Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:40:49 (24324): wrapper (7.7.26015): starting
00:40:49 (24324): wrapper: running run_atlas (--nthreads 8)
[2026-01-29 00:40:49] Arguments: --nthreads 8
[2026-01-29 00:40:49] Threads: 8
[2026-01-29 00:40:49] Checking for CVMFS
[2026-01-29 00:40:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 00:40:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 00:40:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 00:40:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 00:40:56] 2.11.2.0 28025 63449 134792 155626 2 329 24438485 25165825 572 130560 0 20976880 99.823 16965755 3590 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-29 00:40:56] CVMFS is ok
[2026-01-29 00:40:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 00:40:56] Checking for apptainer binary...
[2026-01-29 00:40:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 00:40:56] Running /usr/bin/apptainer --version
[2026-01-29 00:40:56] apptainer version 1.3.2-1.el7
[2026-01-29 00:40:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 00:41:22] cg-vwn402.simple-grid.lan
[2026-01-29 00:41:22] apptainer works
[2026-01-29 00:41:22] Set ATHENA_PROC_NUMBER=8
[2026-01-29 00:41:22] Set ATHENA_CORE_NUMBER=8
[2026-01-29 00:41:22] Starting ATLAS job with PandaID=6985347526
[2026-01-29 00:41:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 03:50:00]  *** The last 200 lines of the pilot log: ***
[2026-01-29 03:50:00] 2026-01-29 02:49:21,524 | INFO     | current chi2=0.0002193024065685544 (change=43.940263304780494 %)
[2026-01-29 03:50:00] 2026-01-29 02:49:21,525 | INFO     | sum of square deviations: 832722590.0
[2026-01-29 03:50:00] 2026-01-29 02:49:21,526 | INFO     | sum of deviations: 3343767460.0
[2026-01-29 03:50:00] 2026-01-29 02:49:21,526 | INFO     | mean x: 1769650700.0
[2026-01-29 03:50:00] 2026-01-29 02:49:21,526 | INFO     | mean y: 2799489.690647482
[2026-01-29 03:50:00] 2026-01-29 02:49:21,526 | INFO     | intersect: -7103168929.187268
[2026-01-29 03:50:00] 2026-01-29 02:49:21,526 | INFO     | chi2: 0.0001551190876748347
[2026-01-29 03:50:00] 2026-01-29 02:49:21,526 | INFO     | current chi2=0.0001551190876748347 (change=29.267038104142213 %)
[2026-01-29 03:50:00] 2026-01-29 02:49:21,527 | INFO     | sum of square deviations: 746051197.5
[2026-01-29 03:50:00] 2026-01-29 02:49:21,527 | INFO     | sum of deviations: 2834726608.0000005
[2026-01-29 03:50:00] 2026-01-29 02:49:21,527 | INFO     | mean x: 1769650852.5
[2026-01-29 03:50:00] 2026-01-29 02:49:21,528 | INFO     | mean y: 2800385.0597014925
[2026-01-29 03:50:00] 2026-01-29 02:49:21,528 | INFO     | intersect: -6721237288.57681
[2026-01-29 03:50:00] 2026-01-29 02:49:21,528 | INFO     | chi2: 0.00011025602865069954
[2026-01-29 03:50:00] 2026-01-29 02:49:21,528 | INFO     | current chi2=0.00011025602865069954 (change=28.921688295497493 %)
[2026-01-29 03:50:00] 2026-01-29 02:49:21,528 | INFO     | sum of square deviations: 665612480.0
[2026-01-29 03:50:00] 2026-01-29 02:49:21,529 | INFO     | sum of deviations: 2383496188.0
[2026-01-29 03:50:00] 2026-01-29 02:49:21,529 | INFO     | mean x: 1769651005.0
[2026-01-29 03:50:00] 2026-01-29 02:49:21,529 | INFO     | mean y: 2801240.534883721
