Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:48:06 (357339): wrapper (7.7.26015): starting
16:48:06 (357339): wrapper: running run_atlas (--nthreads 10)
[2026-01-28 16:48:06] Arguments: --nthreads 10
[2026-01-28 16:48:06] Threads: 10
[2026-01-28 16:48:06] Checking for CVMFS
[2026-01-28 16:48:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 16:48:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 16:48:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 16:48:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 16:48:09] 2.13.3.0 73771 44800 312376 155626 3 239 26996509 40960000 15313 16776704 0 45586890 99.623 47401788 36839 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-28 16:48:09] CVMFS is ok
[2026-01-28 16:48:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 16:48:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 16:48:09] Further information can be found at the LHC@home message board.
[2026-01-28 16:48:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 16:48:09] Checking for apptainer binary...
[2026-01-28 16:48:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 16:48:09] Running /usr/bin/apptainer --version
[2026-01-28 16:48:09] apptainer version 1.4.5-2.el9
[2026-01-28 16:48:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 16:48:10] c-210-31-3.aglt2.org
[2026-01-28 16:48:10] apptainer works
[2026-01-28 16:48:10] Set ATHENA_PROC_NUMBER=10
[2026-01-28 16:48:10] Set ATHENA_CORE_NUMBER=10
[2026-01-28 16:48:10] Starting ATLAS job with PandaID=6985859461
[2026-01-28 16:48:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 20:52:43]  *** The last 200 lines of the pilot log: ***
[2026-01-28 20:52:43] 2026-01-29 01:51:57,298 | INFO     | monitor loop #922: job 0:6985859461 is in state 'finished'
[2026-01-28 20:52:43] 2026-01-29 01:51:57,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-28 20:52:43] 2026-01-29 01:51:57,757 | INFO     | job 6985859461 has state=finished
[2026-01-28 20:52:43] 2026-01-29 01:51:57,757 | INFO     | preparing for final server update for job 6985859461 in state='finished'
[2026-01-28 20:52:43] 2026-01-29 01:51:57,757 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6985859461/jobReport.json
[2026-01-28 20:52:43] 2026-01-29 01:51:57,760 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-28 20:52:43] 2026-01-29 01:51:57,760 | INFO     | this job has now completed (state=finished)
[2026-01-28 20:52:43] 2026-01-29 01:51:57,760 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 20:52:43] 2026-01-29 01:51:57,760 | INFO     | log transfer has been attempted: DONE
[2026-01-28 20:52:43] 2026-01-29 01:51:57,760 | INFO     | job 6985859461 has finished - writing final server update
[2026-01-28 20:52:43] 2026-01-29 01:51:57,798 | INFO     | total number of processed events: 400 (read)
[2026-01-28 20:52:43] 2026-01-29 01:51:57,880 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6985859461/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 20:52:43] 2026-01-29 01:51:57,880 | INFO     | extracted standard info from prmon json
[2026-01-28 20:52:43] 2026-01-29 01:51:57,880 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 20:52:43] 2026-01-29 01:51:57,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 20:52:43] 2026-01-29 01:51:57,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 20:52:43] 2026-01-29 01:51:57,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 20:52:43] 2026-01-29 01:51:57,889 | INFO     | fitting pss+swap vs Time
[2026-01-28 20:52:43] 2026-01-29 01:51:57,890 | INFO     | sum of square deviations: 4127627032.2531776
[2026-01-28 20:52:43] 2026-01-29 01:51:57,895 | INFO     | sum of deviations: 35133948314.46835
[2026-01-28 20:52:43] 2026-01-29 01:51:57,895 | INFO     | mean x: 1769644308.734177
[2026-01-28 20:52:43] 2026-01-29 01:51:57,896 | INFO     | mean y: 2798679.658227848
[2026-01-28 20:52:43] 2026-01-29 01:51:57,896 | INFO     | intersect: -15060236616.948975
