Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:01:17 (17328): wrapper (7.7.26015): starting
11:01:17 (17328): wrapper: running run_atlas (--nthreads 8)
[2026-01-28 11:01:17] Arguments: --nthreads 8
[2026-01-28 11:01:17] Threads: 8
[2026-01-28 11:01:17] Checking for CVMFS
[2026-01-28 11:01:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 11:01:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 11:01:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 11:01:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 11:01:19] 2.11.2.0 2933 37364 86492 155622 0 188 18017118 20275200 1 130560 0 10324942 99.686 3960861 31643 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-28 11:01:19] CVMFS is ok
[2026-01-28 11:01:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 11:01:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 11:01:19] Further information can be found at the LHC@home message board.
[2026-01-28 11:01:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 11:01:19] Checking for apptainer binary...
[2026-01-28 11:01:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 11:01:19] Running /usr/bin/apptainer --version
[2026-01-28 11:01:19] apptainer version 1.3.2-1.el7
[2026-01-28 11:01:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 11:01:20] c-115-2.aglt2.org
[2026-01-28 11:01:20] apptainer works
[2026-01-28 11:01:20] Set ATHENA_PROC_NUMBER=8
[2026-01-28 11:01:20] Set ATHENA_CORE_NUMBER=8
[2026-01-28 11:01:20] Starting ATLAS job with PandaID=6985347651
[2026-01-28 11:01:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:31:58 (28260): wrapper (7.7.26015): starting
12:31:58 (28260): wrapper: running run_atlas (--nthreads 8)
[2026-01-28 12:31:58] Arguments: --nthreads 8
[2026-01-28 12:31:58] Threads: 8
[2026-01-28 12:31:58] This job has been restarted, cleaning up previous attempt
[2026-01-28 12:31:58] Checking for CVMFS
[2026-01-28 12:31:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 12:31:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 12:31:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 12:31:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 12:31:58] 2.11.2.0 2933 37454 90148 155622 1 188 18135123 20275200 1 130560 0 10376415 99.688 3963385 31646 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-28 12:31:58] CVMFS is ok
[2026-01-28 12:31:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 12:31:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 12:31:58] Further information can be found at the LHC@home message board.
[2026-01-28 12:31:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 12:31:58] Checking for apptainer binary...
[2026-01-28 12:31:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 12:31:58] Running /usr/bin/apptainer --version
[2026-01-28 12:31:59] apptainer version 1.3.2-1.el7
[2026-01-28 12:31:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 12:32:00] c-115-2.aglt2.org
[2026-01-28 12:32:00] apptainer works
[2026-01-28 12:32:00] Set ATHENA_PROC_NUMBER=8
[2026-01-28 12:32:00] Set ATHENA_CORE_NUMBER=8
[2026-01-28 12:32:00] Starting ATLAS job with PandaID=6985347651
[2026-01-28 12:32:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 14:26:33]  *** The last 200 lines of the pilot log: ***
[2026-01-28 14:26:33] 2026-01-28 19:25:45,269 | INFO     | this job has now completed (state=finished)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,269 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,269 | INFO     | log transfer has been attempted: DONE
[2026-01-28 14:26:33] 2026-01-28 19:25:45,269 | INFO     | job 6985347651 has finished - writing final server update
[2026-01-28 14:26:33] 2026-01-28 19:25:45,269 | INFO     | total number of processed events: 400 (read)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,271 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6985347651/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,271 | INFO     | extracted standard info from prmon json
[2026-01-28 14:26:33] 2026-01-28 19:25:45,272 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 14:26:33] 2026-01-28 19:25:45,272 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 14:26:33] 2026-01-28 19:25:45,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 14:26:33] 2026-01-28 19:25:45,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 14:26:33] 2026-01-28 19:25:45,274 | INFO     | fitting pss+swap vs Time