[2026-01-29 03:50:00] 2026-01-29 02:49:21,529 | INFO     | intersect: -6334153896.646241
[2026-01-29 03:50:00] 2026-01-29 02:49:21,530 | INFO     | chi2: 7.22781191991402e-05
[2026-01-29 03:50:00] 2026-01-29 02:49:21,530 | INFO     | current chi2=7.22781191991402e-05 (change=34.44519988278971 %)
[2026-01-29 03:50:00] 2026-01-29 02:49:21,530 | INFO     | sum of square deviations: 591173875.0
[2026-01-29 03:50:00] 2026-01-29 02:49:21,531 | INFO     | sum of deviations: 2024089799.9999998
[2026-01-29 03:50:00] 2026-01-29 02:49:21,531 | INFO     | mean x: 1769651157.5
[2026-01-29 03:50:00] 2026-01-29 02:49:21,531 | INFO     | mean y: 2801974.290322581
[2026-01-29 03:50:00] 2026-01-29 02:49:21,531 | INFO     | intersect: -6056215531.268331
[2026-01-29 03:50:00] 2026-01-29 02:49:21,532 | INFO     | chi2: 4.909289663208769e-05
[2026-01-29 03:50:00] 2026-01-29 02:49:21,532 | INFO     | current chi2=4.909289663208769e-05 (change=32.07778899610369 %)
[2026-01-29 03:50:00] 2026-01-29 02:49:21,532 | INFO     | sum of square deviations: 522502820.0
[2026-01-29 03:50:00] 2026-01-29 02:49:21,533 | INFO     | sum of deviations: 1756512811.9999998
[2026-01-29 03:50:00] 2026-01-29 02:49:21,533 | INFO     | mean x: 1769651310.0
[2026-01-29 03:50:00] 2026-01-29 02:49:21,533 | INFO     | mean y: 2802568.462184874
[2026-01-29 03:50:00] 2026-01-29 02:49:21,533 | INFO     | intersect: -5946285321.221518
[2026-01-29 03:50:00] 2026-01-29 02:49:21,534 | INFO     | chi2: 4.687069931868561e-05
[2026-01-29 03:50:00] 2026-01-29 02:49:21,534 | INFO     | current chi2=4.687069931868561e-05 (change=4.526514966219424 %)
[2026-01-29 03:50:00] 2026-01-29 02:49:21,534 | INFO     | left removable region: 110
[2026-01-29 03:50:00] 2026-01-29 02:49:21,534 | INFO     | sum of square deviations: 60482994.5
[2026-01-29 03:50:00] 2026-01-29 02:49:21,534 | INFO     | sum of deviations: 107551052.0
[2026-01-29 03:50:00] 2026-01-29 02:49:21,534 | INFO     | mean x: 1769652804.5
[2026-01-29 03:50:00] 2026-01-29 02:49:21,535 | INFO     | mean y: 2808335.3448275863
[2026-01-29 03:50:00] 2026-01-29 02:49:21,535 | INFO     | intersect: -3143993875.2951455
[2026-01-29 03:50:00] 2026-01-29 02:49:21,535 | INFO     | chi2: 8.564025324420422e-06
[2026-01-29 03:50:00] 2026-01-29 02:49:21,535 | INFO     | current memory leak: 1.78 B/s (using 58 data points, chi2=0.00)
[2026-01-29 03:50:00] 2026-01-29 02:49:21,536 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-01-29 03:50:00] 2026-01-29 02:49:21,536 | INFO     | ..............................
[2026-01-29 03:50:00] 2026-01-29 02:49:21,536 | INFO     | . Timing measurements:
[2026-01-29 03:50:00] 2026-01-29 02:49:21,536 | INFO     | . get job = 0 s
[2026-01-29 03:50:00] 2026-01-29 02:49:21,536 | INFO     | . initial setup = 115 s
[2026-01-29 03:50:00] 2026-01-29 02:49:21,536 | INFO     | . payload setup = 143 s
[2026-01-29 03:50:00] 2026-01-29 02:49:21,536 | INFO     | . stage-in = 0 s
[2026-01-29 03:50:00] 2026-01-29 02:49:21,537 | INFO     | . payload execution = 10741 s
[2026-01-29 03:50:00] 2026-01-29 02:49:21,537 | INFO     | . stage-out = 1 s
[2026-01-29 03:50:00] 2026-01-29 02:49:21,537 | INFO     | . log creation = 0 s
[2026-01-29 03:50:00] 2026-01-29 02:49:21,537 | INFO     | ..............................
