-28 13:05:37] 2026-01-28 21:05:05,415 | INFO     | 
[2026-01-28 13:05:37] 2026-01-28 21:05:05,416 | INFO     | architecture information:
[2026-01-28 13:05:37] 2026-01-28 21:05:05,417 | INFO     | executing command: cat /etc/os-release
[2026-01-28 13:05:37] 2026-01-28 21:05:05,426 | INFO     | cat /etc/os-release:
[2026-01-28 13:05:37] NAME="CentOS Linux"
[2026-01-28 13:05:37] VERSION="7 (Core)"
[2026-01-28 13:05:37] ID="centos"
[2026-01-28 13:05:37] ID_LIKE="rhel fedora"
[2026-01-28 13:05:37] VERSION_ID="7"
[2026-01-28 13:05:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 13:05:37] ANSI_COLOR="0;31"
[2026-01-28 13:05:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 13:05:37] HOME_URL="https://www.centos.org/"
[2026-01-28 13:05:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 13:05:37] 
[2026-01-28 13:05:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 13:05:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 13:05:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 13:05:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 13:05:37] 
[2026-01-28 13:05:37] 2026-01-28 21:05:05,427 | INFO     | **************************************
[2026-01-28 13:05:37] 2026-01-28 21:05:05,930 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-28 13:05:37] 2026-01-28 21:05:05,954 | INFO     | sufficient remaining disk space (1332404551680 B)
[2026-01-28 13:05:37] 2026-01-28 21:05:05,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 13:05:37] 2026-01-28 21:05:05,955 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 13:05:37] 2026-01-28 21:05:05,955 | INFO     | update_server=False
[2026-01-28 13:05:37] 2026-01-28 21:05:05,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 13:05:37] 2026-01-28 21:05:05,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 13:05:37] 2026-01-28 21:05:05,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 13:05:37] 2026-01-28 21:05:06,020 | INFO     | all job control threads have been joined
[2026-01-28 13:05:37] 2026-01-28 21:05:06,122 | INFO     | all data control threads have been joined
[2026-01-28 13:05:37] 2026-01-28 21:05:06,125 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-28 13:05:37] 2026-01-28 21:05:06,125 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-28 13:05:37] 2026-01-28 21:05:06,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 13:05:37] 2026-01-28 21:05:06,125 | INFO     | will abort loop
[2026-01-28 13:05:37] 2026-01-28 21:05:06,185 | INFO     | all payload control threads have been joined
[2026-01-28 13:05:37] 2026-01-28 21:05:06,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 13:05:37] 2026-01-28 21:05:06,972 | INFO     | [job] retrieve thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:06,979 | INFO     | [job] queue monitor thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,026 | INFO     | [job] control thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,128 | INFO     | [data] control thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,131 | INFO     | [job] job monitor thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,191 | INFO     | [payload] control thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,295 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,417 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,454 | INFO     | [job] validate thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,534 | INFO     | [payload] failed_post thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,570 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,838 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,905 | INFO     | [data] copytool_in thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:07,976 | INFO     | [data] copytool_out thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:08,410 | INFO     | [payload] validate_post thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:10,502 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 13:05:37] 2026-01-28 21:05:20,235 | INFO     | [monitor] cgroup control has ended
[2026-01-28 13:05:37] 2026-01-28 21:05:21,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492228462400)>', '<ExcThread(monitor, started 140491819554560)>']
[2026-01-28 13:05:37] 2026-01-28 21:05:26,267 | INFO     | all workflow threads have been joined
[2026-01-28 13:05:37] 2026-01-28 21:05:26,267 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 13:05:37] 2026-01-28 21:05:26,267 | INFO     | traces error code: 0
[2026-01-28 13:05:37] 2026-01-28 21:05:26,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 13:05:37] 2026-01-28 21:05:37,108 | INFO     | PID=3384331 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 13:05:37] 2026-01-28 21:05:37,125 | INFO     | .. there are 12 such processes running
[2026-01-28 13:05:37] 2026-01-28 21:05:37,126 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 13:05:37] 2026-01-28 21:05:37,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 13:05:37] 2026-01-28 21:05:37,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 13:05:37] 2026-01-28 21:05:37,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 13:05:37] 2026-01-28 21:05:37,126 | INFO     | [monitor] control thread has ended