[2026-01-28 14:26:33] 2026-01-28 19:25:45,274 | INFO     | sum of square deviations: 435610028.0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,275 | INFO     | sum of deviations: 16147422178.999998
[2026-01-28 14:26:33] 2026-01-28 19:25:45,275 | INFO     | mean x: 1769624946.5
[2026-01-28 14:26:33] 2026-01-28 19:25:45,275 | INFO     | mean y: 2744619.410714286
[2026-01-28 14:26:33] 2026-01-28 19:25:45,275 | INFO     | intersect: -65594645874.1474
[2026-01-28 14:26:33] 2026-01-28 19:25:45,276 | INFO     | chi2: 2.1677232982399612
[2026-01-28 14:26:33] 2026-01-28 19:25:45,276 | INFO     | sum of square deviations: 379832238.0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,276 | INFO     | sum of deviations: 23215618875.999996
[2026-01-28 14:26:33] 2026-01-28 19:25:45,276 | INFO     | mean x: 1769624794.0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,277 | INFO     | mean y: 2763142.551401869
[2026-01-28 14:26:33] 2026-01-28 19:25:45,277 | INFO     | intersect: -108157973785.27094
[2026-01-28 14:26:33] 2026-01-28 19:25:45,277 | INFO     | chi2: 1.4315335075109699
[2026-01-28 14:26:33] 2026-01-28 19:25:45,277 | INFO     | current chi2=1.4315335075109699 (change=33.96142816413541 %)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,277 | INFO     | sum of square deviations: 329031285.5
[2026-01-28 14:26:33] 2026-01-28 19:25:45,278 | INFO     | sum of deviations: 22023179133.500004
[2026-01-28 14:26:33] 2026-01-28 19:25:45,278 | INFO     | mean x: 1769624641.5
[2026-01-28 14:26:33] 2026-01-28 19:25:45,278 | INFO     | mean y: 2759560.382352941
[2026-01-28 14:26:33] 2026-01-28 19:25:45,278 | INFO     | intersect: -118444215533.75417
[2026-01-28 14:26:33] 2026-01-28 19:25:45,278 | INFO     | chi2: 1.431035564700437
[2026-01-28 14:26:33] 2026-01-28 19:25:45,278 | INFO     | current chi2=1.431035564700437 (change=0.034783873931021614 %)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,279 | INFO     | right removable region: 101
[2026-01-28 14:26:33] 2026-01-28 19:25:45,279 | INFO     | sum of square deviations: 379832238.0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,279 | INFO     | sum of deviations: -3035993424.0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,279 | INFO     | mean x: 1769625099.0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,279 | INFO     | mean y: 2796134.7196261683
[2026-01-28 14:26:33] 2026-01-28 19:25:45,280 | INFO     | intersect: 14147383207.682476
[2026-01-28 14:26:33] 2026-01-28 19:25:45,280 | INFO     | chi2: 0.7947561211870738
[2026-01-28 14:26:33] 2026-01-28 19:25:45,280 | INFO     | current chi2=0.7947561211870738 (change=63.336828006030125 %)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,280 | INFO     | sum of square deviations: 329031285.5
[2026-01-28 14:26:33] 2026-01-28 19:25:45,280 | INFO     | sum of deviations: -5890214412.0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,281 | INFO     | mean x: 1769625251.5
[2026-01-28 14:26:33] 2026-01-28 19:25:45,281 | INFO     | mean y: 2804542.8039215687
[2026-01-28 14:26:33] 2026-01-28 19:25:45,281 | INFO     | intersect: 31682078276.25692
[2026-01-28 14:26:33] 2026-01-28 19:25:45,281 | INFO     | chi2: 0.7628699549213828
[2026-01-28 14:26:33] 2026-01-28 19:25:45,281 | INFO     | current chi2=0.7628699549213828 (change=4.012069289641311 %)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,281 | INFO     | left removable region: 20
[2026-01-28 14:26:33] 2026-01-28 19:25:45,282 | INFO     | sum of square deviations: 164765880.0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,282 | INFO     | sum of deviations: 392185897.0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,282 | INFO     | mean x: 1769625221.0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,282 | INFO     | mean y: 2831723.839506173
[2026-01-28 14:26:33] 2026-01-28 19:25:45,282 | INFO     | intersect: -4209339234.442076
[2026-01-28 14:26:33] 2026-01-28 19:25:45,282 | INFO     | chi2: 7.967371235963032e-05
[2026-01-28 14:26:33] 2026-01-28 19:25:45,283 | INFO     | current memory leak: 2.38 B/s (using 81 data points, chi2=0.00)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,283 | INFO     | could have reported an average CPU frequency of 1712 MHz (7 samples)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,283 | INFO     | ..............................