[2026-01-29 03:50:00] 2026-01-29 02:49:22,132 | INFO     | 
[2026-01-29 03:50:00] 2026-01-29 02:49:22,132 | INFO     | job summary report
[2026-01-29 03:50:00] 2026-01-29 02:49:22,132 | INFO     | --------------------------------------------------
[2026-01-29 03:50:00] 2026-01-29 02:49:22,133 | INFO     | PanDA job id: 6985347526
[2026-01-29 03:50:00] 2026-01-29 02:49:22,133 | INFO     | task id: 48317872
[2026-01-29 03:50:00] 2026-01-29 02:49:22,133 | INFO     | errors: (none)
[2026-01-29 03:50:00] 2026-01-29 02:49:22,133 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 03:50:00] 2026-01-29 02:49:22,133 | INFO     | pilot state: finished 
[2026-01-29 03:50:00] 2026-01-29 02:49:22,133 | INFO     | transexitcode: 0
[2026-01-29 03:50:00] 2026-01-29 02:49:22,133 | INFO     | exeerrorcode: 0
[2026-01-29 03:50:00] 2026-01-29 02:49:22,133 | INFO     | exeerrordiag: 
[2026-01-29 03:50:00] 2026-01-29 02:49:22,133 | INFO     | exitcode: 0
[2026-01-29 03:50:00] 2026-01-29 02:49:22,133 | INFO     | exitmsg: OK
[2026-01-29 03:50:00] 2026-01-29 02:49:22,134 | INFO     | cpuconsumptiontime: 55199 s
[2026-01-29 03:50:00] 2026-01-29 02:49:22,134 | INFO     | nevents: 400
[2026-01-29 03:50:00] 2026-01-29 02:49:22,134 | INFO     | neventsw: 0
[2026-01-29 03:50:00] 2026-01-29 02:49:22,134 | INFO     | pid: 411
[2026-01-29 03:50:00] 2026-01-29 02:49:22,134 | INFO     | pgrp: 411
[2026-01-29 03:50:00] 2026-01-29 02:49:22,134 | INFO     | corecount: 8
[2026-01-29 03:50:00] 2026-01-29 02:49:22,134 | INFO     | event service: False
[2026-01-29 03:50:00] 2026-01-29 02:49:22,134 | INFO     | sizes: {0: 2283743, 1: 2283827, 2: 2284288, 13: 2284288, 10888: 2313447, 10889: 2313446, 10890: 2322684, 10892: 2322822}
[2026-01-29 03:50:00] 2026-01-29 02:49:22,134 | INFO     | --------------------------------------------------
[2026-01-29 03:50:00] 2026-01-29 02:49:22,134 | INFO     | 
[2026-01-29 03:50:00] 2026-01-29 02:49:22,135 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-29 03:50:00] 2026-01-29 02:49:22,157 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,157 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,157 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,157 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,159 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 03:50:00] 2026-01-29 02:49:22,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,159 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 03:50:00] 2026-01-29 02:49:22,159 | INFO     | job 6985347526 has completed (purged errors)
[2026-01-29 03:50:00] 2026-01-29 02:49:22,159 | INFO     | overall cleanup function is called
[2026-01-29 03:50:00] 2026-01-29 02:49:23,166 | INFO     | --- collectZombieJob: --- 10, [411]
[2026-01-29 03:50:00] 2026-01-29 02:49:23,167 | INFO     | zombie collector waiting for pid 411
[2026-01-29 03:50:00] 2026-01-29 02:49:23,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 03:50:00] 2026-01-29 02:49:23,167 | INFO     | collected zombie processes
[2026-01-29 03:50:00] 2026-01-29 02:49:23,167 | INFO     | will attempt to kill all subprocesses of pid=411
[2026-01-29 03:50:00] 2026-01-29 02:49:23,233 | INFO     | process IDs to be killed: [411] (in reverse order)
[2026-01-29 03:50:00] 2026-01-29 02:49:23,275 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 03:50:00] 2026-01-29 02:49:23,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 03:50:00] 2026-01-29 02:49:23,277 | INFO     | did not find any defunct processes belonging to 411
[2026-01-29 03:50:00] 2026-01-29 02:49:23,279 | INFO     | did not find any defunct processes belonging to 411
[2026-01-29 03:50:00] 2026-01-29 02:49:23,279 | INFO     | ready for new job
[2026-01-29 03:50:00] 2026-01-29 02:49:23,279 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 03:50:00] 2026-01-29 02:49:23,281 | INFO     | **************************************
