Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:06:53 (21446): wrapper (7.7.26015): starting
17:06:53 (21446): wrapper: running run_atlas (--nthreads 8)
[2026-01-28 17:06:53] Arguments: --nthreads 8
[2026-01-28 17:06:53] Threads: 8
[2026-01-28 17:06:53] Checking for CVMFS
[2026-01-28 17:06:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 17:06:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 17:06:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 17:06:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 17:06:56] 2.11.2.0 29086 62993 134068 155622 3 13 14177083 25165824 899 130560 0 20247980 99.819 15226018 2607 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-28 17:06:56] CVMFS is ok
[2026-01-28 17:06:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 17:06:56] Checking for apptainer binary...
[2026-01-28 17:06:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 17:06:56] Running /usr/bin/apptainer --version
[2026-01-28 17:06:56] apptainer version 1.3.2-1.el7
[2026-01-28 17:06:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 17:07:16] cg-vwn413.simple-grid.lan
[2026-01-28 17:07:16] apptainer works
[2026-01-28 17:07:17] Set ATHENA_PROC_NUMBER=8
[2026-01-28 17:07:17] Set ATHENA_CORE_NUMBER=8
[2026-01-28 17:07:17] Starting ATLAS job with PandaID=6985348712
[2026-01-28 17:07:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 21:25:48]  *** The last 200 lines of the pilot log: ***
[2026-01-28 21:25:48] 2026-01-28 20:25:01,615 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6985348712/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 21:25:48] 2026-01-28 20:25:01,616 | INFO     | extracted standard info from prmon json
[2026-01-28 21:25:48] 2026-01-28 20:25:01,616 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 21:25:48] 2026-01-28 20:25:01,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 21:25:48] 2026-01-28 20:25:01,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 21:25:48] 2026-01-28 20:25:01,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 21:25:48] 2026-01-28 20:25:01,621 | INFO     | fitting pss+swap vs Time
[2026-01-28 21:25:48] 2026-01-28 20:25:01,622 | INFO     | sum of square deviations: 4394577280.5
[2026-01-28 21:25:48] 2026-01-28 20:25:01,624 | INFO     | sum of deviations: 152827575764.50006
[2026-01-28 21:25:48] 2026-01-28 20:25:01,624 | INFO     | mean x: 1769624478.5
[2026-01-28 21:25:48] 2026-01-28 20:25:01,624 | INFO     | mean y: 2662903.3181818184
[2026-01-28 21:25:48] 2026-01-28 20:25:01,624 | INFO     | intersect: -61538505177.33554
[2026-01-28 21:25:48] 2026-01-28 20:25:01,625 | INFO     | chi2: 9.376003951080909
[2026-01-28 21:25:48] 2026-01-28 20:25:01,625 | INFO     | sum of square deviations: 4127772278.0
[2026-01-28 21:25:48] 2026-01-28 20:25:01,627 | INFO     | sum of deviations: 175110105609.00003
[2026-01-28 21:25:48] 2026-01-28 20:25:01,628 | INFO     | mean x: 1769624326.0
[2026-01-28 21:25:48] 2026-01-28 20:25:01,628 | INFO     | mean y: 2675483.493670886
[2026-01-28 21:25:48] 2026-01-28 20:25:01,628 | INFO     | intersect: -75069077933.16017