[2026-01-28 14:26:33] 2026-01-28 19:25:45,283 | INFO     | . Timing measurements:
[2026-01-28 14:26:33] 2026-01-28 19:25:45,283 | INFO     | . get job = 0 s
[2026-01-28 14:26:33] 2026-01-28 19:25:45,283 | INFO     | . initial setup = 1 s
[2026-01-28 14:26:33] 2026-01-28 19:25:45,283 | INFO     | . payload setup = 8 s
[2026-01-28 14:26:33] 2026-01-28 19:25:45,284 | INFO     | . stage-in = 0 s
[2026-01-28 14:26:33] 2026-01-28 19:25:45,284 | INFO     | . payload execution = 6779 s
[2026-01-28 14:26:33] 2026-01-28 19:25:45,284 | INFO     | . stage-out = 1 s
[2026-01-28 14:26:33] 2026-01-28 19:25:45,284 | INFO     | . log creation = 0 s
[2026-01-28 14:26:33] 2026-01-28 19:25:45,284 | INFO     | ..............................
[2026-01-28 14:26:33] 2026-01-28 19:25:45,358 | INFO     | 
[2026-01-28 14:26:33] 2026-01-28 19:25:45,358 | INFO     | job summary report
[2026-01-28 14:26:33] 2026-01-28 19:25:45,359 | INFO     | --------------------------------------------------
[2026-01-28 14:26:33] 2026-01-28 19:25:45,359 | INFO     | PanDA job id: 6985347651
[2026-01-28 14:26:33] 2026-01-28 19:25:45,359 | INFO     | task id: 48317872
[2026-01-28 14:26:33] 2026-01-28 19:25:45,359 | INFO     | errors: (none)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,359 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 14:26:33] 2026-01-28 19:25:45,360 | INFO     | pilot state: finished 
[2026-01-28 14:26:33] 2026-01-28 19:25:45,360 | INFO     | transexitcode: 0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,360 | INFO     | exeerrorcode: 0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,360 | INFO     | exeerrordiag: 
[2026-01-28 14:26:33] 2026-01-28 19:25:45,360 | INFO     | exitcode: 0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,360 | INFO     | exitmsg: OK
[2026-01-28 14:26:33] 2026-01-28 19:25:45,361 | INFO     | cpuconsumptiontime: 50356 s
[2026-01-28 14:26:33] 2026-01-28 19:25:45,361 | INFO     | nevents: 400
[2026-01-28 14:26:33] 2026-01-28 19:25:45,361 | INFO     | neventsw: 0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,361 | INFO     | pid: 2028
[2026-01-28 14:26:33] 2026-01-28 19:25:45,361 | INFO     | pgrp: 2028
[2026-01-28 14:26:33] 2026-01-28 19:25:45,361 | INFO     | corecount: 8
[2026-01-28 14:26:33] 2026-01-28 19:25:45,362 | INFO     | event service: False
[2026-01-28 14:26:33] 2026-01-28 19:25:45,362 | INFO     | sizes: {0: 2284235, 11: 2284235, 6791: 2311368, 6793: 2320366, 6797: 2320422, 6798: 2320616}
[2026-01-28 14:26:33] 2026-01-28 19:25:45,362 | INFO     | --------------------------------------------------
[2026-01-28 14:26:33] 2026-01-28 19:25:45,362 | INFO     | 
[2026-01-28 14:26:33] 2026-01-28 19:25:45,362 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-28 14:26:33] 2026-01-28 19:25:45,393 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,393 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,393 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,394 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,394 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,397 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,398 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 14:26:33] 2026-01-28 19:25:45,398 | INFO     | job 6985347651 has completed (purged errors)
[2026-01-28 14:26:33] 2026-01-28 19:25:45,398 | INFO     | overall cleanup function is called
[2026-01-28 14:26:33] 2026-01-28 19:25:46,407 | INFO     | --- collectZombieJob: --- 10, [2028]
[2026-01-28 14:26:33] 2026-01-28 19:25:46,407 | INFO     | zombie collector waiting for pid 2028
[2026-01-28 14:26:33] 2026-01-28 19:25:46,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 14:26:33] 2026-01-28 19:25:46,407 | INFO     | collected zombie processes
[2026-01-28 14:26:33] 2026-01-28 19:25:46,407 | INFO     | will attempt to kill all subprocesses of pid=2028