[2026-01-28 20:52:43] 2026-01-29 01:51:57,896 | INFO     | chi2: 3.266791382906462
[2026-01-28 20:52:43] 2026-01-29 01:51:57,896 | INFO     | sum of square deviations: 3871840977.4310284
[2026-01-28 20:52:43] 2026-01-29 01:51:57,902 | INFO     | sum of deviations: 52903411862.19831
[2026-01-28 20:52:43] 2026-01-29 01:51:57,902 | INFO     | mean x: 1769644156.2327585
[2026-01-28 20:52:43] 2026-01-29 01:51:57,902 | INFO     | mean y: 2809087.7370689656
[2026-01-28 20:52:43] 2026-01-29 01:51:57,902 | INFO     | intersect: -24176958157.98054
[2026-01-28 20:52:43] 2026-01-29 01:51:57,903 | INFO     | chi2: 2.464115576740433
[2026-01-28 20:52:43] 2026-01-29 01:51:57,903 | INFO     | current chi2=2.464115576740433 (change=24.570770278323963 %)
[2026-01-28 20:52:43] 2026-01-29 01:51:57,903 | INFO     | right removable region: 231
[2026-01-28 20:52:43] 2026-01-29 01:51:57,903 | INFO     | sum of square deviations: 3871792419.5
[2026-01-28 20:52:43] 2026-01-29 01:51:57,905 | INFO     | sum of deviations: -24688438351.499996
[2026-01-28 20:52:43] 2026-01-29 01:51:57,905 | INFO     | mean x: 1769644461.25
[2026-01-28 20:52:43] 2026-01-29 01:51:57,905 | INFO     | mean y: 2834167.7672413792
[2026-01-28 20:52:43] 2026-01-29 01:51:57,905 | INFO     | intersect: 11286951044.902433
[2026-01-28 20:52:43] 2026-01-29 01:51:57,905 | INFO     | chi2: 1.1178768644865564
[2026-01-28 20:52:43] 2026-01-29 01:51:57,906 | INFO     | current chi2=1.1178768644865564 (change=65.78058610244092 %)
[2026-01-28 20:52:43] 2026-01-29 01:51:57,910 | INFO     | sum of square deviations: 3626762615.1542053
[2026-01-28 20:52:43] 2026-01-29 01:51:57,911 | INFO     | sum of deviations: -41135791246.11894
[2026-01-28 20:52:43] 2026-01-29 01:51:57,912 | INFO     | mean x: 1769644613.7621145
[2026-01-28 20:52:43] 2026-01-29 01:51:57,912 | INFO     | mean y: 2844366.497797357
[2026-01-28 20:52:43] 2026-01-29 01:51:57,912 | INFO     | intersect: 20074665749.944466
[2026-01-28 20:52:43] 2026-01-29 01:51:57,912 | INFO     | chi2: 0.9454356426884036
[2026-01-28 20:52:43] 2026-01-29 01:51:57,912 | INFO     | current chi2=0.9454356426884036 (change=15.425779643212802 %)
[2026-01-28 20:52:43] 2026-01-29 01:51:57,912 | INFO     | left removable region: 20
[2026-01-28 20:52:43] 2026-01-29 01:51:57,913 | INFO     | sum of square deviations: 2912611457.184814
[2026-01-28 20:52:43] 2026-01-29 01:51:57,918 | INFO     | sum of deviations: -25135211012.69194
[2026-01-28 20:52:43] 2026-01-29 01:51:57,918 | INFO     | mean x: 1769644735.7535546
[2026-01-28 20:52:43] 2026-01-29 01:51:57,918 | INFO     | mean y: 2858082.255924171
[2026-01-28 20:52:43] 2026-01-29 01:51:57,918 | INFO     | intersect: 15274511890.023888
[2026-01-28 20:52:43] 2026-01-29 01:51:57,919 | INFO     | chi2: 0.0722851677102909
[2026-01-28 20:52:43] 2026-01-29 01:51:57,919 | INFO     | current memory leak: -8.63 B/s (using 211 data points, chi2=0.07)
[2026-01-28 20:52:43] 2026-01-29 01:51:57,919 | INFO     | could have reported an average CPU frequency of 2914 MHz (12 samples)
[2026-01-28 20:52:43] 2026-01-29 01:51:57,920 | INFO     | ..............................
[2026-01-28 20:52:43] 2026-01-29 01:51:57,920 | INFO     | . Timing measurements:
[2026-01-28 20:52:43] 2026-01-29 01:51:57,920 | INFO     | . get job = 0 s
[2026-01-28 20:52:43] 2026-01-29 01:51:57,920 | INFO     | . initial setup = 46 s
[2026-01-28 20:52:43] 2026-01-29 01:51:57,920 | INFO     | . payload setup = 42 s
[2026-01-28 20:52:43] 2026-01-29 01:51:57,920 | INFO     | . stage-in = 1 s
[2026-01-28 20:52:43] 2026-01-29 01:51:57,920 | INFO     | . payload execution = 14438 s
[2026-01-28 20:52:43] 2026-01-29 01:51:57,920 | INFO     | . stage-out = 2 s
[2026-01-28 20:52:43] 2026-01-29 01:51:57,920 | INFO     | . log creation = 0 s
[2026-01-28 20:52:43] 2026-01-29 01:51:57,920 | INFO     | ..............................