[2026-01-29 03:50:00] 2026-01-29 02:49:23,281 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 03:50:00] 2026-01-29 02:49:23,281 | INFO     | **************************************
[2026-01-29 03:50:00] 2026-01-29 02:49:23,281 | INFO     | 
[2026-01-29 03:50:00] 2026-01-29 02:49:23,282 | INFO     | pilot is running in a VM
[2026-01-29 03:50:00] 2026-01-29 02:49:23,282 | INFO     | architecture information:
[2026-01-29 03:50:00] 2026-01-29 02:49:23,283 | INFO     | executing command: cat /etc/os-release
[2026-01-29 03:50:00] 2026-01-29 02:49:23,299 | INFO     | cat /etc/os-release:
[2026-01-29 03:50:00] NAME="CentOS Linux"
[2026-01-29 03:50:00] VERSION="7 (Core)"
[2026-01-29 03:50:00] ID="centos"
[2026-01-29 03:50:00] ID_LIKE="rhel fedora"
[2026-01-29 03:50:00] VERSION_ID="7"
[2026-01-29 03:50:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 03:50:00] ANSI_COLOR="0;31"
[2026-01-29 03:50:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 03:50:00] HOME_URL="https://www.centos.org/"
[2026-01-29 03:50:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 03:50:00] 
[2026-01-29 03:50:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 03:50:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 03:50:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 03:50:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 03:50:00] 
[2026-01-29 03:50:00] 2026-01-29 02:49:23,299 | INFO     | **************************************
[2026-01-29 03:50:00] 2026-01-29 02:49:23,802 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-29 03:50:00] 2026-01-29 02:49:23,820 | INFO     | sufficient remaining disk space (491984519168 B)
[2026-01-29 03:50:00] 2026-01-29 02:49:23,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 03:50:00] 2026-01-29 02:49:23,821 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 03:50:00] 2026-01-29 02:49:23,821 | INFO     | update_server=False
[2026-01-29 03:50:00] 2026-01-29 02:49:23,821 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 03:50:00] 2026-01-29 02:49:23,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 03:50:00] 2026-01-29 02:49:24,068 | INFO     | all job control threads have been joined
[2026-01-29 03:50:00] 2026-01-29 02:49:24,450 | INFO     | all payload control threads have been joined
[2026-01-29 03:50:00] 2026-01-29 02:49:24,675 | INFO     | all data control threads have been joined
[2026-01-29 03:50:00] 2026-01-29 02:49:24,726 | WARNING  | process 411 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 03:50:00] 2026-01-29 02:49:24,777 | INFO     | using path: /var/lib/boinc/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 03:50:00] 2026-01-29 02:49:24,778 | INFO     | using path: /var/lib/boinc/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 03:50:00] 2026-01-29 02:49:24,778 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-29 03:50:00] 2026-01-29 02:49:24,778 | WARNING  | maxPSS not found in memory monitor output
[2026-01-29 03:50:00] 2026-01-29 02:49:24,827 | INFO     | [job] retrieve thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:24,839 | INFO     | number of running child processes to parent process 411: 1
[2026-01-29 03:50:00] 2026-01-29 02:49:24,839 | INFO     | maximum number of monitored processes: 8
[2026-01-29 03:50:00] 2026-01-29 02:49:24,839 | INFO     | aborting job monitoring since job object (job id=6985347526) has expired
[2026-01-29 03:50:00] 2026-01-29 02:49:24,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 03:50:00] 2026-01-29 02:49:24,840 | INFO     | will abort loop