[2026-01-28 14:26:33] 2026-01-28 19:25:46,496 | INFO     | process IDs to be killed: [2028] (in reverse order)
[2026-01-28 14:26:33] 2026-01-28 19:25:46,553 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 14:26:33] 2026-01-28 19:25:46,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 14:26:33] 2026-01-28 19:25:46,559 | INFO     | did not find any defunct processes belonging to 2028
[2026-01-28 14:26:33] 2026-01-28 19:25:46,562 | INFO     | did not find any defunct processes belonging to 2028
[2026-01-28 14:26:33] 2026-01-28 19:25:46,562 | INFO     | ready for new job
[2026-01-28 14:26:33] 2026-01-28 19:25:46,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 14:26:33] 2026-01-28 19:25:46,564 | INFO     | **************************************
[2026-01-28 14:26:33] 2026-01-28 19:25:46,564 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 14:26:33] 2026-01-28 19:25:46,565 | INFO     | **************************************
[2026-01-28 14:26:33] 2026-01-28 19:25:46,565 | INFO     | 
[2026-01-28 14:26:33] 2026-01-28 19:25:46,565 | INFO     | architecture information:
[2026-01-28 14:26:33] 2026-01-28 19:25:46,566 | INFO     | executing command: cat /etc/os-release
[2026-01-28 14:26:33] 2026-01-28 19:25:46,584 | INFO     | cat /etc/os-release:
[2026-01-28 14:26:33] NAME="CentOS Linux"
[2026-01-28 14:26:33] VERSION="7 (Core)"
[2026-01-28 14:26:33] ID="centos"
[2026-01-28 14:26:33] ID_LIKE="rhel fedora"
[2026-01-28 14:26:33] VERSION_ID="7"
[2026-01-28 14:26:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 14:26:33] ANSI_COLOR="0;31"
[2026-01-28 14:26:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 14:26:33] HOME_URL="https://www.centos.org/"
[2026-01-28 14:26:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 14:26:33] 
[2026-01-28 14:26:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 14:26:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 14:26:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 14:26:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 14:26:33] 
[2026-01-28 14:26:33] 2026-01-28 19:25:46,585 | INFO     | **************************************
[2026-01-28 14:26:33] 2026-01-28 19:25:47,088 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-28 14:26:33] 2026-01-28 19:25:47,108 | INFO     | sufficient remaining disk space (18022924288 B)
[2026-01-28 14:26:33] 2026-01-28 19:25:47,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 14:26:33] 2026-01-28 19:25:47,109 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 14:26:33] 2026-01-28 19:25:47,109 | INFO     | update_server=False
[2026-01-28 14:26:33] 2026-01-28 19:25:47,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 14:26:33] 2026-01-28 19:25:47,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 14:26:33] 2026-01-28 19:25:47,110 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 14:26:33] 2026-01-28 19:25:47,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 14:26:33] 2026-01-28 19:25:47,818 | INFO     | aborting loop
[2026-01-28 14:26:33] 2026-01-28 19:25:47,923 | INFO     | all payload control threads have been joined
[2026-01-28 14:26:33] 2026-01-28 19:25:48,115 | INFO     | [job] retrieve thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:48,115 | INFO     | [job] queue monitor thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:48,144 | INFO     | all data control threads have been joined
[2026-01-28 14:26:33] 2026-01-28 19:25:48,255 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:48,348 | INFO     | [payload] failed_post thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:48,535 | INFO     | all job control threads have been joined