[2026-01-28 20:52:43] 2026-01-29 01:51:58,187 | INFO     | 
[2026-01-28 20:52:43] 2026-01-29 01:51:58,187 | INFO     | job summary report
[2026-01-28 20:52:43] 2026-01-29 01:51:58,187 | INFO     | --------------------------------------------------
[2026-01-28 20:52:43] 2026-01-29 01:51:58,187 | INFO     | PanDA job id: 6985859461
[2026-01-28 20:52:43] 2026-01-29 01:51:58,187 | INFO     | task id: 48317931
[2026-01-28 20:52:43] 2026-01-29 01:51:58,187 | INFO     | errors: (none)
[2026-01-28 20:52:43] 2026-01-29 01:51:58,187 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 20:52:43] 2026-01-29 01:51:58,187 | INFO     | pilot state: finished 
[2026-01-28 20:52:43] 2026-01-29 01:51:58,187 | INFO     | transexitcode: 0
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | exeerrorcode: 0
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | exeerrordiag: 
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | exitcode: 0
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | exitmsg: OK
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | cpuconsumptiontime: 41366 s
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | nevents: 400
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | neventsw: 0
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | pid: 368546
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | pgrp: 368546
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | corecount: 10
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | event service: False
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | sizes: {0: 2283086, 1: 2283687, 2: 2283771, 4: 2240905, 5: 2240905, 6: 2284444, 17: 2284444, 14486: 2315253, 14489: 2324251, 14492: 2324307, 14493: 2324501}
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | --------------------------------------------------
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | 
[2026-01-28 20:52:43] 2026-01-29 01:51:58,188 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-28 20:52:43] 2026-01-29 01:51:58,279 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,280 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,280 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,280 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,281 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,282 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,282 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,282 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,282 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,283 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 20:52:43] 2026-01-29 01:51:58,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,283 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 20:52:43] 2026-01-29 01:51:58,284 | INFO     | job 6985859461 has completed (purged errors)
[2026-01-28 20:52:43] 2026-01-29 01:51:58,285 | INFO     | overall cleanup function is called
[2026-01-28 20:52:43] 2026-01-29 01:51:59,297 | INFO     | --- collectZombieJob: --- 10, [368546]
[2026-01-28 20:52:43] 2026-01-29 01:51:59,297 | INFO     | zombie collector waiting for pid 368546
[2026-01-28 20:52:43] 2026-01-29 01:51:59,297 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 20:52:43] 2026-01-29 01:51:59,297 | INFO     | collected zombie processes
[2026-01-28 20:52:43] 2026-01-29 01:51:59,297 | INFO     | will attempt to kill all subprocesses of pid=368546
[2026-01-28 20:52:43] 2026-01-29 01:52:00,204 | INFO     | process IDs to be killed: [368546] (in reverse order)
[2026-01-28 20:52:43] 2026-01-29 01:52:00,462 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 20:52:43] 2026-01-29 01:52:00,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 20:52:43] 2026-01-29 01:52:00,488 | INFO     | did not find any defunct processes belonging to 368546
[2026-01-28 20:52:43] 2026-01-29 01:52:00,511 | INFO     | did not find any defunct processes belonging to 368546
[2026-01-28 20:52:43] 2026-01-29 01:52:00,512 | INFO     | ready for new job
[2026-01-28 20:52:43] 2026-01-29 01:52:00,512 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 20:52:43] 2026-01-29 01:52:00,518 | INFO     | **************************************
[2026-01-28 20:52:43] 2026-01-29 01:52:00,518 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 20:52:43] 2026-01-29 01:52:00,519 | INFO     | **************************************
[2026-01-28 20:52:43] 2026-01-29 01:52:00,519 | INFO     | 
[2026-01-28 20:52:43] 2026-01-29 01:52:00,526 | INFO     | architecture information:
[2026-01-28 20:52:43] 2026-01-29 01:52:00,526 | INFO     | executing command: cat /etc/os-release
[2026-01-28 20:52:43] 2026-01-29 01:52:00,557 | INFO     | cat /etc/os-release:
[2026-01-28 20:52:43] NAME="CentOS Linux"
[2026-01-28 20:52:43] VERSION="7 (Core)"
[2026-01-28 20:52:43] ID="centos"
[2026-01-28 20:52:43] ID_LIKE="rhel fedora"
[2026-01-28 20:52:43] VERSION_ID="7"