[2026-01-28 21:25:48] 2026-01-28 20:25:01,628 | INFO     | chi2: 8.574628354315777
[2026-01-28 21:25:48] 2026-01-28 20:25:01,628 | INFO     | current chi2=8.574628354315777 (change=8.547091073620393 %)
[2026-01-28 21:25:48] 2026-01-28 20:25:01,628 | INFO     | right removable region: 236
[2026-01-28 21:25:48] 2026-01-28 20:25:01,629 | INFO     | sum of square deviations: 4127772278.0
[2026-01-28 21:25:48] 2026-01-28 20:25:01,635 | INFO     | sum of deviations: 59641259099.00001
[2026-01-28 21:25:48] 2026-01-28 20:25:01,635 | INFO     | mean x: 1769624631.0
[2026-01-28 21:25:48] 2026-01-28 20:25:01,635 | INFO     | mean y: 2716139.0717299576
[2026-01-28 21:25:48] 2026-01-28 20:25:01,636 | INFO     | intersect: -25566194647.979027
[2026-01-28 21:25:48] 2026-01-28 20:25:01,636 | INFO     | chi2: 4.239656005659141
[2026-01-28 21:25:48] 2026-01-28 20:25:01,636 | INFO     | current chi2=4.239656005659141 (change=54.7818449333058 %)
[2026-01-28 21:25:48] 2026-01-28 20:25:01,637 | INFO     | sum of square deviations: 3871990738.0
[2026-01-28 21:25:48] 2026-01-28 20:25:01,639 | INFO     | sum of deviations: -13543086074.5
[2026-01-28 21:25:48] 2026-01-28 20:25:01,639 | INFO     | mean x: 1769624783.5
[2026-01-28 21:25:48] 2026-01-28 20:25:01,639 | INFO     | mean y: 2759722.599137931
[2026-01-28 21:25:48] 2026-01-28 20:25:01,639 | INFO     | intersect: 6192387328.704462
[2026-01-28 21:25:48] 2026-01-28 20:25:01,640 | INFO     | chi2: 1.3074238183101632
[2026-01-28 21:25:48] 2026-01-28 20:25:01,640 | INFO     | current chi2=1.3074238183101632 (change=69.1620306797297 %)
[2026-01-28 21:25:48] 2026-01-28 20:25:01,640 | INFO     | sum of square deviations: 3627000098.0
[2026-01-28 21:25:48] 2026-01-28 20:25:01,642 | INFO     | sum of deviations: -34221445544.0
[2026-01-28 21:25:48] 2026-01-28 20:25:01,642 | INFO     | mean x: 1769624936.0
[2026-01-28 21:25:48] 2026-01-28 20:25:01,642 | INFO     | mean y: 2772533.308370044
[2026-01-28 21:25:48] 2026-01-28 20:25:01,642 | INFO     | intersect: 16699525150.99426
[2026-01-28 21:25:48] 2026-01-28 20:25:01,643 | INFO     | chi2: 1.025498995978017
[2026-01-28 21:25:48] 2026-01-28 20:25:01,643 | INFO     | current chi2=1.025498995978017 (change=21.56338429695523 %)
[2026-01-28 21:25:48] 2026-01-28 20:25:01,643 | INFO     | left removable region: 30
[2026-01-28 21:25:48] 2026-01-28 20:25:01,644 | INFO     | sum of square deviations: 2710627567.5
[2026-01-28 21:25:48] 2026-01-28 20:25:01,645 | INFO     | sum of deviations: -14345816825.0
[2026-01-28 21:25:48] 2026-01-28 20:25:01,645 | INFO     | mean x: 1769625210.5
[2026-01-28 21:25:48] 2026-01-28 20:25:01,646 | INFO     | mean y: 2794307.475728155
[2026-01-28 21:25:48] 2026-01-28 20:25:01,646 | INFO     | intersect: 9368418498.389248
[2026-01-28 21:25:48] 2026-01-28 20:25:01,646 | INFO     | chi2: 0.11997059497970995
[2026-01-28 21:25:48] 2026-01-28 20:25:01,646 | INFO     | current memory leak: -5.29 B/s (using 206 data points, chi2=0.12)
[2026-01-28 21:25:48] 2026-01-28 20:25:01,647 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-28 21:25:48] 2026-01-28 20:25:01,647 | INFO     | ..............................