[2026-01-28 14:26:33] 2026-01-28 19:25:48,763 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:48,766 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:48,778 | INFO     | [job] validate thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:48,781 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:48,824 | INFO     | [job] job monitor thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:48,928 | INFO     | [payload] control thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:49,116 | INFO     | [data] copytool_out thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:49,149 | INFO     | [data] control thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:49,169 | INFO     | [data] copytool_in thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:49,487 | INFO     | [payload] validate_post thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:49,541 | INFO     | [job] control thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:25:50,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 14:26:33] 2026-01-28 19:25:54,423 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 14:26:33] 2026-01-28 19:26:16,683 | INFO     | PID=32040 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-28 14:26:33] 2026-01-28 19:26:16,684 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 14:26:33] 2026-01-28 19:26:16,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 14:26:33] 2026-01-28 19:26:16,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 14:26:33] 2026-01-28 19:26:26,829 | INFO     | [monitor] cgroup control has ended
[2026-01-28 14:26:33] 2026-01-28 19:26:27,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139947009206080)>', '<ExcThread(monitor, started 139945981232896)>']
[2026-01-28 14:26:33] 2026-01-28 19:26:28,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 14:26:33] 2026-01-28 19:26:28,735 | INFO     | [monitor] control thread has ended
[2026-01-28 14:26:33] 2026-01-28 19:26:32,860 | INFO     | all workflow threads have been joined
[2026-01-28 14:26:33] 2026-01-28 19:26:32,861 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 14:26:33] 2026-01-28 19:26:32,861 | INFO     | traces error code: 0
[2026-01-28 14:26:33] 2026-01-28 19:26:32,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 14:26:33] 2026-01-28 19:26:32,979 [wrapper] ==== pilot stdout END ====
[2026-01-28 14:26:33] 2026-01-28 19:26:32,984 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 14:26:33] 2026-01-28 19:26:32,988 [wrapper] pilotpid: 32040
[2026-01-28 14:26:33] 2026-01-28 19:26:32,993 [wrapper] Pilot exit status: 0
[2026-01-28 14:26:33] 2026-01-28 19:26:33,013 [wrapper] pandaids: 6985347651 6985347651
[2026-01-28 14:26:33] 2026-01-28 19:26:33,059 [wrapper] cleanup supervisor_pilot  8679 32041
[2026-01-28 14:26:33] 2026-01-28 19:26:33,065 [wrapper] Test setup, not cleaning
[2026-01-28 14:26:33] 2026-01-28 19:26:33,069 [wrapper] apfmon messages muted
[2026-01-28 14:26:33] 2026-01-28 19:26:33,074 [wrapper] ==== wrapper stdout END ====
[2026-01-28 14:26:33] 2026-01-28 19:26:33,079 [wrapper] ==== wrapper stderr END ====
[2026-01-28 14:26:33]  *** Error codes and diagnostics ***
[2026-01-28 14:26:33]     "exeErrorCode": 0,
[2026-01-28 14:26:33]     "exeErrorDiag": "",
[2026-01-28 14:26:33]     "pilotErrorCode": 0,
[2026-01-28 14:26:33]     "pilotErrorDiag": "",
[2026-01-28 14:26:33]  *** Listing of results directory ***
[2026-01-28 14:26:33] total 1157284
[2026-01-28 14:26:33] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-28 14:26:33] -rwx------ 1 boincer umatlas     36322 Jan 28 07:28 runpilot2-wrapper.sh
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas      5111 Jan 28 07:33 queuedata.json
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas    584422 Jan 28 07:33 pilot3.tar.gz
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas       100 Jan 28 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 14:26:33] -rwxr-xr-x 1 boincer umatlas      7986 Jan 28 11:01 run_atlas