[2026-01-28 20:52:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 20:52:43] ANSI_COLOR="0;31"
[2026-01-28 20:52:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 20:52:43] HOME_URL="https://www.centos.org/"
[2026-01-28 20:52:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 20:52:43] 
[2026-01-28 20:52:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 20:52:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 20:52:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 20:52:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 20:52:43] 
[2026-01-28 20:52:43] 2026-01-29 01:52:00,558 | INFO     | **************************************
[2026-01-28 20:52:43] 2026-01-29 01:52:01,062 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-28 20:52:43] 2026-01-29 01:52:01,185 | INFO     | sufficient remaining disk space (72168243200 B)
[2026-01-28 20:52:43] 2026-01-29 01:52:01,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 20:52:43] 2026-01-29 01:52:01,186 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 20:52:43] 2026-01-29 01:52:01,186 | INFO     | update_server=False
[2026-01-28 20:52:43] 2026-01-29 01:52:01,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 20:52:43] 2026-01-29 01:52:01,187 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 20:52:43] 2026-01-29 01:52:01,187 | INFO     | aborting loop
[2026-01-28 20:52:43] 2026-01-29 01:52:01,706 | INFO     | all job control threads have been joined
[2026-01-28 20:52:43] 2026-01-29 01:52:02,192 | INFO     | [job] retrieve thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:02,199 | INFO     | [job] job monitor thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:02,272 | INFO     | [payload] validate_post thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:02,295 | INFO     | all data control threads have been joined
[2026-01-28 20:52:43] 2026-01-29 01:52:02,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 20:52:43] 2026-01-29 01:52:02,377 | INFO     | [payload] failed_post thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:02,498 | INFO     | [job] validate thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:02,637 | INFO     | all payload control threads have been joined
[2026-01-28 20:52:43] 2026-01-29 01:52:02,712 | INFO     | [job] control thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:02,717 | INFO     | [data] copytool_in thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:02,723 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:02,747 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:02,907 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:03,135 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 20:52:43] 2026-01-29 01:52:03,263 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:03,301 | INFO     | [data] control thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:03,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 20:52:43] 2026-01-29 01:52:03,643 | INFO     | [payload] control thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:04,143 | INFO     | [job] queue monitor thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:04,334 | INFO     | [data] copytool_out thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:07,522 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 20:52:43] 2026-01-29 01:52:29,948 | INFO     | PID=361667 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-28 20:52:43] 2026-01-29 01:52:29,948 | INFO     | .. there are 17 such processes running
[2026-01-28 20:52:43] 2026-01-29 01:52:29,949 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 20:52:43] 2026-01-29 01:52:29,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 20:52:43] 2026-01-29 01:52:29,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 20:52:43] 2026-01-29 01:52:33,243 | INFO     | [monitor] cgroup control has ended
[2026-01-28 20:52:43] 2026-01-29 01:52:34,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140384255244096)>', '<ExcThread(monitor, started 140383682029312)>']
[2026-01-28 20:52:43] 2026-01-29 01:52:34,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 20:52:43] 2026-01-29 01:52:34,979 | INFO     | [monitor] control thread has ended
[2026-01-28 20:52:43] 2026-01-29 01:52:39,996 | INFO     | all workflow threads have been joined
[2026-01-28 20:52:43] 2026-01-29 01:52:39,996 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 20:52:43] 2026-01-29 01:52:39,996 | INFO     | traces error code: 0
[2026-01-28 20:52:43] 2026-01-29 01:52:39,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 20:52:43] 2026-01-29 01:52:41,609 [wrapper] ==== pilot stdout END ====
[2026-01-28 20:52:43] 2026-01-29 01:52:41,623 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 20:52:43] 2026-01-29 01:52:41,637 [wrapper] pilotpid: 361667
[2026-01-28 20:52:43] 2026-01-29 01:52:41,670 [wrapper] Pilot exit status: 0
[2026-01-28 20:52:43] 2026-01-29 01:52:41,805 [wrapper] pandaids: 6985859461