[2026-01-28 21:25:48] 2026-01-28 20:25:01,647 | INFO     | . Timing measurements:
[2026-01-28 21:25:48] 2026-01-28 20:25:01,647 | INFO     | . get job = 0 s
[2026-01-28 21:25:48] 2026-01-28 20:25:01,647 | INFO     | . initial setup = 123 s
[2026-01-28 21:25:48] 2026-01-28 20:25:01,648 | INFO     | . payload setup = 143 s
[2026-01-28 21:25:48] 2026-01-28 20:25:01,648 | INFO     | . stage-in = 0 s
[2026-01-28 21:25:48] 2026-01-28 20:25:01,648 | INFO     | . payload execution = 14891 s
[2026-01-28 21:25:48] 2026-01-28 20:25:01,648 | INFO     | . stage-out = 3 s
[2026-01-28 21:25:48] 2026-01-28 20:25:01,648 | INFO     | . log creation = 1 s
[2026-01-28 21:25:48] 2026-01-28 20:25:01,648 | INFO     | ..............................
[2026-01-28 21:25:48] 2026-01-28 20:25:01,928 | INFO     | time since job start (15049s) is within the limit (349056.0s)
[2026-01-28 21:25:48] 2026-01-28 20:25:02,009 | INFO     | 
[2026-01-28 21:25:48] 2026-01-28 20:25:02,010 | INFO     | job summary report
[2026-01-28 21:25:48] 2026-01-28 20:25:02,010 | INFO     | --------------------------------------------------
[2026-01-28 21:25:48] 2026-01-28 20:25:02,010 | INFO     | PanDA job id: 6985348712
[2026-01-28 21:25:48] 2026-01-28 20:25:02,010 | INFO     | task id: 48317872
[2026-01-28 21:25:48] 2026-01-28 20:25:02,010 | INFO     | errors: (none)
[2026-01-28 21:25:48] 2026-01-28 20:25:02,010 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 21:25:48] 2026-01-28 20:25:02,010 | INFO     | pilot state: finished 
[2026-01-28 21:25:48] 2026-01-28 20:25:02,010 | INFO     | transexitcode: 0
[2026-01-28 21:25:48] 2026-01-28 20:25:02,011 | INFO     | exeerrorcode: 0
[2026-01-28 21:25:48] 2026-01-28 20:25:02,011 | INFO     | exeerrordiag: 
[2026-01-28 21:25:48] 2026-01-28 20:25:02,011 | INFO     | exitcode: 0
[2026-01-28 21:25:48] 2026-01-28 20:25:02,011 | INFO     | exitmsg: OK
[2026-01-28 21:25:48] 2026-01-28 20:25:02,011 | INFO     | cpuconsumptiontime: 55640 s
[2026-01-28 21:25:48] 2026-01-28 20:25:02,011 | INFO     | nevents: 400
[2026-01-28 21:25:48] 2026-01-28 20:25:02,011 | INFO     | neventsw: 0
[2026-01-28 21:25:48] 2026-01-28 20:25:02,011 | INFO     | pid: 29906
[2026-01-28 21:25:48] 2026-01-28 20:25:02,011 | INFO     | pgrp: 29906
[2026-01-28 21:25:48] 2026-01-28 20:25:02,012 | INFO     | corecount: 8
[2026-01-28 21:25:48] 2026-01-28 20:25:02,012 | INFO     | event service: False
[2026-01-28 21:25:48] 2026-01-28 20:25:02,012 | INFO     | sizes: {0: 2283144, 1: 2284263, 2: 2284263, 15039: 2315297, 15043: 2324297, 15045: 2324353, 15047: 2324675}
[2026-01-28 21:25:48] 2026-01-28 20:25:02,012 | INFO     | --------------------------------------------------
[2026-01-28 21:25:48] 2026-01-28 20:25:02,012 | INFO     | 
[2026-01-28 21:25:48] 2026-01-28 20:25:02,012 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-28 21:25:48] 2026-01-28 20:25:02,594 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,594 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,594 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,594 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,595 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,595 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,595 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,595 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,595 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,596 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 21:25:48] 2026-01-28 20:25:02,596 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,596 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 21:25:48] 2026-01-28 20:25:02,596 | INFO     | job 6985348712 has completed (purged errors)
[2026-01-28 21:25:48] 2026-01-28 20:25:02,596 | INFO     | overall cleanup function is called
[2026-01-28 21:25:48] 2026-01-28 20:25:03,610 | INFO     | --- collectZombieJob: --- 10, [29906]
[2026-01-28 21:25:48] 2026-01-28 20:25:03,611 | INFO     | zombie collector waiting for pid 29906