[2026-01-29 03:50:00] 2026-01-29 02:49:24,899 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:25,074 | INFO     | [job] control thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:25,123 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:25,178 | INFO     | [data] copytool_in thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:25,244 | INFO     | [job] validate thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:25,456 | INFO     | [payload] control thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:25,544 | INFO     | [payload] failed_post thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:25,681 | INFO     | [data] control thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:25,827 | INFO     | [data] copytool_out thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:25,845 | INFO     | [job] job monitor thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:25,983 | INFO     | [payload] validate_post thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:26,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 03:50:00] 2026-01-29 02:49:26,093 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:26,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 03:50:00] 2026-01-29 02:49:27,669 | INFO     | [job] queue monitor thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:30,078 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:34,221 | INFO     | job.realtimelogging is not enabled
[2026-01-29 03:50:00] 2026-01-29 02:49:35,223 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 03:50:00] 2026-01-29 02:49:53,764 | INFO     | PID=28424 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 03:50:00] 2026-01-29 02:49:53,765 | INFO     | .. there are 2 such processes running
[2026-01-29 03:50:00] 2026-01-29 02:49:53,766 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 03:50:00] 2026-01-29 02:49:53,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 03:50:00] 2026-01-29 02:49:53,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 03:50:00] 2026-01-29 02:49:54,513 | INFO     | [monitor] cgroup control has ended
[2026-01-29 03:50:00] 2026-01-29 02:49:54,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140529198507840)>', '<ExcThread(monitor, started 140528301631232)>']
[2026-01-29 03:50:00] 2026-01-29 02:49:55,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 03:50:00] 2026-01-29 02:49:55,775 | INFO     | [monitor] control thread has ended
[2026-01-29 03:50:00] 2026-01-29 02:50:00,014 | INFO     | all workflow threads have been joined
[2026-01-29 03:50:00] 2026-01-29 02:50:00,015 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 03:50:00] 2026-01-29 02:50:00,015 | INFO     | traces error code: 0
[2026-01-29 03:50:00] 2026-01-29 02:50:00,015 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 03:50:00] 2026-01-29 02:50:00,149 [wrapper] ==== pilot stdout END ====
[2026-01-29 03:50:00] 2026-01-29 02:50:00,154 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 03:50:00] 2026-01-29 02:50:00,158 [wrapper] pilotpid: 28424
[2026-01-29 03:50:00] 2026-01-29 02:50:00,163 [wrapper] Pilot exit status: 0
[2026-01-29 03:50:00] 2026-01-29 02:50:00,184 [wrapper] pandaids: 6985347526
[2026-01-29 03:50:00] 2026-01-29 02:50:00,220 [wrapper] cleanup supervisor_pilot  8001 28425
[2026-01-29 03:50:00] 2026-01-29 02:50:00,225 [wrapper] Test setup, not cleaning
[2026-01-29 03:50:00] 2026-01-29 02:50:00,229 [wrapper] apfmon messages muted
[2026-01-29 03:50:00] 2026-01-29 02:50:00,232 [wrapper] ==== wrapper stdout END ====
[2026-01-29 03:50:00] 2026-01-29 02:50:00,236 [wrapper] ==== wrapper stderr END ====
[2026-01-29 03:50:00]  *** Error codes and diagnostics ***
[2026-01-29 03:50:00]     "exeErrorCode": 0,
[2026-01-29 03:50:00]     "exeErrorDiag": "",
[2026-01-29 03:50:00]     "pilotErrorCode": 0,
[2026-01-29 03:50:00]     "pilotErrorDiag": "",
[2026-01-29 03:50:00]  *** Listing of results directory ***
[2026-01-29 03:50:00] total 671072
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc    584422 Jan 28 13:23 pilot3.tar.gz
[2026-01-29 03:50:00] -rwx------. 1 boinc boinc     36322 Jan 28 13:28 runpilot2-wrapper.sh