[2026-01-28 20:52:43] 2026-01-29 01:52:42,000 [wrapper] cleanup supervisor_pilot  858442 361668
[2026-01-28 20:52:43] 2026-01-29 01:52:42,005 [wrapper] Test setup, not cleaning
[2026-01-28 20:52:43] 2026-01-29 01:52:42,008 [wrapper] apfmon messages muted
[2026-01-28 20:52:43] 2026-01-29 01:52:42,010 [wrapper] ==== wrapper stdout END ====
[2026-01-28 20:52:43] 2026-01-29 01:52:42,013 [wrapper] ==== wrapper stderr END ====
[2026-01-28 20:52:43]  *** Error codes and diagnostics ***
[2026-01-28 20:52:43]     "exeErrorCode": 0,
[2026-01-28 20:52:43]     "exeErrorDiag": "",
[2026-01-28 20:52:43]     "pilotErrorCode": 0,
[2026-01-28 20:52:43]     "pilotErrorDiag": "",
[2026-01-28 20:52:43]  *** Listing of results directory ***
[2026-01-28 20:52:43] total 668484
[2026-01-28 20:52:43] -rwx------. 1 boincer umatlas     36322 Jan 28 10:24 runpilot2-wrapper.sh
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas    584422 Jan 28 10:25 pilot3.tar.gz
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas      5111 Jan 28 10:26 queuedata.json
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas       100 Jan 28 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 20:52:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 28 16:48 run_atlas
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas       105 Jan 28 16:48 job.xml
[2026-01-28 20:52:43] -rw-r--r--. 2 boincer umatlas 492821406 Jan 28 16:48 EVNT.48317929._000107.pool.root.1
[2026-01-28 20:52:43] -rw-r--r--. 2 boincer umatlas     15845 Jan 28 16:48 start_atlas.sh
[2026-01-28 20:52:43] drwxrwx--x. 2 boincer umatlas      4096 Jan 28 16:48 shared
[2026-01-28 20:52:43] -rw-r--r--. 2 boincer umatlas    597755 Jan 28 16:48 input.tar.gz
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas         0 Jan 28 16:48 boinc_lockfile
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas      2508 Jan 28 16:48 pandaJob.out
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas        57 Jan 28 16:48 setup.sh.local
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas   1005755 Jan 28 16:49 agis_schedconf.cvmfs.json
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas       443 Jan 28 16:50 workernode_map.json
[2026-01-28 20:52:43] drwx------. 5 boincer umatlas      4096 Jan 28 16:50 pilot3
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas      6844 Jan 28 20:47 init_data.xml
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas 183039734 Jan 28 20:51 HITS.48317931._004138.pool.root.1
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas       531 Jan 28 20:51 boinc_task_state.xml
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas      1045 Jan 28 20:51 memory_monitor_summary.json
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas   1516246 Jan 28 20:51 agis_ddmendpoints.agis.ALL.json
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas    488562 Jan 28 20:51 log.48317931._004138.job.log.tgz.1
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas      6398 Jan 28 20:51 heartbeat.json
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas        95 Jan 28 20:52 pilot_heartbeat.json
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas        28 Jan 28 20:52 wrapper_checkpoint.txt
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas      4819 Jan 28 20:52 pilotlog.txt
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas   1872133 Jan 28 20:52 log.48317931._004138.job.log.1
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas      8192 Jan 28 20:52 boinc_mmap_file
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas       357 Jan 28 20:52 output.list
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas       620 Jan 28 20:52 runtime_log
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas   2375680 Jan 28 20:52 result.tar.gz
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas      9354 Jan 28 20:52 runtime_log.err
[2026-01-28 20:52:43] -rw-------. 1 boincer umatlas       657 Jan 28 20:52 Fm2KDmZaM58n9Rq4apOajLDm4fhM0noT9bVooX4SDmYNGKDml0Ujrn.diag
[2026-01-28 20:52:43] -rw-r--r--. 1 boincer umatlas     21384 Jan 28 20:52 stderr.txt
[2026-01-28 20:53:02] HITS file was successfully produced:
[2026-01-28 20:53:02] -rw-------. 1 boincer umatlas 183039734 Jan 28 20:51 shared/HITS.pool.root.1
[2026-01-28 20:53:02]  *** Contents of shared directory: ***
[2026-01-28 20:53:02] total 662952
[2026-01-28 20:53:02] -rw-r--r--. 2 boincer umatlas 492821406 Jan 28 16:48 ATLAS.root_0
[2026-01-28 20:53:02] -rw-r--r--. 2 boincer umatlas     15845 Jan 28 16:48 start_atlas.sh
[2026-01-28 20:53:02] -rw-r--r--. 2 boincer umatlas    597755 Jan 28 16:48 input.tar.gz
[2026-01-28 20:53:02] -rw-------. 1 boincer umatlas 183039734 Jan 28 20:51 HITS.pool.root.1
[2026-01-28 20:53:02] -rw-------. 1 boincer umatlas   2375680 Jan 28 20:52 result.tar.gz
20:53:03 (357339): run_atlas exited; CPU time 41696.162833
20:53:03 (357339): called boinc_finish(0)

</stderr_txt>
]]>

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