[2026-01-28 21:25:48] 2026-01-28 20:25:03,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 21:25:48] 2026-01-28 20:25:03,611 | INFO     | collected zombie processes
[2026-01-28 21:25:48] 2026-01-28 20:25:03,611 | INFO     | will attempt to kill all subprocesses of pid=29906
[2026-01-28 21:25:48] 2026-01-28 20:25:03,701 | INFO     | process IDs to be killed: [29906] (in reverse order)
[2026-01-28 21:25:48] 2026-01-28 20:25:04,694 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 21:25:48] 2026-01-28 20:25:04,694 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 21:25:48] 2026-01-28 20:25:04,697 | INFO     | did not find any defunct processes belonging to 29906
[2026-01-28 21:25:48] 2026-01-28 20:25:04,698 | INFO     | did not find any defunct processes belonging to 29906
[2026-01-28 21:25:48] 2026-01-28 20:25:04,699 | INFO     | ready for new job
[2026-01-28 21:25:48] 2026-01-28 20:25:04,699 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 21:25:48] 2026-01-28 20:25:04,701 | INFO     | **************************************
[2026-01-28 21:25:48] 2026-01-28 20:25:04,701 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 21:25:48] 2026-01-28 20:25:04,701 | INFO     | **************************************
[2026-01-28 21:25:48] 2026-01-28 20:25:04,701 | INFO     | 
[2026-01-28 21:25:48] 2026-01-28 20:25:04,702 | INFO     | pilot is running in a VM
[2026-01-28 21:25:48] 2026-01-28 20:25:04,702 | INFO     | architecture information:
[2026-01-28 21:25:48] 2026-01-28 20:25:04,711 | INFO     | executing command: cat /etc/os-release
[2026-01-28 21:25:48] 2026-01-28 20:25:04,909 | INFO     | cat /etc/os-release:
[2026-01-28 21:25:48] NAME="CentOS Linux"
[2026-01-28 21:25:48] VERSION="7 (Core)"
[2026-01-28 21:25:48] ID="centos"
[2026-01-28 21:25:48] ID_LIKE="rhel fedora"
[2026-01-28 21:25:48] VERSION_ID="7"
[2026-01-28 21:25:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 21:25:48] ANSI_COLOR="0;31"
[2026-01-28 21:25:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 21:25:48] HOME_URL="https://www.centos.org/"
[2026-01-28 21:25:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 21:25:48] 
[2026-01-28 21:25:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 21:25:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 21:25:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 21:25:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 21:25:48] 
[2026-01-28 21:25:48] 2026-01-28 20:25:04,909 | INFO     | **************************************
[2026-01-28 21:25:48] 2026-01-28 20:25:05,413 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-28 21:25:48] 2026-01-28 20:25:05,679 | INFO     | sufficient remaining disk space (494302920704 B)
[2026-01-28 21:25:48] 2026-01-28 20:25:05,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 21:25:48] 2026-01-28 20:25:05,680 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 21:25:48] 2026-01-28 20:25:05,680 | INFO     | update_server=False
[2026-01-28 21:25:48] 2026-01-28 20:25:05,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 21:25:48] 2026-01-28 20:25:05,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 21:25:48] 2026-01-28 20:25:05,870 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-28 21:25:48] 2026-01-28 20:25:05,871 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-28 21:25:48] 2026-01-28 20:25:05,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 21:25:48] 2026-01-28 20:25:05,871 | INFO     | will abort loop
[2026-01-28 21:25:48] 2026-01-28 20:25:05,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 21:25:48] 2026-01-28 20:25:06,477 | INFO     | all payload control threads have been joined
[2026-01-28 21:25:48] 2026-01-28 20:25:06,637 | INFO     | all data control threads have been joined
[2026-01-28 21:25:48] 2026-01-28 20:25:06,686 | INFO     | [job] retrieve thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:06,716 | INFO     | all job control threads have been joined