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas       105 Jan 28 11:01 job.xml
[2026-01-28 14:26:33] -rw-r--r-- 3 boincer umatlas 497012157 Jan 28 11:01 EVNT.48317869._000101.pool.root.1
[2026-01-28 14:26:33] -rw-r--r-- 3 boincer umatlas 497012157 Jan 28 11:01 ATLAS.root_0
[2026-01-28 14:26:33] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 11:01 start_atlas.sh
[2026-01-28 14:26:33] drwxrwx--x 2 boincer umatlas      4096 Jan 28 11:01 shared
[2026-01-28 14:26:33] -rw-r--r-- 2 boincer umatlas    597756 Jan 28 11:01 input.tar.gz
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas         0 Jan 28 11:01 boinc_lockfile
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas      2516 Jan 28 12:32 pandaJob.out
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas        57 Jan 28 12:32 setup.sh.local
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas   1005192 Jan 28 12:32 agis_schedconf.cvmfs.json
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas       430 Jan 28 12:32 workernode_map.json
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas      5910 Jan 28 14:19 init_data.xml
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas 184376504 Jan 28 14:25 HITS.48317872._005067.pool.root.1
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas       531 Jan 28 14:25 boinc_task_state.xml
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas      1043 Jan 28 14:25 memory_monitor_summary.json
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas   1516246 Jan 28 14:25 agis_ddmendpoints.agis.ALL.json
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas    390569 Jan 28 14:25 log.48317872._005067.job.log.tgz.1
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas      6384 Jan 28 14:25 heartbeat.json
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas        28 Jan 28 14:25 wrapper_checkpoint.txt
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas      8192 Jan 28 14:25 boinc_mmap_file
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas        96 Jan 28 14:26 pilot_heartbeat.json
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas      4742 Jan 28 14:26 pilotlog.txt
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas    965275 Jan 28 14:26 log.48317872._005067.job.log.1
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas       357 Jan 28 14:26 output.list
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas       620 Jan 28 14:26 runtime_log
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas   1372160 Jan 28 14:26 result.tar.gz
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas      9421 Jan 28 14:26 runtime_log.err
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas       779 Jan 28 14:26 dx9KDmqpJ58n9Rq4apOajLDm4fhM0noT9bVooX4SDmZtFKDmV6AVlm.diag
[2026-01-28 14:26:33] -rw-r--r-- 1 boincer umatlas     23154 Jan 28 14:26 stderr.txt
[2026-01-28 14:26:33] HITS file was successfully produced:
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas 184376504 Jan 28 14:25 shared/HITS.pool.root.1
[2026-01-28 14:26:33]  *** Contents of shared directory: ***
[2026-01-28 14:26:33] total 667368
[2026-01-28 14:26:33] -rw-r--r-- 3 boincer umatlas 497012157 Jan 28 11:01 ATLAS.root_0
[2026-01-28 14:26:33] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 11:01 start_atlas.sh
[2026-01-28 14:26:33] -rw-r--r-- 2 boincer umatlas    597756 Jan 28 11:01 input.tar.gz
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas 184376504 Jan 28 14:25 HITS.pool.root.1
[2026-01-28 14:26:33] -rw------- 1 boincer umatlas   1372160 Jan 28 14:26 result.tar.gz
14:26:35 (28260): run_atlas exited; CPU time 50364.278543
14:26:35 (28260): called boinc_finish(0)

</stderr_txt>
]]>

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