[2026-01-28 13:05:37] 2026-01-28 21:05:37,504 [wrapper] ==== pilot stdout END ====
[2026-01-28 13:05:37] 2026-01-28 21:05:37,526 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 13:05:37] 2026-01-28 21:05:37,563 [wrapper] pilotpid: 3384331
[2026-01-28 13:05:37] 2026-01-28 21:05:37,617 [wrapper] Pilot exit status: 0
[2026-01-28 13:05:37] 2026-01-28 21:05:37,699 [wrapper] pandaids: 6986150862
[2026-01-28 13:05:37] 2026-01-28 21:05:37,727 [wrapper] cleanup supervisor_pilot 3384337 3384332
[2026-01-28 13:05:37] 2026-01-28 21:05:37,729 [wrapper] Test setup, not cleaning
[2026-01-28 13:05:37] 2026-01-28 21:05:37,731 [wrapper] apfmon messages muted
[2026-01-28 13:05:37] 2026-01-28 21:05:37,733 [wrapper] ==== wrapper stdout END ====
[2026-01-28 13:05:37] 2026-01-28 21:05:37,735 [wrapper] ==== wrapper stderr END ====
[2026-01-28 13:05:37]  *** Error codes and diagnostics ***
[2026-01-28 13:05:37]     "exeErrorCode": 65,
[2026-01-28 13:05:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-28 13:05:37]     "pilotErrorCode": 1305,
[2026-01-28 13:05:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-28 13:05:37]  *** Listing of results directory ***
[2026-01-28 13:05:37] total 488084
[2026-01-28 13:05:37] -rwx------. 1 boinc boinc     36322 Jan 28 09:07 runpilot2-wrapper.sh
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc      5111 Jan 28 09:08 queuedata.json
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc    584422 Jan 28 09:08 pilot3.tar.gz
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc       100 Jan 28 13:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 13:05:37] -rwxr-xr-x. 1 boinc boinc      7986 Jan 28 13:01 run_atlas
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc       105 Jan 28 13:01 job.xml
[2026-01-28 13:05:37] -rw-r--r--. 2 boinc boinc 495658668 Jan 28 13:01 EVNT.48317929._000050.pool.root.1
[2026-01-28 13:05:37] drwxrwx--x. 2 boinc boinc      4096 Jan 28 13:01 shared
[2026-01-28 13:05:37] -rw-r--r--. 2 boinc boinc    597753 Jan 28 13:01 input.tar.gz
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc      6445 Jan 28 13:01 init_data.xml
[2026-01-28 13:05:37] -rw-r--r--. 2 boinc boinc     15845 Jan 28 13:01 start_atlas.sh
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc         0 Jan 28 13:01 boinc_lockfile
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc      2507 Jan 28 13:02 pandaJob.out
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc   1005755 Jan 28 13:02 agis_schedconf.cvmfs.json
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc   1516246 Jan 28 13:02 agis_ddmendpoints.agis.ALL.json
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc       435 Jan 28 13:02 workernode_map.json
[2026-01-28 13:05:37] drwx------. 5 boinc boinc      4096 Jan 28 13:02 pilot3
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc       968 Jan 28 13:03 memory_monitor_summary.json
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc       522 Jan 28 13:03 boinc_task_state.xml
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc     20177 Jan 28 13:03 log.48317931._005294.job.log.tgz.1
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc      7005 Jan 28 13:05 heartbeat.json
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc      8192 Jan 28 13:05 boinc_mmap_file
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc        22 Jan 28 13:05 wrapper_checkpoint.txt
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc        95 Jan 28 13:05 pilot_heartbeat.json
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc       823 Jan 28 13:05 pilotlog.txt
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc     82012 Jan 28 13:05 log.48317931._005294.job.log.1
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc       188 Jan 28 13:05 output.list
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc       620 Jan 28 13:05 runtime_log
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc    122880 Jan 28 13:05 result.tar.gz
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc      8633 Jan 28 13:05 runtime_log.err
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc       646 Jan 28 13:05 oalMDmFCO58n9Rq4apOajLDm4fhM0noT9bVooX4SDmnfGKDmWQPQmm.diag
[2026-01-28 13:05:37] -rw-r--r--. 1 boinc boinc     21762 Jan 28 13:05 stderr.txt
[2026-01-28 13:05:37] No HITS result produced
[2026-01-28 13:05:37]  *** Contents of shared directory: ***
[2026-01-28 13:05:37] total 484768
[2026-01-28 13:05:37] -rw-r--r--. 2 boinc boinc 495658668 Jan 28 13:01 ATLAS.root_0
[2026-01-28 13:05:37] -rw-r--r--. 2 boinc boinc    597753 Jan 28 13:01 input.tar.gz
[2026-01-28 13:05:37] -rw-r--r--. 2 boinc boinc     15845 Jan 28 13:01 start_atlas.sh
[2026-01-28 13:05:37] -rw-------. 1 boinc boinc    122880 Jan 28 13:05 result.tar.gz
13:05:39 (3380652): run_atlas exited; CPU time 19.136921
13:05:39 (3380652): called boinc_finish(0)

</stderr_txt>
]]>

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