[2026-01-28 21:25:48] 2026-01-28 20:25:06,768 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:06,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 21:25:48] 2026-01-28 20:25:06,876 | INFO     | [job] job monitor thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:06,975 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:07,416 | INFO     | [payload] failed_post thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:07,429 | INFO     | [job] validate thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:07,442 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:07,483 | INFO     | [payload] control thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:07,643 | INFO     | [data] control thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:07,656 | INFO     | [data] copytool_in thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:07,722 | INFO     | [job] control thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:07,726 | INFO     | [data] copytool_out thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:07,744 | INFO     | [payload] validate_post thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:07,802 | INFO     | [job] queue monitor thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:08,062 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:10,004 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 21:25:48] 2026-01-28 20:25:35,049 | INFO     | PID=25430 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-28 21:25:48] 2026-01-28 20:25:35,049 | INFO     | .. there are 2 such processes running
[2026-01-28 21:25:48] 2026-01-28 20:25:35,050 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 21:25:48] 2026-01-28 20:25:35,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 21:25:48] 2026-01-28 20:25:35,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 21:25:48] 2026-01-28 20:25:37,262 | INFO     | [monitor] cgroup control has ended
[2026-01-28 21:25:48] 2026-01-28 20:25:37,994 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698186057536)>', '<ExcThread(monitor, started 139697628112640)>']
[2026-01-28 21:25:48] 2026-01-28 20:25:38,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 21:25:48] 2026-01-28 20:25:38,069 | INFO     | [monitor] control thread has ended
[2026-01-28 21:25:48] 2026-01-28 20:25:43,020 | INFO     | all workflow threads have been joined
[2026-01-28 21:25:48] 2026-01-28 20:25:43,021 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 21:25:48] 2026-01-28 20:25:43,021 | INFO     | traces error code: 0
[2026-01-28 21:25:48] 2026-01-28 20:25:43,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 21:25:48] 2026-01-28 20:25:43,548 [wrapper] ==== pilot stdout END ====
[2026-01-28 21:25:48] 2026-01-28 20:25:43,656 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 21:25:48] 2026-01-28 20:25:43,769 [wrapper] pilotpid: 25430
[2026-01-28 21:25:48] 2026-01-28 20:25:43,878 [wrapper] Pilot exit status: 0
[2026-01-28 21:25:48] 2026-01-28 20:25:44,286 [wrapper] pandaids: 6985348712
[2026-01-28 21:25:48] 2026-01-28 20:25:45,417 [wrapper] cleanup supervisor_pilot  3700 25431
[2026-01-28 21:25:48] 2026-01-28 20:25:45,483 [wrapper] Test setup, not cleaning
[2026-01-28 21:25:48] 2026-01-28 20:25:45,571 [wrapper] apfmon messages muted
[2026-01-28 21:25:48] 2026-01-28 20:25:45,665 [wrapper] ==== wrapper stdout END ====
[2026-01-28 21:25:48] 2026-01-28 20:25:45,719 [wrapper] ==== wrapper stderr END ====
[2026-01-28 21:25:48]  *** Error codes and diagnostics ***
[2026-01-28 21:25:48]     "exeErrorCode": 0,
[2026-01-28 21:25:48]     "exeErrorDiag": "",
[2026-01-28 21:25:48]     "pilotErrorCode": 0,
[2026-01-28 21:25:48]     "pilotErrorDiag": "",
[2026-01-28 21:25:48]  *** Listing of results directory ***
[2026-01-28 21:25:48] total 664548
[2026-01-28 21:25:48] -rwx------. 1 boinc boinc     36322 Jan 28 13:28 runpilot2-wrapper.sh