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc      5111 Jan 28 13:32 queuedata.json
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc       100 Jan 29 00:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 03:50:00] -rwxr-xr-x. 1 boinc boinc      7986 Jan 29 00:40 run_atlas
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc       105 Jan 29 00:40 job.xml
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc      6389 Jan 29 00:40 init_data.xml
[2026-01-29 03:50:00] -rw-r--r--. 2 boinc boinc 501439077 Jan 29 00:40 EVNT.48317869._000099.pool.root.1
[2026-01-29 03:50:00] -rw-r--r--. 2 boinc boinc     15845 Jan 29 00:40 start_atlas.sh
[2026-01-29 03:50:00] drwxrwx--x. 2 boinc boinc        68 Jan 29 00:40 shared
[2026-01-29 03:50:00] -rw-r--r--. 2 boinc boinc    597758 Jan 29 00:40 input.tar.gz
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc         0 Jan 29 00:40 boinc_lockfile
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc      2514 Jan 29 00:41 pandaJob.out
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc       415 Jan 29 00:47 workernode_map.json
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc   1005755 Jan 29 00:47 agis_schedconf.cvmfs.json
[2026-01-29 03:50:00] drwx------. 5 boinc boinc      4096 Jan 29 00:47 pilot3
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc 177840107 Jan 29 03:48 HITS.48317872._004942.pool.root.1
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc       532 Jan 29 03:48 boinc_task_state.xml
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc      1010 Jan 29 03:49 memory_monitor_summary.json
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc   1516246 Jan 29 03:49 agis_ddmendpoints.agis.ALL.json
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc    425441 Jan 29 03:49 log.48317872._004942.job.log.tgz.1
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc      6315 Jan 29 03:49 heartbeat.json
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc      8192 Jan 29 03:49 boinc_mmap_file
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc        28 Jan 29 03:49 wrapper_checkpoint.txt
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc        95 Jan 29 03:49 pilot_heartbeat.json
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc      5788 Jan 29 03:50 pilotlog.txt
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc   1563456 Jan 29 03:50 log.48317872._004942.job.log.1
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc       357 Jan 29 03:50 output.list
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc       620 Jan 29 03:50 runtime_log
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc   2007040 Jan 29 03:50 result.tar.gz
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc       654 Jan 29 03:50 SyPMDmgpJ58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUsFKDmukVTVo.diag
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc      8816 Jan 29 03:50 runtime_log.err
[2026-01-29 03:50:00] -rw-r--r--. 1 boinc boinc     20901 Jan 29 03:50 stderr.txt
[2026-01-29 03:50:00] HITS file was successfully produced:
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc 177840107 Jan 29 03:48 shared/HITS.pool.root.1
[2026-01-29 03:50:00]  *** Contents of shared directory: ***
[2026-01-29 03:50:00] total 665920
[2026-01-29 03:50:00] -rw-r--r--. 2 boinc boinc 501439077 Jan 29 00:40 ATLAS.root_0
[2026-01-29 03:50:00] -rw-r--r--. 2 boinc boinc     15845 Jan 29 00:40 start_atlas.sh
[2026-01-29 03:50:00] -rw-r--r--. 2 boinc boinc    597758 Jan 29 00:40 input.tar.gz
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc 177840107 Jan 29 03:48 HITS.pool.root.1
[2026-01-29 03:50:00] -rw-------. 1 boinc boinc   2007040 Jan 29 03:50 result.tar.gz
03:50:01 (24324): run_atlas exited; CPU time 55320.564200
03:50:01 (24324): called boinc_finish(0)

</stderr_txt>
]]>

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