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc    584422 Jan 28 13:33 pilot3.tar.gz
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc      5111 Jan 28 13:35 queuedata.json
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc       100 Jan 28 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 21:25:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan 28 17:06 run_atlas
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc       105 Jan 28 17:06 job.xml
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc      6392 Jan 28 17:06 init_data.xml
[2026-01-28 21:25:48] -rw-r--r--. 2 boinc boinc 487782154 Jan 28 17:06 EVNT.48317869._000108.pool.root.1
[2026-01-28 21:25:48] -rw-r--r--. 2 boinc boinc     15845 Jan 28 17:06 start_atlas.sh
[2026-01-28 21:25:48] drwxrwx--x. 2 boinc boinc        68 Jan 28 17:06 shared
[2026-01-28 21:25:48] -rw-r--r--. 2 boinc boinc    597758 Jan 28 17:06 input.tar.gz
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc         0 Jan 28 17:06 boinc_lockfile
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc      2515 Jan 28 17:07 pandaJob.out
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc       415 Jan 28 17:14 workernode_map.json
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc   1005192 Jan 28 17:14 agis_schedconf.cvmfs.json
[2026-01-28 21:25:48] drwx------. 5 boinc boinc      4096 Jan 28 17:14 pilot3
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc 183559622 Jan 28 21:23 HITS.48317872._005397.pool.root.1
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc       532 Jan 28 21:24 boinc_task_state.xml
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc      1010 Jan 28 21:24 memory_monitor_summary.json
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc   1516246 Jan 28 21:24 agis_ddmendpoints.agis.ALL.json
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc    488024 Jan 28 21:24 log.48317872._005397.job.log.tgz.1
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc      6316 Jan 28 21:25 heartbeat.json
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc        95 Jan 28 21:25 pilot_heartbeat.json
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc      5067 Jan 28 21:25 pilotlog.txt
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc      8192 Jan 28 21:25 boinc_mmap_file
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc        28 Jan 28 21:25 wrapper_checkpoint.txt
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc   2122630 Jan 28 21:25 log.48317872._005397.job.log.1
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc       357 Jan 28 21:25 output.list
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc       620 Jan 28 21:25 runtime_log
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc   2631680 Jan 28 21:25 result.tar.gz
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc       655 Jan 28 21:25 ShuMDm0pJ58n9Rq4apOajLDm4fhM0noT9bVooX4SDmHvFKDmI8eiUo.diag
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc      8832 Jan 28 21:25 runtime_log.err
[2026-01-28 21:25:48] -rw-r--r--. 1 boinc boinc     20718 Jan 28 21:25 stderr.txt
[2026-01-28 21:25:48] HITS file was successfully produced:
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc 183559622 Jan 28 21:23 shared/HITS.pool.root.1
[2026-01-28 21:25:48]  *** Contents of shared directory: ***
[2026-01-28 21:25:48] total 658784
[2026-01-28 21:25:48] -rw-r--r--. 2 boinc boinc 487782154 Jan 28 17:06 ATLAS.root_0
[2026-01-28 21:25:48] -rw-r--r--. 2 boinc boinc     15845 Jan 28 17:06 start_atlas.sh
[2026-01-28 21:25:48] -rw-r--r--. 2 boinc boinc    597758 Jan 28 17:06 input.tar.gz
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc 183559622 Jan 28 21:23 HITS.pool.root.1
[2026-01-28 21:25:48] -rw-------. 1 boinc boinc   2631680 Jan 28 21:25 result.tar.gz
21:25:50 (21446): run_atlas exited; CPU time 55798.584260
21:25:50 (21446): called boinc_finish(0)

</stderr_txt>
]]>

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